#Species SRR12117916 SRR12117917 SRR12117918 SRR12117919 SRR12117920 SRR12117921 SRR12117922 SRR12117923 SRR12117924 SRR12117925 SRR12117926 SRR12117927 SRR12117928 SRR12117929 SRR12117930 SRR12117931 SRR12117932 SRR12117933 SRR12117934 SRR12117935 SRR12117936 SRR12117937 SRR12117938 SRR12117939 SRR12117940 SRR12117941 SRR12117942 SRR12117943 SRR12117944 SRR12117945 SRR12117946 SRR12117947 SRR12117948 SRR12117949 SRR12117950 SRR12117951 SRR12117952 SRR12117953 SRR12117954 SRR12117955 SRR12117956 SRR12117957 Veillonella sp. HMT780 (SP1) 378 1786 78 215 844 735 1257 1016 591 331 19 70 635 513 537 523 345 160 386 1424 1104 360 1029 265 650 1199 2630 2608 443 263 721 128 482 224 2106 780 996 181 12 719 244 678 Porphyromonas sp. HMT275 (SP10) 30 0 0 0 100 16 12 12 0 6 0 0 0 0 53 0 0 53 34 0 0 9 0 11 18 0 15 0 0 0 17 0 80 12 20 0 0 0 0 0 0 0 Aggregatibacter sp. HMT513 (SP101) 80 56 6 0 0 0 66 167 17 0 0 74 0 0 0 0 0 77 279 0 35 9 113 34 12 0 21 13 7 15 12 6 0 0 30 61 9 0 0 9 7 13 Corynebacterium matruchotii (SP103) 253 95 0 394 1198 116 186 134 0 24 30 34 10 35 53 19 10 0 26 181 90 213 707 54 47 57 79 78 64 16 672 174 48 11 42 29 17 0 0 14 0 350 Treponema socranskii (SP104) 37 10 0 12 43 0 5 7 0 0 0 0 0 0 0 0 0 0 6 50 0 2 35 4 0 0 0 0 0 0 112 55 0 0 0 0 0 18 9 0 0 17 Haemophilus sp. HMT908 (SP108) 0 0 0 0 0 0 0 359 0 17 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Selenomonas sp. HMT126 (SP110) 28 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 5 8 34 15 0 0 11 0 0 0 0 0 55 42 0 0 0 0 0 18 0 0 0 46 Veillonella parvula (SP113) 278 17 15 253 1580 8 0 0 0 1 0 9 0 139 31 3 0 49 93 300 29 31 1193 8 221 14 10 0 11 5 461 266 3 0 1 23 220 149 80 10 0 426 Treponema denticola (SP115) 21 0 0 0 58 5 0 0 0 0 7 0 0 0 0 0 0 0 0 0 24 0 17 0 0 0 0 0 0 0 92 35 0 0 0 0 0 0 8 0 0 0 Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP116) 0 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 15 4 0 0 0 0 80 160 0 0 0 18 0 33 15 0 0 0 Selenomonas dianae (SP118) 54 0 0 0 105 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 199 383 0 0 15 0 0 0 0 0 0 67 Alloprevotella sp. HMT308 (SP119) 0 0 6 115 39 13 37 27 0 4 32 64 61 0 0 101 0 206 120 0 0 0 0 0 0 0 10 0 61 8 10 0 267 54 19 238 192 0 4 41 13 8 Prevotella sp. HMT942 (SP120) 39 149 9 0 23 435 153 20 343 0 0 19 0 12 0 6 22 41 16 13 32 41 104 98 0 77 424 106 103 0 0 0 0 36 783 21 129 9 0 0 0 193 Gemella morbillorum (SP126) 589 67 0 86 499 60 205 132 75 34 468 279 10 13 25 35 0 29 80 45 165 49 183 55 2040 2804 0 17 20 0 1244 420 163 41 894 36 90 112 112 61 25 257 Prevotella scopos (SP129) 0 0 0 0 0 0 0 62 0 0 0 0 9 0 64 0 0 12 60 0 0 0 0 0 0 0 0 0 32 12 0 0 6 0 1 44 17 0 8 0 0 0 Capnocytophaga leadbetteri (SP13) 296 53 38 129 384 108 149 0 0 59 58 93 15 67 234 87 32 93 173 176 73 42 76 178 326 460 67 51 32 0 315 71 55 2 317 306 77 34 71 0 0 325 Streptococcus intermedius (SP131) 29 0 0 208 60 0 0 33 0 0 129 56 0 46 16 16 0 0 25 51 0 11 130 0 31 0 0 0 0 0 146 75 81 9 0 0 0 0 0 0 0 0 Selenomonas noxia (SP132) 8 38 27 79 82 12 0 0 0 0 5 0 0 14 8 0 0 0 28 214 53 72 100 10 0 19 0 0 0 0 170 83 18 0 0 0 0 20 19 0 0 116 Neisseria lactamica (SP134) 0 0 0 0 0 0 0 468 303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Simonsiella muelleri (SP137) 0 1710 93 0 0 119 404 25 10 0 0 0 0 0 70 294 34 0 0 0 0 0 0 0 0 0 0 0 0 0 125 0 5 0 0 119 67 0 0 0 0 0 Actinomyces graevenitzii (SP138) 11 71 0 358 0 672 2187 336 66 61 54 263 64 0 44 124 0 7 0 33 108 0 59 0 41 90 0 0 58 32 0 0 550 212 29 355 135 15 0 122 13 24 Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP139) 187 22 0 95 218 0 0 0 0 0 15 0 0 11 0 0 0 11 58 153 51 67 33 0 73 101 11 0 0 0 35 51 17 0 7 0 0 225 72 0 0 255 Rothia mucilaginosa (SP14) 416 4186 573 6545 178 1038 1859 951 155 590 4150 4199 301 5427 4920 3281 119 153 237 1927 1425 1083 268 65 2121 967 694 372 899 172 1139 357 3370 1656 293 2838 3312 4974 4472 213 242 466 Selenomonas sputigena (SP140) 120 0 0 34 234 0 0 13 8 0 0 0 0 0 0 0 0 0 20 50 20 30 127 15 61 23 9 0 5 0 382 305 10 0 12 11 0 21 0 0 0 301 Prevotella melaninogenica (SP142) 1090 538 561 1881 760 635 1679 1638 1003 722 1815 3873 1003 637 771 3147 24 1425 8999 86 445 48 482 108 1396 2436 523 289 2362 530 3405 1580 878 394 2163 2302 6041 174 479 709 640 2549 Corynebacterium durum (SP144) 94 21 0 37 65 39 102 66 9 51 130 208 11 47 33 27 0 9 0 337 232 73 168 29 0 0 33 158 136 71 58 0 60 18 0 15 6 0 0 0 0 126 Aggregatibacter sp. HMT898 (SP146) 258 51 0 0 0 58 43 0 0 0 0 0 0 0 42 0 0 0 0 0 0 30 369 0 0 0 7 15 0 0 54 11 77 0 0 33 0 0 0 0 0 95 Alloprevotella sp. HMT914 (SP148) 52 55 0 0 0 154 141 41 105 22 0 4 0 20 23 49 11 5 40 20 27 0 148 40 78 54 11 30 53 15 37 0 32 0 21 102 72 0 0 10 17 23 Leptotrichia sp. HMT392 (SP15) 179 31 0 0 52 24 33 0 0 0 19 22 0 16 28 0 0 0 0 118 71 0 177 16 71 130 0 20 0 0 27 0 0 0 39 0 0 0 0 0 0 128 Leptotrichia sp. HMT215 (SP151) 27 37 81 0 272 67 193 121 108 69 56 49 99 89 284 96 0 15 32 106 0 0 152 336 0 0 0 25 46 0 180 80 166 0 22 234 184 17 18 17 35 39 Alloprevotella sp. HMT912 (SP155) 90 0 0 0 28 0 14 7 0 0 8 13 0 0 0 0 0 0 14 22 0 0 10 0 9 0 0 0 0 0 42 15 48 0 20 0 0 0 0 0 0 4 Veillonella atypica (SP156) 108 0 246 2252 160 0 113 893 739 0 243 310 194 122 181 738 0 395 379 0 7 0 36 27 0 0 0 0 141 153 17 0 768 315 209 752 1706 75 92 143 24 369 Prevotella denticola (SP159) 0 0 0 32 