#Species	F12829-S01	F12829-S02	F12829-S03	F12829-S04	F12829-S05	F12829-S06	F12829-S07	F12829-S08	F12829-S09	F12829-S10	F12829-S11	F12829-S12	F12829-S13	F12829-S14	F12829-S15	F12829-S16	F12829-S17	F12829-S18	F12829-S19	F12829-S20	F12829-S21	F12829-S22	F12829-S23	F12829-S24	F12829-S25	F12829-S26	F12829-S27	F12829-S28	F12829-S29	F12829-S30	F12829-S31	F12829-S32	F12829-S33	F12829-S34	F12829-S35	F12829-S36
Staphylococcus warneri (SP1)	0	0	0	0	0	0	0	222	81	0	0	0	0	0	0	0	0	0	1	119	27	0	0	0	0	0	0	0	0	0	0	355	241	0	0	0
Listeria monocytogenes (SP10)	0	0	0	0	0	0	0	16	0	459	422	445	0	0	0	0	0	0	0	0	0	2220	1720	1560	0	0	0	0	0	0	0	0	0	1948	1849	1851
Fusobacterium nucleatum (SP11)	685	614	651	589	516	451	3	269	176	0	0	0	745	562	591	602	579	409	3	137	462	0	0	0	425	446	384	337	316	458	1	346	346	0	0	0
Prevotella oris (SP12)	55	54	65	61	75	59	6	3180	2365	0	0	0	51	46	42	57	53	47	4	1986	2068	0	0	0	37	34	26	25	35	41	6	3166	2662	0	0	0
Alloprevotella sp. HMT473 (SP13)	690	536	660	0	0	0	0	5	1	0	0	0	588	487	513	0	0	0	0	0	0	0	0	0	296	347	281	0	0	0	0	0	0	0	0	0
Leptotrichia sp. HMT212 (SP14)	24	30	28	441	462	349	0	0	0	0	0	0	30	35	27	392	418	307	0	0	0	0	0	0	15	22	8	228	219	325	0	0	0	0	0	0
Streptococcus mitis (SP15)	1170	1785	1567	714	930	672	0	14	0	0	0	0	1751	1921	1776	926	985	991	1	0	0	0	0	0	2039	2197	1951	922	923	1234	0	0	0	0	0	0
Streptococcus oralis (SP16)	226	518	335	29	69	58	0	1	0	0	0	0	471	550	470	83	99	108	0	0	0	0	0	0	594	596	559	124	101	141	0	0	0	0	0	0
Veillonella parvula (SP18)	554	540	553	2228	2266	1936	0	8	2	0	0	0	430	405	404	1374	1663	1344	0	18	0	0	0	0	270	329	296	865	919	1171	0	0	0	0	0	0
Escherichia fergusonii (SP19)	0	0	0	0	0	0	0	66	1	1791	1746	1589	0	0	0	0	0	0	0	0	0	929	687	1270	0	0	0	0	0	0	0	0	0	624	455	550
Streptococcus sanguinis (SP2)	90	71	98	395	419	378	0	0	0	0	0	0	146	165	164	924	1002	1051	0	0	0	0	0	0	174	169	178	1292	1185	1624	0	0	0	0	0	0
Shigella sonnei (SP20)	0	0	0	0	0	0	0	97	2	1650	1738	1465	0	0	0	0	0	0	0	0	0	941	660	1198	0	0	0	0	0	0	0	0	0	622	426	541
Schaalia odontolytica (SP21)	20	17	33	471	508	380	0	0	0	0	0	0	60	52	49	821	924	962	0	0	0	0	0	0	66	53	44	1168	1274	1854	0	0	0	0	0	0
Lautropia mirabilis (SP22)	10	15	15	448	551	347	0	3	0	0	0	0	9	6	12	272	324	337	0	0	0	0	0	0	16	14	10	406	457	581	0	0	0	0	0	0
Streptococcus sp. HMT064 (SP23)	156	188	180	5	8	9	0	0	0	0	0	0	267	277	220	11	7	9	0	0	0	0	0	0	297	275	265	10	16	18	0	0	0	0	0	0
