Taxon S001 S002 S003 S004 S005 S006 S007 S008 S009 S010 S011 S012 S013 S014 S015 S061 S062 S063 S064 S065 S066 S067 S068 S069 S070 S071 S072 S073 S074 S075 Veillonellaceae_[G-1] bacterium_HMT_145 (SP1) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 17 0 0 14 0 3 0 103 0 0 219 0 Actinomyces israelii (SP10) 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 5 0 0 0 3 1 7 Neisseria subflava (SP101) 0 0 86 0 1 1 1 0 0 0 0 0 0 0 1 0 0 5 3 0 0 0 0 0 0 1 2 4 0 2 Rothia mucilaginosa (SP102) 9 7 13 42 11 8 7 4 8 18 6 1 4 4 42 1 38 13 55 55 17 19 32 17 71 29 1 37 0 39 Campylobacter concisus (SP103) 3 1 1 2 0 1 1 0 1 2 1 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 232 Fusobacterium nucleatum_subsp._animalis (SP104) 1 3 0 227 1 2 41 4 0 0 1 0 4 3 8 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 Micrococcus cohnii (SP105) 0 0 0 0 0 6 0 212 6 1 0 4 0 0 0 0 0 0 0 1 0 0 0 0 7063 0 0 0 0 0 Neisseria oralis (SP11) 2 1 0 0 0 1 0 0 0 0 2 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 3 0 1 0 Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP119) 0 0 0 0 0 0 3101 0 0 0 0 0 0 0 42 2 1 0 34 0 167 92 3 32 48 9 17 73 4 3013 Pelomonas aquatica (SP125) 0 0 0 0 0 0 0 0 256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 Campylobacter gracilis (SP138) 1 1876 0 11651 68 0 0 1 1 0 1 0 0 0 12 0 0 0 1 0 0 0 0 0 7950 0 0 0 0 0 Selenomonas noxia (SP140) 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 6 0 0 1 2 1 0 0 0 0 Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP144) 0 219 0 1697 0 3 524 0 0 0 0 0 0 2 209 1 1 0 42 1 132 71 2 60 118 0 11 106 3093 5508 Prevotella pleuritidis (SP145) 0 1 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 3 0 330 0 0 0 Streptococcus sanguinis (SP150) 45 6 1901 555 1 36 88 3 5 27 0 5 1 250 1 76 2 1004 49 3 47 23 2 669 44 102 139 24 284 551 Porphyromonas pasteri (SP153) 0 0 0 0 2 2 5 1 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 10 0 0 0 0 5 0 Fusobacterium periodonticum (SP154) 0 2 1 0 2 3 4 0 0 0 2 0 0 0 3 0 1 2 4 0 0 0 0 0 0 0 4 4 1 1 Olsenella uli (SP157) 0 0 0 0 0 53 0 0 0 0 19 0 8 0 0 0 16 2 120 18 0 116 42 16 0 0 2994 272 63 0 Neisseria elongata (SP158) 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 2 0 3 0 0 1 0 Treponema socranskii (SP159) 1 0 8 0 0 6 17 0 0 0 0 0 525 0 6 0 0 0 314 0 0 7 8 3 0 1 51 0 295 2 Bacteroidaceae_[G-1] bacterium_HMT_272 (SP160) 0 0 104 8704 6225 1328 1 1 0 1 1018 1 1 2 111 0 0 0 3454 1280 0 3763 1208 549 0 5735 0 2351 0 0 Corynebacterium durum (SP161) 2 0 0 0 0 0 262 1469 0 0 1 269 0 2 0 0 0 2 231 1 0 0 1 0 0 0 7 0 14 0 Kingella denitrificans (SP163) 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 Stutzerimonas stutzeri (SP164) 0 0 1 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 2 0 0 11 0 7 1 0 8 0 1 0 Pyramidobacter