179 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 102 0 14 8 0 0 0 0 44 9 27 0 0 33 0 24 7 0 0 50 Alloprevotella sp. HMT473 (SP16) 2904 6331 297 172 316 7864 3624 111 363 902 10 664 877 463 385 926 409 1350 2050 1098 663 1025 1074 5501 345 640 1298 6120 2394 685 2767 99 1911 882 9758 4316 2974 35 0 3150 1123 4256 Prevotella sp. HMT317 (SP160) 71 12 10 0 141 0 51 0 0 0 64 0 0 15 0 0 0 0 9 84 0 0 20 352 0 0 55 0 0 0 52 88 25 0 93 0 0 0 0 0 0 34 Leptotrichia hongkongensis (SP162) 43 0 38 1645 485 0 0 29 22 25 27 61 0 0 0 103 0 16 32 42 29 62 102 18 36 12 0 10 0 0 86 46 282 82 27 0 51 0 0 0 0 86 Lachnospiraceae_[G-3] bacterium HMT100 (SP163) 23 9 0 0 18 30 44 0 0 3 5 0 0 19 25 3 5 0 0 53 35 0 51 37 10 28 0 3 6 0 35 14 0 0 5 0 0 4 8 0 0 10 Gracilibacteria_(GN02)_[G-2] bacterium HMT873 (SP169) 31 0 0 0 0 15 16 0 0 0 0 0 0 4 27 0 0 0 0 7 0 18 20 46 0 0 0 0 0 0 2 7 0 0 15 0 0 0 0 0 0 47 Porphyromonas endodontalis (SP172) 20 160 0 0 51 18 28 0 0 21 0 0 0 0 0 8 0 0 65 0 0 0 37 0 10 33 10 0 0 3 542 299 0 0 66 0 4 48 16 0 0 0 Actinomyces oris (SP173) 66 0 0 58 0 30 0 56 0 66 92 206 39 67 0 0 0 106 47 140 97 36 509 0 36 38 0 23 304 282 161 18 89 0 33 0 0 59 21 0 0 42 Neisseria elongata (SP174) 555 0 12 93 324 127 168 117 47 21 21 53 4 57 215 50 15 1 21 344 79 21 355 1704 6 10 112 69 15 0 368 57 390 26 39 64 17 20 7 10 0 112 Selenomonas sp. HMT388 (SP178) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 441 93 0 0 0 0 0 0 0 0 0 0 Capnocytophaga sp. HMT412 (SP18) 0 17 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 67 0 0 0 0 0 0 0 0 0 0 0 Prevotella nanceiensis (SP184) 721 89 32 141 242 967 450 197 13 311 60 99 215 163 100 297 26 644 1119 106 183 111 128 19 322 669 1301 370 248 41 342 54 414 632 523 1084 559 17 49 154 58 721 Saccharibacteria_(TM7)_[G-1] bacterium HMT952 (SP186) 181 0 0 6 23 0 0 0 0 0 0 0 0 58 0 0 0 0 0 0 28 0 12 0 2 4 0 0 0 0 137 59 58 0 31 17 1 0 0 0 0 31 Dialister invisus (SP188) 34 36 2 36 234 9 19 0 0 0 16 16 0 0 0 0 0 0 21 0 5 2 254 0 51 78 0 0 0 6 275 110 15 0 0 57 26 32 15 6 0 84 Neisseria oralis (SP189) 1055 221 21 0 2064 154 106 0 435 0 0 2 0 1 83 358 4 3 20 239 81 8 197 110 180 0 245 102 3 16 163 21 62 0 147 0 0 40 19 0 0 1450 Fusobacterium sp. HMT203 (SP191) 97 129 0 0 0 21 39 0 0 0 20 39 0 0 0 0 0 0 10 341 780 0 0 0 0 0 0 22 0 0 56 13 0 0 12 0 0 0 0 0 0 29 Weeksellaceae_[G-1] sp. HMT931 (SP192) 21 112 17 0 0 83 54 53 56 245 0 36 16 44 54 140 0 26 0 12 25 33 54 28 0 0 300 300 43 71 22 0 36 10 85 37 15 0 0 0 0 15 Prevotella veroralis (SP195) 27 64 0 162 256 0 0 0 0 0 20 0 0 0 0 0 0 0 25 0 0 0 32 0 92 41 0 0 0 0 135 67 14 0 0 0 0 0 0 26 0 149 Aggregatibacter sp. HMT458 (SP196) 16 21 0 204 243 108 250 85 21 48 42 9 0 0 0 0 0 153 94 0 159 32 118 33 21 21 57 12 15 31 84 11 506 88 282 0 12 0 0 64 0 25 Granulicatella elegans (SP2) 870 1891 53 214 262 1976 1859 2254 543 1033 87 1486 213 1210 550 2558 861 921 910 626 3362 955 545 9 3103 2059 1196 2287 827 804 1160 217 1730 169 708 1656 1351 1226 366 434 210 752 Leptotrichia sp. HMT223 (SP20) 0 0 0 92 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 24 0 0 0 0 38 29 0 0 0 0 0 0 0 0 0 0 Haemophilus haemolyticus (SP218) 103 98 0 146 282 235 276 93 47 534 0 0 443 56 8 61 42 21 43 61 162 131 201 1657 15 0 373 191 20 0 333 16 22 0 353 0 0 10 0 25 26 29 Selenomonas sp. HMT137 (SP219) 8 0 0 32 56 0 0 0 6 0 0 0 0 0 5 0 0 0 0 110 32 0 82 13 0 0 0 0 0 0 0 4 0 0 21 0 0 0 0 0 0 0 Actinomyces massiliensis (SP220) 0 0 0 15 53 12 0 0 0 0 21 10 0 0 0 0 0 0 0 0 13 44 43 0 0 0 25 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 Campylobacter gracilis (SP221) 47 0 10 211 303 40 0 0 0 5 9 15 0 0 8 0 0 0 0 783 31 27 124 10 0 0 0 10 0 0 166 39 31 0 26 7 0 42 10 0 0 50 Prevotella jejuni (SP222) 0 0 0 660 0 0 75 297 51 0 38 46 165 21 0 84 0 31 87 0 0 0 0 0 0 0 0 0 12 0 0 0 46 0 0 77 207 0 81 32 0 0 Aggregatibacter paraphrophilus (SP228) 0 0 0 0 0 0 21 0 0 8 68 6 0 0 0 32 12 0 0 44 0 98 164 0 6 0 38 38 0 0 0 0 40 0 0 0 0 0 0 0 0 0 Aggregatibacter aphrophilus (SP229) 0 0 0 0 0 215 66 0 0 0 0 0 0 0 21 0 12 0 41 15 25 0 0 0 0 29 48 21 0 0 0 0 182 0 0 0 50 0 0 0 0 0 Streptococcus gordonii (SP23) 553 0 0 878 2219 0 0 40 0 64 320 0 33 0 0 0 0 35 22 0 0 43 143 38 398 1471 0 0 0 0 1360 569 185 0 66 0 0 693 252 41 0 332 Prevotella nigrescens (SP230) 79 11 0 15 20 0 5 0 0 0 12 33 0 0 0 0 0 10 9 22 0 0 30 0 0 62 13 0 10 0 39 70 0 0 21 0 7 0 27 0 0 122 Cloacibacterium sp. HMT206 (SP231) 139 1649 0 0 0 90 17 0 6 0 0 0 0 217 346 826 57 337 501 17 374 0 179 808 0 3 5155 1348 0 65 760 27 0 154 1305 489 139 74 5 19 0 546 Neisseria subflava (SP232) 99 0 0 0 0 16 759 0 10 0 707 19 19 88 463 685 26 32 168 120 439 178 246 388 121 280 28 9 24 20 616 124 0 0 2239 8 436 0 0 13 22 752 Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP233) 0 0 0 0 102 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 65 0 0 0 0 0 0 0 268 88 0 0 0 0 0 93 65 0 0 0 Leptotrichia sp. HMT212 (SP239) 99 80 25 0 43 42 0 46 0 0 0 0 0 28 294 40 0 28 35 55 35 100 259 0 91 100 28 0 0 0 21 0 0 37 15 73 34 0 18 0 0 82 Schaalia sp. HMT172 (SP24) 0 569 0 303 0 233 662 986 266 0 0 148 0 0 51 0 0 0 0 0 0 0 209 0 67 0 0 19 197 0 0 0 434 60 0 0 291 70 0 0 0 67 Capnocytophaga sputigena (SP240) 325 72 111 151 198 186 140 70 17 26 71 90 0 65 244 46 0 99 133 508 221 106 392 139 86 80 52 35 30 15 167 0 196 37 54 58 30 0 