Streptococcus gordonii (SP24)	459	306	425	230	225	234	0	6	0	0	0	0	520	537	456	644	664	748	0	0	0	0	0	0	543	522	498	641	736	985	0	0	0	0	0	0
Bacillus halotolerans (SP25)	0	0	0	0	0	0	0	210	6	5487	5449	5223	0	0	0	0	0	0	0	0	0	3206	2452	3796	0	0	0	0	0	0	0	0	0	2469	1975	2389
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP26)	22	9	28	669	895	520	0	0	0	0	0	0	20	18	22	696	675	545	0	0	0	0	0	0	13	16	14	429	465	613	0	0	0	0	0	0
Capnocytophaga gingivalis (SP27)	133	121	132	126	80	86	0	3	0	0	0	0	164	140	123	171	158	127	0	0	0	0	0	0	75	82	78	88	62	114	0	0	0	0	0	0
Truepera radiovictrix (SP28)	0	0	0	0	0	0	10	3121	3352	0	0	0	3	1	0	0	0	1	28	10444	7677	0	1	0	0	0	4	1	0	0	32	5583	5234	0	0	0
Limosilactobacillus fermentum (SP29)	0	0	0	0	0	0	0	29	0	390	409	467	0	0	0	0	0	0	0	0	0	1640	1227	1263	0	0	0	0	0	1	0	0	0	2654	2077	2003
Salmonella enterica (SP3)	0	0	0	0	0	0	0	194	0	3795	3819	3432	0	0	0	0	0	0	0	0	0	2052	1439	2653	0	0	0	0	0	0	0	0	0	1358	975	1285
Leptotrichia sp. HMT221 (SP30)	176	141	146	0	0	0	0	0	0	0	0	0	195	181	198	0	0	0	0	0	0	0	0	0	109	150	138	0	0	0	0	0	0	0	0	0
Pseudomonas aeruginosa (SP31)	0	0	0	0	0	0	0	90	6	1374	1373	1299	0	0	0	0	0	0	0	0	0	705	464	881	0	0	0	0	0	0	0	10	0	442	319	387
Neisseria sicca (SP32)	31	23	26	280	181	217	0	0	0	0	0	0	22	23	21	412	425	324	0	0	0	0	0	0	12	20	15	243	228	268	0	0	0	0	0	0
Actinomyces sp. HMT448 (SP33)	134	142	122	0	0	0	0	1	0	0	0	0	307	325	284	0	0	0	0	0	0	0	0	0	311	332	274	0	0	0	0	0	0	0	0	0
Capnocytophaga leadbetteri (SP34)	71	74	85	687	519	485	0	0	0	0	0	0	104	71	77	559	508	478	0	0	0	0	0	0	42	72	47	327	281	415	0	0	0	0	0	0
Schaalia sp. HMT180 (SP35)	78	117	104	102	97	77	0	0	0	0	0	0	155	163	135	134	152	182	0	0	0	0	0	0	170	210	141	206	205	310	0	0	0	0	0	0
Enterococcus faecalis (SP36)	0	0	0	0	0	0	0	28	0	303	292	344	0	0	0	0	0	0	0	0	0	1668	1220	1452	0	0	0	0	0	0	0	0	0	1009	1036	1064
Corynebacterium matruchotii (SP37)	522	498	475	17	3	5	0	69	48	0	0	0	1075	826	772	18	24	13	0	34	0	0	0	0	482	582	505	11	4	21	0	51	40	0	0	0
Campylobacter gracilis (SP38)	123	116	144	38	16	20	0	0	0	0	0	0	153	111	119	34	41	31	0	0	0	0	0	0	77	96	64	15	12	19	0	0	0	0	0	0
Actinomyces sp. HMT170 (SP39)	33	35	29	42	31	44	0	0	0	0	0	0	48	49	38	142	135	143	0	0	0	0	0	0	50	51	40	155	150	226	0	0	0	0	0	0
Porphyromonas gingivalis (SP40)	0	0	0	0	0	0	51	11258	11249	0	0	0	0	0	0	0	0	0	25	8544	10212	0	0	0	0	0	0	0	0	0	24	13284	11587	0	0	0