piscolens (SP173) 0 0 0 0 1 1 1 0 0 0 25777 0 0 1 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 Corynebacterium matruchotii (SP18) 0 0 1 1 0 1 0 0 0 0 4 1 0 2 1 0 0 0 42 0 1 0 0 0 0 0 9 3 5 2 Lachnospiraceae_[G-7] bacterium_HMT_086 (SP180) 0 0 3 0 0 0 236 0 0 0 51 0 15 0 10 0 6 0 0 0 0 44 24 0 0 0 0 5 0 1 Veillonellaceae_[G-1] bacterium_HMT_155 (SP181) 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 4 2 0 0 1 2 0 0 3 Stomatobaculum sp._HMT_373 (SP188) 0 0 0 0 6 6 0 0 0 0 0 0 0 0 1678 0 2755 0 19830 3899 2 3410 599 33 5 3574 4810 3 0 2341 Peptococcus sp._HMT_167 (SP192) 0 0 0 0 0 0 19 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 2 0 0 0 Oribacterium sp._HMT_078 (SP193) 2 1 2 0 2 1 3 1 0 2 7357 0 1 0 530 13 1848 0 11 1 3 217 0 31 26 0 1766 237 1 5 Micrococcus aloeverae (SP195) 0 0 0 0 0 0 0 1739 119 0 0 70 0 0 0 0 0 0 2 0 0 0 0 1 126 0 0 0 0 2 Peptostreptococcaceae_[XI][G-3] bacterium_HMT_495 (SP197) 0 0 1 0 136 27 0 0 0 0 45 0 0 0 8 0 16 0 33 37 0 136 8 0 0 0 67 0 0 0 Lachnospiraceae_[G-8] bacterium_HMT_500 (SP20) 0 0 33 0 0 97 4678 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 3 Enterococcus faecalis (SP200) 155 24 0 165 7 140 59 1809 2991 5295 102 4006 1 1183 38 119479 377 27563 56332 3299 3915 974 254 443 485 1176 256 318 6671 9010 Veillonella parvula (SP202) 11 3 270 3 5 7 0 3 2 0 4 2 2 4 22 0 0 0 7 0 0 1 0 0 0 0 0 0 0 8 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP212) 6 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP213) 0 0 0 137 49 0 0 0 0 0 0 0 0 0 22 2 0 0 29 17 0 9 0 25 0 246 34 0 24 10 Veillonellaceae_[G-1] bacterium_HMT_135 (SP214) 0 506 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 3 0 0 0 0 20 Alloprevotella tannerae (SP217) 2 0 0 0 0 0 208 0 0 0 3 0 88 0 19 0 0 0 0 0 0 0 0 1 0 0 11 0 0 0 Shuttleworthia satelles (SP232) 0 0 0 0 0 0 0 1 0 0 392 0 0 0 285 0 132 0 0 0 0 166 0 0 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_minutum (SP233) 0 0 73 0 0 12658 0 0 0 0 199 0 0 332 4 0 1 0 1020 0 0 159 189 0 4 938 425 0 0 3542 Porphyromonas gingivalis (SP248) 1 5 322 0 0 13 0 889 39 40 0 28 1 277 1 1 0 6 81 2 67 27 3 11 32 12 33 14 204 93 Streptococcus mutans (SP249) 132 0 1 64 0 1 0 1 0 0 0 0 2 1 0 0 2 0 1 1 1 3 0 2 0 0 0 0 2 1 Bacteroidetes_[G-5] bacterium_HMT_511 (SP251) 0 0 0 0 0 0 38 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 Atopobium sp._HMT_199 (SP252) 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 110 0 12 755 0 0 0 199 0 0 1311 2244 0 0 Sphingomonas hankookensis (SP253) 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 857 1 0 0 3 0 Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP255) 0 0 0 0 0 0 0 0 0 0 0 0 1 0 19 0 61 0 0 23773 33 1 1 0 0 8409 0 0 0 0 Haemophilus parainfluenzae (SP256) 3 7 17576 0 2 9 3 372 1947 1988 