34 9 0 502 Prevotella salivae (SP242) 293 0 69 338 565 7 81 96 131 7 61 283 20 20 11 68 0 205 280 0 0 17 45 0 365 33 0 0 46 25 500 390 137 76 33 137 295 0 87 94 58 488 Veillonella dispar (SP243) 776 98 743 6627 6436 212 576 1703 635 89 1834 2795 346 1339 1277 3333 21 1326 2406 968 201 209 1246 1251 709 788 59 75 657 103 4982 1619 4478 1241 380 3086 2662 1545 1306 423 136 1148 Cardiobacterium hominis (SP244) 89 17 21 107 254 12 28 6 5 0 33 27 0 53 48 21 0 14 26 154 100 40 481 43 43 32 68 79 7 0 225 38 113 8 11 11 5 31 48 0 0 68 Pseudostreptobacillus hongkongensis (SP245) 23 0 0 0 0 180 192 310 544 123 24 10 78 0 17 31 0 0 29 16 150 7 0 0 0 0 213 13 53 0 0 0 0 0 0 0 0 0 0 0 0 212 Streptococcus sanguinis (SP246) 903 49 0 564 2023 118 324 818 158 130 1351 985 67 220 692 263 0 44 185 2289 544 149 501 563 289 77 102 115 54 54 925 453 851 143 164 222 96 156 231 43 0 288 Haemophilus paraphrohaemolyticus (SP247) 0 0 0 37 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 89 0 0 0 0 186 63 0 0 0 0 0 0 155 781 0 0 0 41 0 0 Haemophilus parahaemolyticus (SP248) 0 703 18 391 34 1717 4776 645 594 883 0 0 1156 91 125 492 0 303 312 0 56 0 20 0 0 0 765 132 79 0 64 18 939 65 1001 151 56 0 8 38 0 236 Leptotrichia sp. HMT225 (SP249) 120 100 0 51 118 90 30 0 0 0 30 0 0 110 228 58 18 37 0 46 0 0 205 79 122 327 15 51 0 0 217 54 87 0 33 0 64 0 0 0 0 92 Veillonella rogosae (SP25) 25 598 630 5449 668 439 1115 98 29 302 324 342 126 559 1565 1562 17 17 336 691 142 23 287 256 913 2402 303 270 485 76 472 119 2 2 71 1112 509 21 0 243 226 298 Streptococcus pyogenes (SP253) 0 0 0 0 0 0 0 6 0 0 13 8 0 0 0 134 0 0 0 0 159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Neisseria cinerea (SP255) 392 314 0 119 16 778 917 114 10 19 0 25 0 139 154 428 244 489 241 20 760 1424 20 1001 163 72 3451 1140 27 0 665 12 895 0 1601 213 188 0 0 95 87 212 Prevotella shahii (SP256) 0 192 115 0 0 151 727 41 58 69 0 42 32 0 66 29 13 0 22 0 44 0 23 0 384 397 0 28 187 29 0 0 0 0 0 113 46 0 0 12 8 0 Capnocytophaga gingivalis (SP258) 142 27 51 176 414 44 56 22 0 44 24 0 17 0 50 29 0 48 42 177 130 106 131 67 102 187 19 41 23 0 148 19 111 16 0 14 0 46 31 0 0 135 Prevotella sp. HMT443 (SP26) 0 36 0 0 0 13 79 0 0 0 0 0 4 0 0 0 0 0 5 2 8 0 23 0 0 23 0 0 0 0 149 46 0 0 0 0 0 0 0 0 0 0 Streptococcus thermophilus (SP260) 325 0 0 0 0 0 0 0 0 0 0 0 0 6372 12175 298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 904 Leptotrichia sp. HMT218 (SP262) 0 0 0 0 0 8 183 7 22 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 115 39 400 138 0 0 0 0 0 0 0 58 0 0 Lachnoanaerobaculum orale (SP264) 0 0 10 129 47 0 37 62 36 0 16 131 0 36 60 35 0 0 16 0 0 0 0 13 11 0 0 0 12 0 153 30 10 21 0 28 95 30 34 21 0 16 Prevotella sp. HMT475 (SP265) 183 0 0 0 109 15 0 0 0 0 5 0 0 0 6 0 0 0 0 20 16 0 19 33 13 28 0 11 0 0 256 19 29 0 186 0 0 7 5 0 0 67 Capnocytophaga sp. HMT878 (SP266) 0 0 0 0 0 17 17 0 0 0 0 0 0 0 0 0 0 0 0 231 0 22 63 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Fusobacterium hwasookii (SP267) 319 0 0 0 0 237 86 0 0 0 0 0 0 0 87 0 0 0 23 152 0 59 156 0 0 113 0 75 0 0 115 47 55 0 8 51 42 0 1 0 0 123 Johnsonella ignava (SP27) 8 5 0 0 28 15 9 0 0 0 5 18 0 7 0 0 0 0 0 115 41 0 0 0 0 6 18 10 0 0 0 0 0 0 9 0 0 0 0 0 0 10 Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP271) 29 0 0 13 39 23 61 26 26 0 15 12 11 5 0 0 0 0 78 0 0 7 13 0 36 63 0 0 24 8 47 42 43 12 18 14 17 7 28 8 0 56 Schaalia sp. HMT180 (SP277) 31 78 0 121 95 519 1304 210 57 161 319 706 366 20 57 99 0 40 234 173 160 22 103 18 166 468 32 0 248 128 99 14 350 102 74 97 139 97 65 88 115 22 Prevotella sp. HMT306 (SP278) 163 0 0 0 46 22 621 74 277 0 66 170 0 0 0 80 0 0 0 0 0 30 16 0 0 0 16 0 65 0 0 0 0 120 48 0 90 0 28 45 56 101 Prevotella vespertina (SP279) 0 0 0 0 0 16 598 30 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85 136 0 46 0 0 0 0 0 0 0 0 0 0 Porphyromonas sp. HMT278 (SP285) 41 28 11 0 11 8 9 9 19 0 0 0 0 0 14 22 7 63 392 16 8 19 84 24 781 452 7 0 0 0 80 40 306 59 416 34 179 0 12 0 12 65 Haemophilus pittmaniae (SP287) 19 115 0 13 18 0 70 0 0 478 0 0 144 203 284 228 0 0 83 0 0 0 0 0 0 0 91 57 0 0 103 0 0 0 0 0 66 0 0 132 28 0 Saccharibacteria_(TM7)_[G-1] bacterium HMT869 (SP29) 0 0 0 8 137 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 22 0 0 13 0 0 13 0 0 0 0 Kingella denitrificans (SP290) 50 80 22 0 95 13 43 102 12 0 203 51 13 21 13 17 0 14 10 312 22 0 264 0 0 0 171 88 0 0 24 0 780 186 0 9 0 11 0 0 0 0 Kingella sp. HMT012 (SP291) 0 0 0 0 0 6 2 0 9 2 0 0 0 0 0 18 0 0 13 108 14 0 1 0 0 0 2 0 0 0 1 4 15 14 0 0 0 0 0 0 0 0 Prevotella maculosa (SP292) 94 12 0 57 265 17 6 25 0 0 0 15 0 0 0 0 0 0 0 22 21 14 51 17 3 0 11 21 0 0 133 102 11 4 0 0 0 0 0 0 0 109 Ruminococcaceae_[G-2] bacterium HMT085 (SP298) 12 34 19 116 33 14 40 53 43 28 24 15 14 6 31 18 4 4 36 22 11 5 57 22 82 131 4 4 47 16 97 56 43 29 69 71 54 0 10 27 9 25 Megasphaera micronuciformis (SP299) 121 0 0 461 653 33 281 183 129 0 20 46 28 5 0 0 0 62 25 0 0 0 17 0 88 9 0 0 6 17 396 217 101 57 30 50 185 23 10 33 36 202 Porphyromonas pasteri (SP3) 2112 1489 459 125 450 2186 2727 691 335 880 1161 424 479 1298 978 4220 196 1249 1887 470 957 182 648 204 703 3648 1970 2425 744 622 901 163 1276 212 1722 4567 3482 32 134 370 224 3233 Capnocytophaga endodontalis (SP30) 24 0 22 0 102 0 0 0 0 0 13 30 0 7 19 0 0 0 0 0 0 0 124 0 0 17 13 17 0 0 138 