Domain Phylum Class Order Family Genus Species SPN1 Bacteria Firmicutes Bacilli Lactobacillales Aerococcaceae Abiotrophia defectiva_nov_97.037% SPN2 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces israelii_nov_96.514% SPN3 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_175_nov_97.830% SPN11 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Frondibacter mangrovi_nov_92.771% SPN15 Bacteria Saccharibacteria_(TM7) Saccharibacteria_(TM7)_[C-1] Saccharibacteria_(TM7)_[O-1] Saccharibacteria_(TM7)_[F-1] Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870_nov_97.093% SPN22 Bacteria Firmicutes Clostridia Eubacteriales Oscillospiraceae Faecalibacterium prausnitzii_nov_96.341% SPN27 Bacteria Actinobacteria Actinomycetia Propionibacteriales Nocardioidaceae Aeromicrobium panaciterrae_nov_96.327% SPN33 Bacteria Firmicutes Clostridia Eubacteriales Oscillospiraceae Faecalibacterium prausnitzii_nov_97.755% SPN39 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella sp._HMT_780_nov_97.519% SPN44 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Bergeyella zoohelcum_nov_92.673% SPN50 Bacteria Actinobacteria Actinomycetia Streptosporangiales Nocardiopsaceae Nocardiopsis nikkonensis_nov_97.250% SPN54 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella veroralis_nov_96.780% SPN60 Bacteria Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium matruchotii_nov_97.839% SPN61 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces naeslundii_nov_97.417% SPN62 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces viscosus_nov_95.833% SPN63 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga gingivalis_nov_97.276% SPN64 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas noxia_nov_96.154% SPN65 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas catoniae_nov_97.909% SPN66 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces massiliensis_nov_96.344% SP1 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas gingivalis SP10 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Tannerella sp._HMT_286 SP100 Bacteria Firmicutes Bacilli Bacillales Gemellaceae Gemella morbillorum SP101 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Stomatobaculum sp._HMT_097 SP102 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Oribacterium sp._HMT_078 SP103 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga gingivalis SP104 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter concisus SP105 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_448 SP106 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Lachnoanaerobaculum saburreum SP107 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Peptidiphaga sp._HMT_183 SP108 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces johnsonii SP110 Bacteria Saccharibacteria_(TM7) Saccharibacteria_(TM7)_[C-1] Saccharibacteria_(TM7)_[O-1] Saccharibacteria_(TM7)_[F-1] Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 SP111 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus sobrinus SP112 Bacteria Actinobacteria Actinomycetia Actinomycetales Propionibacteriaceae Cutibacterium acnes SP113 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_392 SP114 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcus stomatis SP115 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_314 SP116 Bacteria Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia coli SP117 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus oralis_subsp._tigurinus_clade_070 SP118 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_171 SP119 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_473 SP12 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus sanguinis SP120 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces gerencseriae SP121 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Lachnospiraceae_[G-3] bacterium_HMT_100 SP122 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_221 SP123 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus faecalis SP124 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas aeruginosa SP125 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas pasteri SP128 Bacteria Actinobacteria Actinobacteria Propionibacteriales Propionibacteriaceae Arachnia propionica SP129 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_475 SP130 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_175 SP131 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas catoniae SP132 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia sp._HMT_877 SP133 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Bergeyella sp._HMT_322 SP134 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas artemidis SP135 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia hongkongensis SP136 Bacteria Proteobacteria Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium myrsinacearum SP137 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus oralis_subsp._dentisani_clade_058 SP138 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces dentalis SPP2 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus argenteus_aureus_roterodami SP143 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_225 SP144 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax temperans SP146 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces oris SP147 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria sicca SP148 Bacteria Firmicutes Bacilli Lactobacillales Carnobacteriaceae Granulicatella elegans SP149 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia sp._HMT_178 SP150 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella loescheii SP151 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae Erythrobacter aureus SP152 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus constellatus SP153 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces naeslundii SP154 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga ochracea SP156 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_414 SPP3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_292_sp._HMT_300 SP16 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga leadbetteri SP160 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus vestibularis SP161 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus haemolyticus SP162 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus anginosus SPP4 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus seminalis_sp._HMT_908 SP165 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Peptidiphaga gingivicola SP166 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas noxia SP169 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae Lancefieldella parvula SP17 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Kingella oralis SP170 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas endodontalis SP171 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Halomonas alkaliantarctica SP174 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Stutzerimonas stutzeri SP175 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia meyeri SP178 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria cinerea SP18 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Lachnoanaerobaculum gingivalis SP184 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella copri SP185 