12 2663 5 2528 42 46 2 23 2 3 16 1 2 15 15 3 5 14 4 43 Atopobium sp._HMT_416 (SP291) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 113 1 1 1807 0 5 0 0 0 0 0 0 0 0 Fretibacterium sp._HMT_360 (SP292) 1 0 149 0 0 5 1021 0 0 0 0 0 57 0 65 0 1 0 2782 1 4 0 118 1 0 15 6 1 3 6 Actinomyces sp._HMT_169 (SP293) 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 3 8 0 21 0 0 0 0 0 25 0 2 115 Aggregatibacter sp._HMT_458 (SP294) 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 Bacteroidetes_[G-3] bacterium_HMT_281 (SP298) 0 0 0 1 208 0 0 0 0 0 0 0 0 1 3805 0 1 0 0 86 0 0 0 3 0 0 0 16 0 328 Capnocytophaga granulosa (SP310) 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 5 Pseudomonas aeruginosa (SP314) 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 1 6 8 1 20 75 0 1 129 0 0 0 0 38 Pseudomonas koreensis (SP316) 0 0 0 0 0 0 0 0 0 0 0 42 0 1 1 0 0 0 4 0 2 0 0 0 10 0 0 0 0 2 Erysipelotrichaceae_[G-1] bacterium_HMT_904 (SP346) 2 0 0 0 0 0 1186 0 0 0 0 0 0 0 79 0 144 0 0 380 0 1736 1399 133 0 0 0 2286 0 0 Veillonella dispar (SP351) 21 125 718 10 16 16 2 9 9 10 1 12 3 9 5 0 1 1 5 2 12 3 0 8 7 2 3 2 3 8 Mogibacterium timidum (SP360) 0 0 56 0 0 4351 1 0 0 0 96 0 91 0 220 0 219 2 1138 1348 0 13895 440 76 0 1151 1899 133 446 4280 Lautropia mirabilis (SP362) 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 19 0 0 4 0 0 2 Schaalia odontolytica (SP365) 1 0 0 3 2 0 3 1 0 0 0 0 0 0 1 30 3 120 742 44 1529 381 79 612 466 64 302 274 480 667 Gemella morbillorum (SP375) 0 4131 1 0 0 0 0 0 491 0 0 0 1 0 13 0 0 0 8 0 2 0 0 0 0 0 0 2 1 1 Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP382) 1 0 22 561 0 2621 4353 1 0 0 0 0 0 0 14 1 7 8 167 7 13 67 3 7 10 100 3 31 561 348 Prevotella oris (SP383) 5 1 0 1 0 2 1 0 0 0 12 3 0 79 1049 0 0 0 0 0 0 0 0 0 0 0 43 93 0 2 Enterobacter mori (SP393) 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 30 2 27 35 8 31 9 0 58 87 14 22 15 29 77 Pseudomonas helmanticensis (SP397) 50 10 1 0 31 117 424 1 898 4176 108 2108 0 10635 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Bifidobacterium dentium (SP398) 6 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sinensis (SP404) 14 8 11403 20 19 0 5 2322 3632 2324 11 1597 10 1533 5 2 0 1 1 8 2 1 0 14 3 5 0 0 13 28 Eggerthia catenaformis (SP408) 1 0 0 0 0 0 0 0 1 0 0 0 0 0 4073 0 0 0 0 139 0 0 0 2 0 0 0 0 0 0 Phocaeicola abscessus (SP413) 1 2 6 19574 26823 0 0 1 0 0 1093 0 1 0 0 0 0 0 7 939 10 9 1226 1 1 6 0 262 0 0 Veillonella denticariosi (SP414) 0 1 0 1 1 4 0 0 1 2 1 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Anaeroglobus geminatus (SP423) 9 3 10 940 48445 5 0 6 3 2 269 6 3 8 4 0 0 0 4334 0 0 22 61 0 0 0 0 0 0 0 Actinomyces naeslundii (SP430) 0 0 0 0 0 0 14 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 11 2 0 0 2 0 0 0 