29 14 9 24 0 0 2 0 0 0 38 Riemerella sp. HMT322 (SP301) 151 146 87 124 130 89 183 55 9 69 41 50 27 131 226 229 26 28 60 228 89 41 360 119 77 117 85 54 84 16 114 42 211 38 48 126 57 18 21 0 19 236 Arachnia propionica (SP302) 27 0 9 0 7 15 10 20 3 0 18 5 0 9 10 2 0 0 10 259 133 0 35 7 110 28 28 12 0 0 0 11 12 0 0 8 0 0 0 0 0 6 Treponema vincentii (SP304) 27 14 0 0 0 0 25 0 4 0 0 0 0 0 0 0 0 0 0 70 22 14 0 0 0 0 0 0 0 0 91 0 0 0 31 0 0 0 0 0 0 0 Lautropia mirabilis (SP305) 585 47 89 329 1452 397 501 1650 390 88 592 610 41 373 600 444 11 303 400 1974 846 266 634 264 91 49 821 406 43 26 365 17 1306 358 201 278 65 6 21 16 0 412 Streptococcus parasanguinis_clade_411 (SP309) 0 0 0 2619 245 0 0 44 19 0 706 250 7 624 178 223 0 123 183 0 0 0 0 0 0 0 0 0 23 0 23 10 488 180 92 183 50 223 403 81 0 89 Treponema sp. HMT237 (SP31) 30 28 5 8 0 0 0 0 0 5 0 8 0 0 0 0 0 0 24 60 0 0 85 0 5 10 0 0 0 0 97 0 0 0 0 0 0 0 0 0 0 18 Gracilibacteria_(GN02)_[G-1] bacterium HMT872 (SP312) 141 0 0 18 0 8 19 0 0 0 0 0 0 13 0 0 0 0 0 8 12 0 0 46 46 83 49 30 0 0 85 38 28 14 0 6 0 24 72 5 0 152 Leptotrichia hofstadii (SP313) 0 0 0 83 94 30 51 57 0 28 29 12 0 29 20 30 0 0 57 0 116 30 0 0 65 44 0 0 0 0 174 20 47 0 0 28 79 0 0 0 0 0 Dialister pneumosintes (SP314) 0 12 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 25 0 0 0 0 0 0 0 141 190 0 0 0 0 0 5 0 0 0 0 Catonella morbi (SP317) 0 61 72 40 34 36 217 154 39 56 0 26 19 9 34 35 0 17 45 30 0 5 60 0 33 44 0 10 11 10 0 0 33 9 23 0 35 0 6 29 35 0 Lachnospiraceae_[G-2] bacterium HMT096 (SP318) 12 0 12 0 130 18 278 233 138 0 0 8 0 32 46 29 0 0 5 0 12 0 55 0 0 0 0 0 8 11 25 51 0 0 0 0 0 0 0 9 0 20 Haemophilus parainfluenzae (SP32) 2000 2414 542 4238 1632 1551 2111 793 138 953 2711 3714 215 1881 1689 2979 174 1403 3735 431 678 485 1229 2579 715 1233 1338 700 794 310 1823 128 2720 1435 643 2269 1133 98 247 326 99 1621 Bacteroidetes_[G-5] bacterium HMT511 (SP320) 53 28 0 16 51 0 10 0 0 2 0 0 0 0 0 0 0 0 5 0 0 0 144 0 6 5 0 0 0 0 13 19 0 0 0 0 0 0 0 0 0 39 Treponema sp. HMT231 (SP322) 0 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 92 12 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 19 Ruminococcaceae_[G-1] bacterium HMT075 (SP327) 287 136 0 49 107 64 390 98 373 10 0 0 16 34 90 11 0 27 98 13 101 33 137 0 458 331 12 38 22 59 680 534 86 10 36 39 34 12 25 18 16 258 Selenomonas flueggei (SP339) 9 0 0 8 74 0 0 0 0 0 0 0 0 0 10 0 0 0 0 43 0 12 0 6 6 0 0 0 0 0 18 0 19 10 11 0 0 0 0 0 0 0 Streptococcus anginosus (SP36) 138 0 0 0 132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 19 100 0 14 0 0 0 0 0 168 82 0 0 14 0 0 1298 109 0 0 69 Peptidiphaga sp. HMT183 (SP363) 9 0 0 139 47 6 0 0 0 11 6 11 0 0 0 0 0 0 0 3 0 0 85 0 0 0 0 0 0 0 15 65 9 3 0 0 0 5 0 0 0 5 Rothia dentocariosa (SP37) 197 0 0 490 124 73 175 229 53 101 111 123 117 76 0 343 0 0 13 33 0 0 136 0 102 15 0 0 150 45 132 80 821 99 13 60 95 37 11 37 58 153 Absconditabacteria_(SR1)_[G-1] bacterium HMT874 (SP373) 350 62 0 0 78 0 153 0 0 0 0 22 0 0 37 8 0 0 38 138 40 15 34 10 0 53 0 0 0 0 97 37 24 3 41 167 0 0 16 0 0 114 Actinomyces sp. HMT169 (SP376) 37 0 0 66 0 102 0 0 0 147 0 74 74 0 0 0 0 0 0 217 67 0 218 71 0 0 0 0 0 0 38 0 69 0 0 0 0 0 0 0 0 0 Kingella oralis (SP377) 6 6 0 199 207 8 2 23 0 7 41 9 0 12 0 0 0 18 2 154 46 7 281 72 11 4 12 67 28 20 80 10 104 34 27 6 0 36 0 0 0 11 Leptotrichia trevisanii (SP378) 460 92 0 66 10 17 12 46 0 0 0 0 0 0 0 74 29 0 0 338 154 29 133 21 44 55 75 131 0 0 25 26 229 15 38 13 0 0 0 0 0 63 Prevotella baroniae (SP379) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 324 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp. HMT498 (SP382) 820 51 3 0 1222 0 0 0 0 8 0 3 0 0 0 0 0 0 12 0 0 0 17 0 626 160 94 0 0 0 1918 1611 0 0 109 0 17 0 0 0 0 1806 Solobacterium moorei (SP384) 7 25 7 12 24 48 146 20 17 7 79 269 9 25 19 36 2 43 255 12 22 4 26 0 66 133 12 0 52 0 29 25 18 15 0 22 53 16 41 39 19 17 Eikenella corrodens (SP385) 0 15 0 18 105 21 21 0 0 0 13 10 0 0 30 0 0 0 0 129 55 0 22 29 13 24 0 0 0 0 22 0 12 0 25 0 0 17 9 0 0 55 Eikenella halliae (SP388) 0 0 0 0 37 4 6 0 0 0 0 4 0 0 6 32 10 0 0 12 24 41 31 3 15 2 90 50 0 0 20 26 23 0 15 0 4 2 9 0 0 23 Rothia aeria (SP391) 540 56 24 441 259 194 255 402 167 180 641 958 25 51 54 297 24 0 54 259 579 161 467 24 159 0 12 72 147 52 249 36 532 12 133 114 0 42 13 0 0 435 Scardovia wiggsiae (SP393) 17 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 11 0 0 0 0 0 16 34 0 0 249 0 25 20 0 0 0 Leptotrichia sp. HMT909 (SP396) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 194 34 0 0 0 0 0 0 0 0 0 0 Treponema sp. HMT257 (SP4) 0 0 4 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 9 0 0 0 238 25 0 0 0 0 0 0 0 0 0 0 Capnocytophaga sp. HMT332 (SP40) 463 41 0 0 21 0 0 13 0 0 13 0 0 0 6 0 0 0 55 62 18 0 113 64 34 56 0 0 30 0 91 25 16 0 254 7 11 0 0 9 0 15 Alloprevotella rava (SP41) 14 6 0 0 5 14 241 23 29 0 0 0 0 0 5 8 0 0 127 0 0 2 10 0 0 0 5 0 60 42 16 17 0 11 0 0 0 0 0 11 6 5 Anaeroglobus geminatus (SP411) 0 9 0 3 113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 203 98 0 0 0 6 0 53 0 0 0 0 Actinomyces sp. HMT175 (SP412) 0 0 0 113 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 204 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteroidales_[G-2] bacterium HMT274 (SP413) 144 113 47 10 173 36 26 0 0 6 8 0 0 36 2 16 8 0 12 101 6 0 54 8 2 16 5 0 0 0 