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas sputigena SP188 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces viscosus SP19 Bacteria Firmicutes Bacilli Lactobacillales Carnobacteriaceae Granulicatella adiacens SP190 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola vulgatus SP191 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilaceae Parvimonas micra SP193 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp._HMT_412 SP2 Bacteria Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium otitidis SP20 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus mutans SP201 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Lachnoanaerobaculum orale SP202 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Halomonas venusta SP209 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae Herbaspirillum huttiense SPP8 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella dispar_parvula SP22 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_170 SP23 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella melaninogenica SP24 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Halomonas titanicae SP25 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga granulosa SP26 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus chosunense SP27 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp._HMT_380 SP28 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria monocytogenes SP29 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter showae SP3 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus halotolerans SP30 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_308 SP31 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus intermedius SP32 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus oralis SP33 Bacteria Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Solobacterium moorei SP34 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp._HMT_335 SP35 Bacteria Deinococcus-Thermus Deinococci Trueperales Trueperaceae Truepera radiovictrix SP36 Bacteria Saccharibacteria_(TM7) Saccharibacteria_(TM7)_[C-1] Saccharibacteria_(TM7)_[O-1] Saccharibacteria_(TM7)_[F-1] Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 SP37 Bacteria Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella enterica SP38 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Eikenella corrodens SP39 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia mirabilis SP4 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum SP40 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria subflava SP42 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella intermedia SP43 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_525 SP45 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus sp._HMT_064 SP46 Bacteria Firmicutes Bacilli Bacillales Gemellaceae Gemella haemolysans SP47 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia buccalis SP48 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_897 SP49 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus gordonii SP5 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus mitis SP50 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella nigrescens SP52 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus warneri SP53 Bacteria Saccharibacteria_(TM7) Saccharibacteria_(TM7)_[C-1] Saccharibacteria_(TM7)_[O-1] Saccharibacteria_(TM7)_[F-1] Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 SP54 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_212 SP55 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_215 SP56 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_317 SP57 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella oulorum SP58 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Stomatobaculum longum SP59 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcaceae_[G-1] bacterium_HMT_075 SP6 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella parvula SP60 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilaceae Parvimonas sp._HMT_110 SP61 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia aeria SP62 Bacteria Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium matruchotii SP63 Bacteria Firmicutes Bacilli Lactobacillales Aerococcaceae Abiotrophia defectiva SP64 Bacteria Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia fergusonii SP65 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella sp._HMT_780 SP66 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia pickettii SP67 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia odontolytica SP68 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_513 SP69 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Ottowia sp._HMT_894 SP7 Bacteria Saccharibacteria_(TM7) Saccharibacteria_(TM7)_[C-1] Saccharibacteria_(TM7)_[O-1] Saccharibacteria_(TM7)_[F-1] Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 SP70 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp._HMT_278 SP71 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus cristatus SP72 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia wadei SP73 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella oris SP74 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sputigena SP75 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus sp._HMT_036 SP76 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Dialister invisus SP77 Bacteria Firmicutes Clostridia Eubacteriales Peptostreptococcaceae Peptoanaerobacter [Eubacterium] yurii SP78 Bacteria Proteobacteria Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium valvarum SP79 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria elongata SP8 Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus fermentum SP80 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella denticola SP81 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia dentocariosa SP82 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter gracilis SP83 Bacteria Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella sonnei SP84 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia sp._HMT_180 SP85 Bacteria Saccharibacteria_(TM7) Saccharibacteria_(TM7)_[C-1] Saccharibacteria_(TM7)_[O-1] Saccharibacteria_(TM7)_[F-1] Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 SP86 Bacteria Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae Scardovia wiggsiae SP87 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter segnis SP88 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella tannerae SP89 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia mucilaginosa SP9 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Allobacillus halotolerans SP90 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus parainfluenzae SP91 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus salivarius SP92 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Catonella morbi SP93 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy SP94 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces massiliensis SP95 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella salivae SP96 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae Olsenella sp._HMT_807 SP97 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga endodontalis SP99 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_169