Leptotrichia sp._HMT_212 (SP433) 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 3 0 0 0 5 0 0 0 4 0 6 3 Streptococcus anginosus (SP439) 2 0 1 1 0 0 0 0 0 0 0 0 0 1 70 18 0 10 20 2 11 24 0 9 9 9 30 6 42 25 Selenomonas sp._HMT_134 (SP44) 0 0 0 0 0 0 365 0 0 0 0 0 0 0 7 0 1 0 0 0 0 0 0 2 0 0 13 2 0 1 Prevotella melaninogenica (SP442) 18 2 29 37 8 12 25 18 0 54 0 5 6 4 20 0 0 1 0 0 0 0 0 0 0 1 0 0 1 3 Fretibacterium sp._HMT_359 (SP456) 0 0 0 0 0 5 0 0 0 0 0 0 58 0 1 0 0 0 9 1 0 0 0 12 0 0 2 0 242 0 Treponema denticola (SP46) 1 1 3 0 0 7 26 0 0 0 0 0 11 0 4 0 0 0 0 0 0 0 5 0 0 0 27 0 0 33 Desulfobulbus sp._HMT_041 (SP463) 0 0 3 0 0 0 0 0 0 0 0 0 1 0 18 52 2 18 4458 10 131 1131 32 85 24 1214 50 289 5008 203 Streptococcus intermedius (SP47) 1 288 1 0 0 1 31 0 1 0 0 2 1 0 7 2 0 1 3 0 1 8 0 9 26 0 2 24 5 119 Dialister invisus (SP48) 1 0 84 0 0 0 557 0 310 1 1723 1 0 0 479 4 321 20 10 905 55 1591 21 69 22 17 681 491 3 32 Granulicatella elegans (SP486) 0 0 0 0 0 0 29 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 0 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP491) 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Leptotrichia hongkongensis (SP492) 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 1 15 0 14 0 0 6 0 0 6 0 15 189 Fusobacterium sp._HMT_203 (SP499) 0 90 3 2 1 47 16022 19 0 0 3 1 1 0 144 0 0 1 7 2 6 0 2 0 0 2 0 0 108 9 Capnocytophaga sputigena (SP50) 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 570 0 1 1 0 0 Granulicatella adiacens (SP508) 5 1 1 3 1 2 1 1 3 1207 5 0 0 0 11 0 5 42 22 10 21 13 1 14 35 10 7 2 74 293 Actinomyces sp._HMT_448 (SP509) 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 15 0 1 7 0 0 0 1 0 0 Fretibacterium fastidiosum (SP510) 0 0 0 0 1698 513 1660 0 0 0 0 0 261 0 101 4 0 0 3521 3 0 15 78 66 0 164 182 2 28538 131 Finegoldia magna (SP517) 0 0 0 0 0 0 0 2542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 3 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_952 (SP52) 0 0 0 0 1 0 1 1 0 5 2 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 Pseudoramibacter alactolyticus (SP523) 155 1 25 15993 3264 7413 0 0 0 0 527 0 773 0 1439 16 635 0 328 720 8 1591 250 108 5 411 2235 94 74 22 Fusobacterium nucleatum_subsp._vincentii (SP53) 2 11966 2 0 0 1 0 2 0 1 2 1 0 0 0 0 0 0 0 0 0 22 0 0 0 0 3 21 1 54 Cutibacterium acnes (SP537) 0 0 0 1 0 0 0 5 1 2 0 2 0 1 0 0 0 0 0 0 1 0 1 7 0 0 2 3 1 1 Prevotella histicola (SP564) 6 6 9 11 1 3 5 21 38 15 1 10 43 103 1 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP568) 0 0 0 0 0 7 0 0 0 0 0 0 0 0 205 0 1 0 0 80 0 13 0 0 0 0 1437 0 0 0 Tannerella forsythia (SP569) 0 0 220 0 1137 1 9429 0 22 0 0 0 1120 0 11 1 0 2 2300 1 0 8 17 2 0 1 7 205 1414 49 Lactobacillus gasseri (SP573) 1 0 0 0 0 0 0 0 0 0 0 0 0 0 442 