209 75 0 0 23 0 0 90 8 0 0 88 Leptotrichia sp. HMT417 (SP42) 738 89 76 1862 2899 102 1130 2193 539 93 0 466 79 0 151 1163 0 33 63 16 196 146 104 0 398 194 0 22 415 186 247 810 378 30 0 290 330 22 0 79 96 879 Selenomonas sp. HMT136 (SP422) 40 0 0 13 68 0 35 62 153 10 0 6 18 4 13 16 0 22 99 0 17 14 64 0 27 0 0 0 36 4 81 13 19 2 3 0 16 33 0 5 9 53 Actinomyces naeslundii (SP423) 51 44 0 0 117 21 49 29 0 70 261 182 0 91 101 0 0 142 89 143 119 0 150 182 0 21 16 0 0 16 84 60 36 0 8 0 28 0 0 0 0 38 Prevotella histicola (SP424) 35 0 31 538 163 0 278 906 573 0 374 367 0 46 40 215 0 164 117 0 0 0 0 0 186 92 0 0 378 0 73 91 2362 1585 67 204 304 189 829 275 79 0 Neisseria perflava (SP426) 764 5525 658 2922 0 818 2510 642 287 1294 786 367 3755 554 0 0 0 133 565 0 590 727 889 731 0 65 6164 3218 820 457 0 0 274 84 134 330 0 36 0 201 0 478 Prevotella intermedia (SP43) 0 0 0 0 0 57 36 0 0 0 0 0 0 23 13 0 0 0 14 41 30 0 0 0 0 15 16 17 0 0 71 175 0 0 0 0 0 0 0 0 0 0 Fusobacterium sp. HMT248 (SP44) 207 1656 0 12 19 1425 1012 0 0 0 0 0 0 0 0 92 47 71 0 0 363 150 217 0 0 17 323 190 0 0 566 88 0 0 127 231 241 13 0 0 27 21 Leptotrichia buccalis (SP454) 75 169 0 24 96 48 79 57 29 0 0 0 0 0 44 0 0 13 0 119 256 175 44 0 66 44 0 0 31 27 479 120 99 25 88 63 43 0 0 46 0 233 Lancefieldella parvula (SP455) 0 37 100 217 52 38 234 62 85 8 197 458 59 3 3 43 0 86 197 22 9 13 0 0 53 35 0 0 80 53 92 58 204 129 54 279 360 109 65 155 53 42 Prevotella micans (SP456) 0 0 0 4 190 7 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 31 30 19 9 6 0 0 67 56 10 0 25 0 0 5 12 0 0 0 Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP458) 6 6 0 0 27 0 0 0 0 0 8 23 0 0 0 0 0 0 14 13 31 0 0 3 0 9 0 0 0 0 56 46 0 0 0 0 0 7 5 0 0 6 Peptostreptococcus stomatis (SP459) 85 132 3 51 9 43 282 13 13 64 155 382 80 46 66 87 0 190 1136 92 494 6 200 7 434 555 0 10 209 30 523 743 21 12 28 73 34 20 368 118 37 87 Capnocytophaga granulosa (SP460) 186 0 0 357 268 62 25 0 12 0 17 45 0 32 117 0 0 0 32 32 86 49 159 0 23 0 0 0 0 0 220 49 36 0 27 0 24 0 0 0 0 276 Absconditabacteria_(SR1)_[G-1] bacterium HMT345 (SP461) 186 33 0 4 47 0 12 0 0 0 0 0 15 0 0 0 0 0 0 10 32 0 38 0 87 367 0 0 0 37 90 58 0 0 0 0 0 0 0 0 0 0 Granulicatella adiacens (SP465) 519 1229 484 1360 448 187 263 436 77 169 883 719 239 660 1019 1354 33 201 610 715 710 357 372 76 650 1076 213 140 161 54 371 85 886 437 166 797 1153 668 465 120 58 852 Lachnoanaerobaculum saburreum (SP468) 0 0 0 91 95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 15 0 21 0 0 0 0 0 0 0 94 0 0 0 0 0 0 0 0 0 0 0 Fusobacterium nucleatum_subsp._vincentii (SP49) 0 0 0 0 0 0 60 0 0 30 0 0 0 0 0 0 0 0 67 94 0 0 49 0 0 0 0 0 0 0 177 124 0 0 0 0 0 0 0 0 0 0 Schaalia lingnae (SP5) 0 0 18 56 0 0 52 0 0 0 264 316 0 109 98 0 0 0 43 0 0 0 0 0 17 51 0 0 55 0 0 0 117 92 0 0 26 36 59 16 0 0 Fusobacterium nucleatum (SP50) 69 0 0 148 412 95 61 0 0 31 0 0 0 52 220 0 0 0 0 461 182 0 0 248 117 0 0 0 0 0 410 109 180 0 74 0 0 133 39 0 0 77 Absconditabacteria_(SR1)_[G-1] bacterium HMT875 (SP506) 177 0 0 0 0 39 82 0 0 57 0 0 0 0 7 55 0 39 184 0 23 0 73 0 104 182 0 24 43 15 151 49 0 0 34 58 0 0 0 17 36 0 Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP507) 19 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 25 84 12 0 0 0 3 21 0 0 0 0 53 0 0 0 0 0 0 0 0 Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP508) 0 54 0 126 0 83 401 169 103 72 199 307 49 0 15 42 0 155 368 0 163 30 97 0 189 276 0 0 108 82 30 0 100 86 35 248 151 196 213 19 13 45 Prevotella pallens (SP51) 423 68 55 363 937 0 109 101 58 39 102 355 226 0 0 151 0 514 2870 11 19 0 46 27 1118 306 0 0 158 243 1184 220 209 148 77 171 38 17 30 531 172 1073 Porphyromonas sp. HMT930 (SP52) 177 586 41 0 0 236 237 757 582 121 0 31 164 168 228 182 58 298 245 0 229 64 145 613 109 75 1866 1244 440 532 59 0 1932 345 372 516 357 0 0 127 68 144 Lactobacillus delbrueckii (SP528) 5 0 0 0 0 0 0 0 0 0 0 0 0 0 66 239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 Prevotella saccharolytica (SP53) 86 13 3 19 51 5 5 0 0 0 0 3 0 0 7 0 0 0 10 128 34 8 21 8 11 11 5 5 0 0 74 34 9 0 14 0 0 0 0 0 0 53 Bifidobacterium dentium (SP530) 28 0 0 0 125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 51 58 0 0 0 0 0 287 12 0 0 40 Prevotella oulorum (SP54) 75 0 0 184 336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 8 17 17 19 0 0 0 0 0 300 92 42 18 11 11 0 39 17 0 0 42 Prevotella sp. HMT472 (SP55) 385 0 0 0 48 78 62 0 0 0 19 15 0 34 47 11 0 0 0 310 73 31 318 70 140 70 10 34 0 0 82 24 93 0 84 8 0 0 0 0 0 50 Parvimonas micra (SP560) 18 0 0 8 7 0 0 0 0 0 0 0 0 15 10 0 0 0 41 0 32 0 37 0 0 38 0 0 0 0 0 0 0 0 0 0 3 35 7 0 0 0 Gemella sanguinis (SP561) 113 1235 241 1312 452 611 2548 172 54 99 421 611 111 1050 786 731 0 166 535 998 468 0 157 28 1360 1536 148 152 147 44 277 69 540 229 232 1237 614 120 486 56 65 1005 Capnocytophaga sp. HMT863 (SP568) 128 0 0 0 0 22 7 0 0 0 0 0 0 13 0 0 0 0 0 16 19 0 19 0 0 37 0 0 0 0 60 16 0 0 69 0 0 0 7 5 0 36 Pseudoleptotrichia sp. HMT219 (SP570) 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 51 0 0 0 18 0 0 0 0 0 26 7 0 0 0 0 0 0 0 0 0 54 Filifactor alocis (SP575) 0 0 0 0 18 17 23 0 0 0 2 0 0 0 0 0 0 0 0 0 113 0 5 0 0 25 0 0 0 0 158 202 0 0 0 3 0 25 0 0 0 0 Undibacterium seohonense (SP578) 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 293 