Actinomyces oris (SP41)	64	44	62	97	77	76	0	0	3	0	0	0	106	90	97	219	285	268	0	0	0	0	0	0	115	113	90	326	293	466	0	0	0	0	0	0
Streptococcus sobrinus (SP42)	0	0	0	16	18	11	0	0	0	0	0	0	0	0	0	195	223	237	0	0	17	0	0	0	0	0	0	241	223	367	0	0	0	0	0	0
Leptotrichia hongkongensis (SP43)	55	65	47	108	143	104	0	0	0	0	0	0	64	49	45	94	84	75	0	0	0	0	0	0	29	33	28	53	53	100	0	0	0	0	0	0
Streptococcus salivarius (SP44)	3	5	7	80	87	67	0	9	0	0	0	0	38	51	31	447	468	489	0	0	0	0	0	0	25	42	46	378	386	524	0	0	0	0	0	0
Prevotella melaninogenica (SP45)	217	211	216	329	352	251	0	0	0	0	0	0	209	143	165	209	243	208	0	0	0	0	0	0	120	134	103	139	133	185	0	0	0	0	0	0
Kingella oralis (SP46)	65	67	58	10	15	14	0	0	0	0	0	0	86	83	68	17	25	11	0	0	0	0	0	0	42	56	56	6	9	28	0	0	0	0	0	0
Neisseria cinerea (SP47)	127	84	118	0	0	0	0	0	0	0	0	0	91	83	80	0	0	0	0	0	0	0	0	0	40	61	44	0	0	0	0	0	0	0	0	0
Rothia dentocariosa (SP48)	407	507	421	106	105	112	0	0	1	0	0	0	499	492	473	120	151	125	0	0	0	0	0	0	425	482	392	137	150	215	0	0	0	0	0	0
Escherichia coli (SP49)	0	0	0	0	0	0	0	2	0	177	201	186	0	0	0	0	0	0	0	0	0	112	61	149	0	0	0	0	0	0	0	0	0	55	58	66
Actinomyces sp. HMT169 (SP50)	39	46	49	121	95	80	0	3	0	0	0	0	68	68	46	210	254	276	0	0	0	0	0	0	54	53	54	244	253	321	0	0	0	0	0	0
Leptotrichia wadei (SP51)	235	235	242	62	53	42	0	0	2	0	0	0	387	264	306	49	48	57	0	0	0	0	0	0	194	250	245	38	43	68	0	0	0	0	0	0
Streptococcus chosunense (SP52)	96	165	139	3	4	6	0	3	0	0	0	0	169	182	174	6	5	4	1	0	0	0	0	0	177	221	185	3	7	3	0	0	0	0	0	0
Leptotrichia sp. HMT392 (SP53)	15	23	25	183	183	132	0	0	0	0	0	0	30	38	17	179	156	150	0	0	0	0	0	0	17	17	14	99	70	137	0	0	0	0	0	0
Streptococcus intermedius (SP54)	17	29	28	41	44	43	0	0	0	0	0	0	59	57	55	65	82	78	0	0	0	0	0	0	56	66	60	71	92	106	0	0	0	0	0	0
Granulicatella adiacens (SP55)	306	275	207	153	159	149	0	7	0	0	0	0	300	277	292	159	171	175	0	0	0	0	0	0	314	336	294	157	154	245	0	0	0	0	0	0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP56)	39	28	34	1	0	0	0	0	0	0	0	0	105	92	121	0	1	0	0	0	0	0	0	0	97	140	108	0	2	0	0	0	0	0	0	0
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP57)	87	75	67	25	37	25	0	0	12	0	0	0	81	52	59	21	20	22	0	0	0	0	0	0	40	52	49	14	13	22	0	0	0	0	0	0
Streptococcus cristatus (SP58)	112	121	129	3	8	4	0	1	1	0	0	0	176	192	185	2	5	4	0	0	0	0	0	0	213	222	189	1	7	10	0	0	0	0	0	0