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 Porphyromonas endodontalis (SP580) 0 4 0 11 1 0 258 0 0 0 0 0 0 0 25 1 0 0 409 0 0 0 0 0 0 0 0 170 0 36 Cardiobacterium valvarum (SP581) 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 Bulleidia extructa (SP602) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 13 0 0 1023 0 0 0 0 0 0 0 0 0 0 Peptidiphaga sp._HMT_183 (SP607) 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 7 0 0 2 0 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP620) 0 1 0 2044 7 19 1568 1 1 0 630 1 17527 0 791 0 712 1 0 0 13 247 0 2 0 0 0 93 0 0 Gemella haemolysans (SP621) 0 0 0 1 2 8 1 2 0 1 0 0 13 0 0 0 1 1 0 7 11 11 0 3 1 66 0 7 0 0 Actinomyces oris (SP624) 0 0 0 0 0 0 44 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 34 11 0 89 Leptotrichia buccalis (SP639) 3 1 0 0 0 1 7 0 1 0 2 2 0 2 2 0 0 0 10 0 0 0 0 0 0 0 1 2 0 2 Rothia dentocariosa (SP648) 4 2 0 9 2 3 28 9030 103 1 7 2 0 0 2 0 4 14 6 2 41 1 2 33 7 3 10 7 8 10 Rothia aeria (SP66) 0 3 0 0 0 0 46 0 0 0 1 212 0 3 0 0 0 0 42 0 0 0 4 5 36 0 8 1 6 1 Peptostreptococcaceae_[XI][G-1] bacterium_HMT_383 (SP67) 0 0 1714 0 0 12589 0 534 0 0 0 0 0 0 64 0 477 0 2438 271 0 1086 3034 4 7 757 1209 0 0 0 Staphylococcus warneri (SP673) 0 0 0 0 0 0 0 2679 0 0 0 0 0 0 0 0 0 21 17 4 5 8 1 0 0 53 30 0 44 2 Solobacterium moorei (SP677) 0 0 0 0 0 0 0 2 0 2 21 0 179 0 200 0 882 2 0 53 1 2 0 0 0 0 1817 197 12 0 Schaalia meyeri (SP681) 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 Dialister pneumosintes (SP683) 1 0 0 0 0 0 0 1 0 1 2899 0 0 0 94 0 0 0 13 19 15 40 0 51 0 0 609 314 0 21 Peptostreptococcus stomatis (SP684) 0 1097 0 0 0 15 0 0 0 0 0 0 0 0 4442 0 1155 0 6 5979 31 14617 5 50 0 3 1991 879 2 107 Streptococcus lactarius (SP69) 10 0 2219 2 0 6 1 331 96 740 2 2 1 411 0 0 0 14 0 28 0 2 0 2 1 8 2 0 29 75 Schaalia cardiffensis (SP698) 0 0 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 390 Fusobacterium nucleatum (SP70) 1 3981 5 154 0 0 1 2 0 0 0 0 1 0 0 0 0 0 1 1 0 3 0 1 0 0 1 0 0 22 Filifactor alocis (SP718) 1 0 0 1 24 0 0 0 0 0 1 0 0 1 4273 2 86 0 9964 321 50 47 0 461 26 3346 1126 356 1164 2706 Streptococcus parasanguinis_clade_411 (SP731) 8 3 2 15 0 0 0 1 13 1 9 1 0 2 81 0 8 12 7 23 11 17 0 11 11 2 4 13 0 143 Staphylococcus hominis (SP733) 0 0 0 27 18 86 1 1 1 0 0 3868 0 1 0 3 0 11 10 6 21 13 0 2 22 13 6 29 30 23 Johnsonella sp._HMT_166 (SP74) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 22 0 0 0 0 0 0 0 18 Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 (SP759) 0 0 0 0 0 174 0 0 0 0 0 0 0 0 12 0 1 0 440 6 0 34 0 17 0 261 0 6 0 160 Veillonella atypica (SP762) 11 4 6 15 7 4 2 10 6 6 9 3 6 30 6 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 Neisseria flavescens (SP786) 0 0 0 0 0 0 0 1 0 0 0 0 0 0 22 0 0 0 0 0 0 12 0 0 0 1 0 0 0 0 Caldibacillus