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lachnospiraceae_[G-2] bacterium HMT088 (SP582) 12 488 16 0 0 15 7 0 0 0 8 0 0 0 39 11 0 0 8 77 102 18 81 0 0 13 0 10 0 0 12 13 0 0 0 0 0 10 0 0 0 0 Stomatobaculum longum (SP585) 0 0 0 84 11 0 17 59 7 0 0 6 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 7 0 11 0 0 0 0 27 15 0 0 10 Abiotrophia defectiva (SP593) 320 30 8 35 111 46 34 147 42 56 513 391 18 118 506 133 15 136 127 248 246 69 109 307 85 169 36 22 0 8 159 54 240 23 57 186 125 39 33 21 0 284 Tannerella sp. HMT286 (SP6) 28 13 0 37 251 29 15 6 0 5 49 17 0 13 0 0 0 0 0 64 92 36 66 23 38 54 10 0 0 0 75 42 54 8 33 0 0 16 17 0 0 47 Alloprevotella tannerae (SP60) 106 33 5 10 37 48 157 0 17 4 0 15 7 0 0 0 0 4 66 0 0 0 26 0 13 52 0 0 12 6 91 43 0 5 0 5 109 9 9 22 18 0 Gracilibacteria_(GN02)_[G-1] bacterium HMT871 (SP600) 0 9 0 13 8 0 0 0 4 0 7 0 0 13 19 0 6 0 0 39 23 21 126 5 0 0 0 0 0 0 0 0 0 0 67 0 3 0 0 0 0 0 Leptotrichia wadei (SP601) 49 0 0 299 334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 795 144 40 0 66 0 0 0 0 0 512 355 0 0 0 33 51 0 0 0 0 132 Veillonellaceae_[G-1] bacterium HMT155 (SP607) 0 0 0 15 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 71 81 0 0 0 0 0 8 5 0 0 0 Capnocytophaga sp. HMT901 (SP61) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 127 0 0 0 0 0 0 0 0 0 0 0 352 0 21 0 0 0 0 0 Leptotrichia sp. HMT463 (SP613) 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 262 78 0 0 39 0 0 0 0 0 0 0 Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP616) 14 27 30 0 29 23 120 12 10 67 45 94 67 0 6 15 0 49 129 0 8 4 0 0 101 114 0 0 50 18 0 0 21 10 5 20 40 0 14 61 15 15 Stomatobaculum sp. HMT097 (SP619) 0 0 0 0 29 23 67 46 10 21 37 87 4 22 74 0 0 11 18 20 38 0 21 0 17 21 5 6 23 0 7 5 0 0 0 42 6 16 14 0 0 10 Pseudoleptotrichia goodfellowii (SP626) 0 0 0 10 26 0 0 0 0 0 14 26 0 0 12 0 0 0 14 0 66 27 150 5 0 0 50 93 0 0 0 0 0 0 15 7 0 7 0 0 0 0 Peptostreptococcaceae_[G-7] bacterium HMT081 (SP63) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 170 103 0 0 0 0 0 0 0 0 0 0 Oribacterium asaccharolyticum (SP64) 0 0 0 19 36 0 25 18 8 0 32 39 0 0 0 0 0 0 15 0 0 0 0 0 33 0 0 0 0 0 0 12 0 0 0 0 0 11 17 0 0 0 Corynebacterium argentoratense (SP647) 62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 68 0 44 Peptidiphaga gingivicola (SP65) 21 16 0 0 0 5 10 0 0 0 0 0 0 23 34 0 0 0 0 0 10 20 0 0 2 0 4 0 0 0 50 39 38 0 0 0 0 0 0 0 0 78 Streptococcus mutans (SP654) 0 0 0 23 70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 21 18 0 0 6 0 60 72 0 0 0 Prevotella oris (SP66) 371 235 86 188 415 0 39 137 12 44 55 110 0 14 27 22 7 32 193 252 15 0 484 59 161 181 50 0 35 22 798 625 133 12 109 191 32 47 95 28 14 193 Streptococcus sp. HMT074 (SP665) 0 202 218 665 212 67 120 175 62 0 564 72 0 371 426 0 0 0 66 260 78 77 0 35 0 0 120 118 0 0 0 0 309 166 0 453 195 605 552 59 0 227 Prevotella sp. HMT314 (SP67) 374 1 17 0 0 407 347 0 103 0 25 0 0 0 0 58 103 0 59 70 246 224 11 0 152 141 0 0 0 0 491 291 65 0 0 24 48 0 0 0 0 1296 Oribacterium sinus (SP671) 0 207 20 53 86 27 124 100 25 56 48 122 0 399 604 31 0 51 101 62 75 0 74 13 45 47 16 24 20 0 62 7 28 13 27 69 28 0 15 23 0 22 Oribacterium parvum (SP674) 0 20 0 0 0 35 182 23 10 14 14 22 10 36 34 0 0 0 32 33 35 0 21 15 79 17 0 0 99 18 0 0 0 0 33 52 26 0 0 0 0 0 Weeksellaceae_[G-1] sp. HMT900 (SP7) 21 34 5 0 0 71 28 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 11 0 0 0 0 30 21 0 0 0 0 0 0 0 0 0 0 Campylobacter concisus (SP70) 199 117 32 701 144 32 148 340 192 65 25 56 91 63 38 150 0 90 174 119 26 27 203 10 22 0 15 0 40 25 241 24 183 59 76 57 96 10 0 57 32 100 Neisseria flavescens (SP71) 1245 286 277 0 2630 3581 3496 401 1107 139 61 94 0 2153 3521 4215 145 161 350 3792 464 398 0 51 1165 1404 85 267 106 102 674 27 490 112 26 3298 1643 86 0 100 194 2264 Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP72) 84 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 106 0 83 128 20 0 0 0 267 136 0 0 0 0 49 0 0 0 0 220 Leptotrichia shahii (SP77) 787 147 0 172 55 0 0 83 0 0 0 0 0 83 36 158 30 15 69 553 73 0 0 146 183 90 49 0 0 0 664 279 593 229 785 0 15 24 7 0 0 601 Pseudoleptotrichia sp. HMT221 (SP78) 49 0 0 434 30 31 238 1474 789 87 9 57 102 14 113 357 10 0 7 0 4 34 148 0 3327 157 0 0 131 48 160 44 142 28 0 43 38 0 0 23 25 142 Streptococcus lactarius (SP79) 50 0 0 0 402 17 0 0 0 0 0 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 23 0 0 0 21 0 0 0 846 157 481 186 0 0 0 Haemophilus sputorum (SP8) 41 195 27 105 0 133 212 162 10 64 70 38 20 62 40 265 0 174 210 0 31 53 127 0 39 17 442 346 0 26 51 7 204 37 13 44 0 0 0 9 0 0 Gemella haemolysans (SP80) 2325 3991 541 1109 306 3763 4232 6484 2775 3634 670 9150 1638 3224 2033 4024 754 1091 655 2368 9435 1251 1581 3722 4469 7168 2660 2410 2485 1470 2392 315 2981 340 3786 3610 2428 710 519 874 452 1909 Fusobacterium periodonticum (SP81) 539 572 141 246 954 1541 2165 464 277 983 212 276 641 456 610 861 44 360 871 548 448 176 892 405 410 753 179 330 512 194 866 140 654 82 138 833 482 0 104 100 157 663 Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP82) 716 56 0 41 92 30 18 79 179 18 0 3 22 150 0 647 19 223 187 203 129 8 88 0 417 748 0 0 12 14 238 62 181 38 134 114 67 389 333 45 30 116 Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP83) 141 30 4 0 0 0 0 0 0 0 12 0 0 31 0 0 0 0 0 99 0 29 26 0 22 0 0 0 0 0 387 71 0 0 0 0 0 