Ottowia sp. HMT894 (SP59)	13	16	17	80	61	74	0	0	0	0	0	0	42	40	27	99	92	66	0	0	0	0	0	0	9	23	11	54	36	61	0	0	0	0	0	0
Abiotrophia defectiva (SP60)	7	7	7	172	188	189	0	0	0	0	0	0	12	6	13	267	361	340	0	0	0	0	0	0	13	7	10	439	439	691	0	0	0	0	0	0
Streptococcus mutans (SP61)	3	4	6	0	0	0	0	12	3	0	0	0	48	49	58	0	0	0	0	8	20	0	0	0	64	41	60	0	0	0	0	76	186	0	0	0
Prevotella intermedia (SP62)	83	83	114	31	18	18	0	0	0	0	0	0	70	64	66	23	19	17	0	0	0	0	0	0	44	49	30	7	8	18	0	0	0	0	0	0
Schaalia meyeri (SP63)	110	137	116	1	3	7	0	6	13	0	0	0	101	87	80	12	0	4	0	0	0	0	0	0	114	97	106	6	5	9	0	0	0	0	0	0
Erythrobacter aureus (SP64)	0	0	0	0	0	0	2	94	65	0	0	0	0	0	0	0	0	0	0	47	136	0	0	0	0	0	0	0	0	0	0	135	41	0	0	0
Actinomyces viscosus (SP65)	16	11	7	17	10	28	0	0	0	0	0	0	17	13	12	39	51	38	0	0	0	0	0	0	9	11	7	52	56	59	0	0	0	0	0	0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP66)	64	59	58	10	14	7	0	0	0	0	0	0	47	55	35	7	7	4	0	0	0	0	0	0	27	31	32	2	4	11	0	0	0	0	0	0
Parvimonas micra (SP67)	43	25	33	0	0	0	0	0	0	0	0	0	26	22	18	0	0	0	0	0	0	0	0	0	41	34	31	1	0	0	0	0	0	0	0	0
Prevotella nigrescens (SP7)	75	69	82	126	65	80	0	0	0	0	0	0	78	54	65	105	87	86	0	0	0	0	0	0	37	52	33	68	60	78	0	0	0	0	0	0
Allobacillus halotolerans (SP8)	103	0	0	56	0	0	1368	178	50	28	0	0	364	0	0	194	0	0	8056	93	130	112	0	0	373	0	0	236	0	0	12023	279	294	190	0	0
Neisseria subflava (SP9)	13	7	8	0	1	2	3	1082	1035	0	0	0	6	6	7	4	0	1	5	999	1064	0	0	0	8	8	4	0	3	0	1	1884	1497	0	0	0
Frondibacter mangrovi_nov_92.771% (SPN1)	540	1	0	445	0	1	18798	2089	1288	379	0	0	574	0	0	283	0	0	9477	1606	1633	193	0	0	274	0	0	200	0	0	7025	1967	1905	110	0	0
Actinomyces sp. HMT175 nov_97.633% (SPN2)	184	179	217	6	9	4	0	15	0	0	0	0	278	296	280	33	31	45	0	0	0	0	0	0	296	296	264	33	50	60	0	0	0	0	0	0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 nov_97.093% (SPN3)	72	82	84	1	1	2	0	0	0	0	0	0	67	65	62	1	0	0	0	0	0	0	0	0	45	46	48	2	0	2	0	0	0	0	0	0
Aeromicrobium panaciterrae_nov_96.122% (SPN4)	0	0	0	0	0	0	0	78	48	0	0	0	0	0	0	0	0	0	1	58	54	0	0	0	0	0	0	0	0	0	0	88	41	0	0	0
Veillonella multispecies_spp1_2 (SPP1)	1548	1375	1402	2222	2469	1940	0	7	6	0	0	0	1207	1040	1080	1472	1633	1428	0	0	0	0	0	0	726	854	667	923	929	1261	0	0	0	0	0	0
Staphylococcus multispecies_spp2_3 (SPP2)	0	0	0	0	0	0	0	19	0	146	153	171	0	0	0	0	2	0	0	15	0	2988	2272	2316	0	0	0	1	0	0	0	0	0	1871	1909	1923