hisashii (SP787) 0 9 0 0 0 0 0 0 791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 Parvimonas micra (SP8) 1 23747 0 0 1 39 1537 1 0 0 3 0 4 5 13911 17 74203 7 54 34922 229 193 13 186 83 0 10131 2281 32888 13807 Methylobacterium radiotolerans (SP81) 1 0 0 0 0 1 0 1 0 1 0 0 0 2 0 9 0 34 1 0 0 8 0 0 6 0 0 25 6083 0 Eikenella corrodens (SP817) 0 403 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 18 Brevundimonas bacteroides (SP82) 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 9 0 2 1 778 0 0 0 0 0 Selenomonas sputigena (SP83) 0 0 0 0 0 0 0 0 0 0 1 0 0 0 26 0 1 1 3 1 1 3 0 0 0 0 12 6 0 12 Moraxella osloensis (SP847) 0 0 0 0 0 0 0 512 425 0 0 0 0 0 2 0 0 0 1 0 9 0 0 1 7 1 0 0 0 0 Treponema maltophilum (SP85) 0 0 0 0 0 9 36 0 0 0 0 0 107 0 0 0 0 6 282 0 0 3 1 4 0 0 7 0 0 0 Veillonellaceae_[G-1] bacterium_HMT_129 (SP868) 0 0 0 0 1 0 1 0 0 0 0 0 3820 0 17 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 Cardiobacterium hominis (SP87) 0 0 2 0 0 0 836 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 2 0 0 0 Streptococcus gordonii (SP9) 29 0 8 1 0 0 1 12 9 13 0 1 0 15 1 62 2 134 47 6 29 13 1 38 1 25 52 2 395 3319 Oribacterium sp._HMT_102 (SP91) 0 0 0 1 0 0 0 0 1 1 1 2 0 2 56 0 0 0 0 241 0 544 15 274 0 0 0 0 0 0 Stenotrophomonas pavanii_nov_97.902% (SPN100) 18 60 0 63 35 107 168 2607 2 14578 379 7932 11 10356 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 Streptococcus gordonii_nov_95.814% (SPN102) 0 0 312 0 0 0 0 8 13 24 0 1 0 12 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_minutum_nov_97.044% (SPN114) 0 0 0 0 0 1254 0 0 0 0 4 0 0 0 0 1 0 0 0 1 0 2 0 0 0 45 1 0 1 23 Stomatobaculum sp._HMT_373_nov_94.581% (SPN127) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 175 0 693 0 0 349 0 5 0 0 0 4 22 0 0 30 Filifactor villosus_nov_93.300% (SPN182) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 388 0 49 0 0 36 0 0 0 0 0 2 7 0 80 28 Peptostreptococcaceae_[XI][G-1] bacterium_HMT_383_nov_95.332% (SPN2) 0 0 4 0 0 1906 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 28 0 0 0 0 Veillonella atypica_nov_90.000% (SPN203) 2 1 231 0 0 0 0 4 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 Comamonas faecalis_nov_97.674% (SPN205) 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0 Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091_nov_97.537% (SPN208) 0 0 0 0 0 0 153 0 0 0 0 0 0 0 0 0 1 0 0 2 3 0 0 0 0 39 160 0 268 0 Parvimonas micra_nov_93.103% (SPN210) 0 1 0 0 0 2 0 0 0 0 0 0 0 0 204 0 548 0 0 70 0 0 0 0 0 0 11 0 4 0 Mogibacterium timidum_nov_95.792% (SPN213) 0 0 1 0 0 761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 18 Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369_nov_94.595% (SPN217) 0 0 2 0 0 725 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 