28 16 0 0 55 Weeksellaceae_[G-1] sp. HMT907 (SP84) 138 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 54 19 21 0 37 14 0 0 33 0 25 0 30 0 0 0 0 0 0 48 Schaalia odontolytica (SP85) 205 95 0 655 171 44 113 26 19 337 148 1065 26 94 218 69 0 70 74 388 40 24 29 139 0 0 14 0 217 29 212 107 46 0 21 212 124 15 0 69 0 122 Ottowia sp. HMT894 (SP88) 336 0 4 12 90 3 0 0 0 0 0 0 0 5 5 4 0 0 0 0 34 138 49 0 0 0 51 9 0 0 86 8 0 0 0 0 0 0 2 0 0 453 Porphyromonas catoniae (SP9) 0 81 0 0 16 23 0 13 2 75 10 26 18 0 43 0 25 0 0 7 5 0 47 0 216 77 0 0 65 22 7 0 432 41 16 17 0 0 7 0 0 0 Cardiobacterium valvarum (SP94) 85 19 0 0 137 12 0 0 0 5 18 9 0 12 11 0 0 0 0 394 45 65 220 7 13 0 13 7 0 0 64 23 11 0 14 0 0 65 30 0 0 47 Simonsiella muelleri_nov_97.190% (SPN112) 0 9 0 0 0 34 225 0 0 9 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 183 49 7 9 50 1 0 0 0 0 0 0 0 27 7 4 Undibacterium terreum_nov_97.897% (SPN136) 0 9 9 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 190 39 0 0 8 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lachnospiraceae_[G-2] bacterium HMT096 nov_97.761% (SPN141) 0 0 0 0 0 0 0 9 0 5 0 0 0 122 6 0 0 0 0 113 50 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 Gracilibacteria_(GN02)_[G-1] bacterium HMT872 nov_95.522% (SPN146) 46 0 0 0 0 8 39 0 0 0 0 21 0 31 4 0 11 0 0 10 40 0 8 0 0 0 0 0 0 0 9 0 0 0 13 0 0 0 0 0 0 0 Neisseria sp. HMT018 nov_97.897% (SPN37) 25 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 8 0 0 0 70 15 0 0 0 0 33 0 0 0 0 0 0 0 0 9 0 0 0 0 0 129 Pseudostreptobacillus hongkongensis_nov_95.556% (SPN57) 0 0 0 0 0 0 0 0 135 0 12 0 0 0 771 2072 41 23 22 0 401 0 0 0 544 398 837 1901 5 19 0 0 774 0 169 0 0 0 0 209 106 0 Arthrospira platensis_nov_86.064% (SPN68) 0 0 717 0 0 0 3 0 0 0 0 0 0 0 4 79 0 7 0 4 1075 816 0 12 0 0 15 0 0 0 0 0 12 0 11 31 18 0 0 0 0 59 Ruminococcaceae_[G-1] bacterium HMT075 nov_94.514% (SPN79) 0 0 0 0 0 110 64 0 9 0 0 615 0 0 3 124 20 0 25 0 187 0 8 0 37 547 0 34 0 4 0 0 0 0 0 0 0 0 0 24 29 0 Capnocytophaga granulosa_nov_91.962% (SPN90) 202 0 10 0 0 37 32 0 0 34 0 0 0 25 146 23 0 18 72 145 0 18 138 4 0 0 4 9 0 0 19 18 14 0 0 47 18 0 0 0 0 380 Pseudostreptobacillus hongkongensis_nov_96.790% (SPN98) 403 2915 91 0 0 578 414 499 551 0 0 290 139 284 629 479 147 237 224 669 458 116 637 0 173 596 2774 1045 144 39 216 0 220 12 2658 87 402 0 0 207 61 629 Fusobacterium multispecies_spp1_3 (SPP1) 83 0 0 67 108 0 32 0 0 0 82 0 0 0 0 0 0 0 0 136 84 0 184 0 0 0 34 45 0 0 85 61 0 0 29 0 0 12 23 0 0 98 Porphyromonas multispecies_spp10_2 (SPP10) 380 25 0 0 0 81 49 0 0 0 57 76 0 0 0 0 0 0 0 43 1 0 32 37 108 225 0 2 0 0 60 6 202 64 76 0 8 0 11 44 0 345 Fusobacterium multispecies_spp105_2 (SPP105) 20 48 0 123 49 53 0 0 0 0 161 141 0 65 0 0 0 0 0 136 0 0 83 57 49 0 0 0 0 0 0 30 0 0 0 0 0 60 74 0 0 0 Fusobacterium multispecies_spp107_3 (SPP107) 56 0 0 20 23 15 0 0 0 0 95 191 0 0 98 0 0 0 0 59 184 0 74 0 0 27 0 40 0 0 3 0 35 0 10 0 0 63 37 0 0 33 Porphyromonas multispecies_spp119_2 (SPP119) 90 0 0 0 0 0 17 5 0 0 27 48 0 0 52 26 0 36 32 8 0 0 26 21 23 34 0 35 0 0 0 0 0 0 33 13 12 0 0 0 0 75 Leptotrichia multispecies_spp125_2 (SPP125) 64 0 31 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 23 24 0 59 22 0 0 0 0 0 0 0 0 0 0 0 0 0 242 Lachnoanaerobaculum multispecies_spp126_2 (SPP126) 18 33 14 44 23 37 55 46 9 31 22 58 15 68 129 12 4 8 32 81 63 12 61 56 70 137 0 10 53 10 115 20 37 15 0 57 29 4 9 10 21 21 Moraxella multispecies_spp13_2 (SPP13) 95 20 0 0 0 95 375 0 0 0 0 0 0 0 0 32 0 0 38 0 16 14 100 0 272 536 115 189 0 0 40 22 18 0 61 126 222 0 0 61 7 203 Aggregatibacter multispecies_spp137_2 (SPP137) 66 2 0 0 192 131 121 37 0 14 22 0 29 0 0 36 0 62 7 0 0 0 6 283 62 72 0 0 0 0 426 55 86 0 268 41 20 0 0 29 0 15 Selenomonas multispecies_spp138_2 (SPP138) 256 0 0 0 10 0 7 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 34 0 27 12 0 0 0 0 29 48 0 0 11 0 0 0 0 0 0 211 Veillonella multispecies_spp14_3 (SPP14) 89 486 272 1730 221 124 495 35 25 297 327 217 144 240 367 47 0 25 104 384 102 41 139 24 228 420 79 90 37 57 100 27 2 2 11 810 330 45 0 44 17 182 Veillonella multispecies_spp16_2 (SPP16) 28 226 87 840 164 195 1783 86 8 99 78 105 16 8 67 211 18 49 417 76 126 65 145 140 783 630 0 0 218 71 13 17 129 5 12 297 60 20 1 40 27 44 Veillonella multispecies_spp17_3 (SPP17) 90 0 0 0 49 0 0 0 0 0 0 0 0 12 0 0 0 0 0 45 33 49 51 0 180 0 0 0 0 0 629 322 56 31 0 78 0 15 11 0 0 107 Neisseria multispecies_spp24_2 (SPP24) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 2042 0 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 0 0 Lancefieldella multispecies_spp25_2 (SPP25) 0 0 0 0 76 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 55 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 93 Selenomonas multispecies_spp26_2 (SPP26) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 175 73 0 0 0 0 0 15 0 0 0 0 Campylobacter multispecies_spp27_2 (SPP27) 407 143 15 0 311 64 64 10 28 35 7 0 12 14 22 0 11 5 26 298 126 22 312 26 13 17 22 11 11 0 159 30 60 11 78 13 14 48 21 8 0 139 Leptotrichia multispecies_spp28_2 (SPP28) 0 30 0 0 0 24 70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 109 406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus multispecies_spp29_2 (SPP29) 0 0 0 0 0 0 0 72 77 0 0 0 0 46 69 37 0 25 0 94 317 0 0 0 0 0 23 33 0 0 0 0 44 0 0 0 130 0 0 0 0 0 Streptococcus