Peptostreptococcaceae_[XI][G-1] bacterium_HMT_383_nov_94.595% (SPN219) 0 0 3 0 0 689 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum_nov_95.567% (SPN220) 0 0 0 0 0 0 0 0 0 0 0 0 685 0 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus pseudoporcinus_nov_93.488% (SPN224) 0 9 0 0 0 0 0 0 16 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 2 0 1 0 0 Fretibacterium fastidiosum_nov_87.407% (SPN225) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 6 0 0 0 0 0 0 2 0 0 171 0 Sneathia sanguinegens_nov_95.823% (SPN228) 0 0 0 0 0 3 0 0 0 0 4 0 0 0 565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 Filifactor alocis_nov_94.828% (SPN230) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 1 0 0 11 20 Desulfobulbus sp._HMT_041_nov_90.255% (SPN232) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 34 0 0 13 1 Parvimonas micra_nov_97.519% (SPN234) 0 15 0 0 0 0 11 0 0 0 0 0 0 0 61 0 198 0 0 60 0 2 0 0 0 0 1 0 1 0 Peptostreptococcus stomatis_nov_95.037% (SPN24) 0 243 0 0 0 0 0 0 0 0 0 0 0 0 497 0 338 0 0 643 0 19 0 0 0 0 9 0 0 1 Schnuerera ultunensis_nov_92.840% (SPN259) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 25 0 0 147 1 1 0 0 0 133 0 0 0 436 Peptoniphilaceae_[G-1] bacterium_HMT_113_nov_96.782% (SPN278) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 37 0 0 2372 0 0 0 0 0 9 0 0 0 0 Enterococcus faecalis_nov_97.669% (SPN300) 0 0 0 0 0 2 1 186 21 165 3 649 0 41 0 368 1 268 9 2 0 0 0 3 0 211 0 0 142 14 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_minutum_nov_94.349% (SPN47) 0 0 6 0 0 1687 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 28 1 0 0 0 Enterococcus columbae_nov_94.651% (SPN59) 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 1 0 0 0 0 Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(20 species) (SPP10) 0 1 204 0 0 0 0 94 0 83 2 0 0 17 0 0 0 1 1 2 2 0 0 1 0 1 0 0 1 7 Streptococcus parasanguinis_parasanguinis_clade_721_sp._HMT_066 (SPP100) 3 1 2 19 1 0 0 0 2 2 5 1 1 5 11 0 6 9 7 18 8 10 3 1 2 3 0 0 0 4 Fusobacterium nucleatum_nucleatum_subsp._nucleatum_simiae (SPP102) 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum (SPP104) 1 2 0 0 0 2 0 1596 0 0 0 1 1 1 7 0 0 5 3 0 0 0 5 0 0 1 11 6 35 21 Kocuria atrinae_carniphila_gwangalliensis (SPP106) 0 0 0 0 0 0 2 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2833 0 0 0 0 0 Lacticaseibacillus_Lactobacillus casei_rhamnosus (SPP107) 0 0 0 0 0 0 0 0 1624 0 0 0 0 0 0 19 0 4 0 0 0 9 0 8 0 0 0 0 0 0 Hallella_Prevotella dentalis_seregens (SPP112) 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 10 0 0 0 0 3 0 691 1 Selenomonas infelix_sp._HMT_479_sp._HMT_481 (SPP114) 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 Serratia grimesii_liquefaciens (SPP117) 0 0 0 11 4 14 0 0 0 539 0 0 1 0 0 0 0 0 16 0 37 18 1 9 15 0 0 39 3 24 Campylobacter rectus_showae (SPP118) 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3 0 178 2 Streptococcus cristatus_downii_gwangjuense_infantis_infantis_cla ...