multispecies_spp34_3 (SPP34) 0 111 3 33 10 120 294 66 4 0 52 60 0 34 18 0 0 0 28 264 60 12 0 149 0 0 170 134 0 0 0 0 48 29 0 13 15 26 16 3 0 18 Streptococcus multispecies_spp35_3 (SPP35) 32 70 50 1230 211 0 134 43 38 12 263 368 24 306 186 216 0 68 164 0 84 0 0 0 52 0 37 0 93 48 25 24 271 226 18 168 308 129 127 35 0 91 Streptococcus multispecies_spp36_2 (SPP36) 81 546 280 3143 842 26 324 767 542 142 1588 491 135 4229 716 1074 22 227 512 22 100 13 143 0 131 103 62 127 155 144 229 206 1271 359 281 296 883 975 494 346 38 89 Actinomyces multispecies_spp38_2 (SPP38) 0 0 39 0 0 0 117 0 0 0 0 0 0 119 115 0 0 0 0 0 0 0 52 81 0 0 0 0 0 0 0 0 276 29 0 42 0 0 0 0 0 0 Fusobacterium multispecies_spp4_2 (SPP4) 0 0 0 0 200 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 237 152 0 0 0 24 0 109 0 0 0 84 Fusobacterium multispecies_spp47_3 (SPP47) 193 78 0 0 0 69 78 0 0 0 0 0 0 0 0 0 0 0 65 11 0 0 0 0 0 0 0 0 0 0 140 75 0 0 201 0 0 0 0 0 0 265 Fusobacterium multispecies_spp49_4 (SPP49) 82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0 0 0 0 0 0 0 24 39 0 0 0 0 0 0 0 0 0 152 Haemophilus multispecies_spp5_2 (SPP5) 128 49 0 0 85 555 587 51 113 112 7 0 71 8 15 703 87 240 110 53 56 79 79 0 21 11 30 321 16 41 67 0 0 0 129 36 0 0 0 40 0 32 Fusobacterium multispecies_spp50_2 (SPP50) 10 0 1 15 19 3 1 8 17 0 47 32 0 24 31 11 17 34 10 6 3 8 5 4 12 1 50 20 22 0 37 7 10 0 1 25 0 0 0 38 0 3 Streptococcus multispecies_spp54_17 (SPP54) 9479 19285 1453 12142 9802 12137 16635 18641 5717 8117 11315 19475 5204 15657 9576 15044 2472 2442 5231 20892 26027 5976 7563 37662 17038 18339 26350 26352 6352 4699 16884 3617 16210 1615 17946 13989 9631 14994 3870 2163 938 10361 Streptococcus multispecies_spp55_18 (SPP55) 345 206 0 0 0 1099 1113 3623 434 219 1401 972 129 0 0 0 0 0 77 0 4722 219 0 645 0 127 0 0 0 0 98 0 844 923 3782 1477 204 516 586 206 0 0 Streptococcus multispecies_spp56_2 (SPP56) 63 64 6 764 161 49 93 109 28 63 1499 1175 27 127 63 94 0 72 64 80 1197 41 65 164 738 624 44 36 27 16 217 84 151 37 224 73 58 419 294 68 30 73 Haemophilus multispecies_spp57_2 (SPP57) 169 422 82 162 129 440 446 414 388 1359 13 170 391 177 87 846 126 299 379 314 1499 264 140 1437 38 23 1452 1817 110 377 225 15 1733 185 615 208 212 23 5 63 11 63 Actinomyces multispecies_spp58_2 (SPP58) 0 0 0 9 8 0 161 0 0 0 75 0 0 0 41 53 0 0 0 239 270 47 95 78 0 0 115 133 0 0 19 0 0 0 0 0 0 0 0 0 0 0 Aggregatibacter multispecies_spp61_2 (SPP61) 94 42 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 232 71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 Haemophilus multispecies_spp64_2 (SPP64) 57 152 0 4 0 386 980 756 267 256 0 0 248 37 53 120 0 398 500 0 254 1358 17 0 24 0 1823 1095 67 30 113 0 41 101 9 186 129 0 0 9 0 65 Schaalia multispecies_spp67_2 (SPP67) 0 0 65 0 0 0 0 0 18 0 31 201 0 0 0 0 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 18 67 0 103 0 0 0 Neisseria multispecies_spp69_4 (SPP69) 2745 217 317 1564 2368 1763 832 6811 647 2529 284 270 113 123 609 2921 82 179 452 1025 241 927 1084 1119 50 144 301 137 304 164 1508 194 2569 534 439 1221 228 144 48 192 0 1072 Selenomonas multispecies_spp7_2 (SPP7) 37 0 0 12 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107 0 0 8 18 20 0 5 0 0 0 14 27 13 13 39 0 0 0 0 0 0 23 Prevotella multispecies_spp70_2 (SPP70) 138 12 77 8 82 0 0 41 0 0 0 0 0 0 321 8 0 20 0 0 0 0 0 66 0 0 0 0 0 0 58 0 0 13 0 0 0 0 0 0 0 0 Catonella multispecies_spp75_2 (SPP75) 101 0 0 0 93 0 0 0 0 0 12 0 0 0 0 0 0 0 0 67 58 0 58 19 0 0 45 0 0 0 99 87 35 0 0 0 0 0 0 0 0 30 Lachnospiraceae_[G-2] multispecies_spp76_2 (SPP76) 23 408 0 0 0 34 40 0 20 0 0 0 8 39 12 53 0 0 0 74 35 11 103 39 0 17 24 28 19 8 0 20 6 5 78 30 48 0 0 26 44 40 multigenus multispecies_spp78_2 (SPP78) 150 14 0 16 40 12 17 8 0 0 15 19 0 34 46 11 0 0 6 593 115 39 180 23 42 37 7 12 0 2 49 54 26 0 20 2 0 0 12 0 0 75 Streptococcus multispecies_spp82_2 (SPP82) 10 14 0 126 18 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 20 0 13 481 0 0 0 0 133 0 0 0 0 0 8 9 0 0 0 0 Absconditabacteria_(SR1)_[G-1] multispecies_spp84_2 (SPP84) 158 88 0 0 0 433 268 0 0 0 0 63 0 29 0 0 21 75 47 23 226 158 75 0 0 0 74 0 29 0 0 0 0 0 0 0 0 0 0 0 0 55 Fusobacterium multispecies_spp87_3 (SPP87) 517 158 35 381 1842 148 113 76 0 0 0 41 0 109 799 51 0 0 161 660 312 133 520 320 146 107 53 44 0 0 660 173 711 162 268 36 52 74 30 0 0 251 Selenomonas multispecies_spp89_3 (SPP89) 0 0 0 59 108 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 76 0 0 24 0 0 0 0 116 62 26 0 8 0 0 0 0 0 0 36 Porphyromonas multispecies_spp9_3 (SPP9) 0 0 0 12 0 49 0 13 0 0 0 0 0 0 101 0 0 0 88 0 21 0 29 31 0 214 13 0 0 0 34 19 0 0 19 0 32 0 0 5 0 40 multigenus multispecies_spp91_3 (SPP91) 0 100 0 0 0 29 71 12 0 47 86 25 23 0 0 0 0 0 70 36 75 4 27 0 113 293 11 10 5 0 242 111 2 0 11 0 0 0 0 11 14 0 Capnocytophaga multispecies_sppn15_2_nov_96.445% (SPPN15) 303 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 65 0 10 343 9 11 0 20 5 0 0 0 0 17 0 44 0 0 0 8 0 0 0 Rhodoligotrophos multispecies_sppn17_2_nov_77.073% (SPPN17) 0 0 125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 194 116 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 Fusobacterium multispecies_sppn3_2_nov_97.531% (SPPN3) 106 0 0 0 0 481 209 426 370 0 0 0 18 320 243 223 61 73 0 138 353 233 174 29 0 0 782 1628 93 12 0 0 46 0 2018 51 31 0 0 254 53 337