(17 species) (SPP12) 107 23 2944 9 30 109 21 2851 279 3676 24 16 16 1241 32 126 38 161 142 71 249 49 30 717 190 139 224 89 1356 1507 Peptoniphilus gorbachii_lacydonensis_sp._HMT_187 (SPP120) 0 0 0 0 0 0 0 0 1794 0 0 0 23 0 0 0 0 0 0 49 7 0 0 3 0 0 0 0 0 0 Anaerococcus prevotii_tetradius (SPP121) 0 0 0 0 0 0 0 311 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 4 0 0 0 0 0 Acinetobacter_Prolinoborus fasciculus_lwoffii (SPP122) 0 0 0 0 0 0 0 0 0 0 564 0 0 0 0 0 0 0 0 0 44 0 0 0 1299 0 0 0 0 0 Ralstonia insidiosa_sp._HMT_406 (SPP123) 3 0 0 0 0 11 0 1003 0 0 0 0 0 0 1 13 0 1 0 0 0 3 0 0 12 0 0 0 7 0 Streptococcus salivarius_vestibularis (SPP129) 12 0 0 6 0 1 13 1 5 1 38 1 0 5 42 248 5 79 87 23 171 90 1 106 29 164 50 48 1504 383 Streptococcus lactarius_peroris (SPP131) 0 0 0 0 0 0 0 0 2 1 3 0 0 3 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 Micrococcus antarcticus_endophyticus_luteus_yunnanensis (SPP133) 0 0 0 0 0 0 0 1155 3 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 2671 0 3 0 0 0 Delftia lacustris_tsuruhatensis (SPP140) 0 0 0 0 0 0 0 0 0 0 0 1001 0 0 0 0 0 0 4 0 0 0 0 0 0 0 5 0 0 1 Janibacter_Knoellia_Pedococcus_Phycicoccus anophelis_badiiscoriae_hoylei_limosus_locipacati_m ...(8 species) (SPP141) 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 2 0 0 887 0 0 0 0 6 Atopobium_Lancefieldella rimae (SPP143) 0 0 0 0 0 3 1 0 0 0 140 0 0 0 0 0 108 1 0 1 0 0 0 0 0 0 0 0 0 0 Sphingomonas paucimobilis_pseudosanguinis_sanguinis_yabuuchiae (SPP146) 2 0 0 0 2 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 577 0 0 0 0 0 Brevundimonas bullata_halotolerans (SPP156) 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1579 0 0 0 0 0 Acinetobacter calcoaceticus_pittii (SPP16) 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 5 0 0 4 2 0 5 0 2 0 Aerococcus urinaeequi_viridans (SPP162) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 670 16 452 360 26 528 181 27 5057 326 327 179 240 3406 1263 Treponema maltophilum_sp._HMT_260 (SPP17) 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 261 0 0 0 0 0 0 0 0 0 162 0 Staphylococcus edaphicus_saprophyticus (SPP18) 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 30 1 0 25 0 11 4 0 12 0 10 14 18 85 102 Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP2) 18 40 13 262 828 30 37 18 7 12 7 8 14279 38 155 0 0 0 1 6 0 10 0 28 0 0 77 71 0 0 Neisseria flava_macacae_mucosa_sicca (SPP23) 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 13 0 3 7 1 5 0 0 57 0 6 34 8 58 111 Veillonellaceae_[G-1] bacterium_HMT_135_bacterium_HMT_483 (SPP32) 0 4 0 0 22 9 26 275 959 0 84 0 0 1304 6 8 0 1 0 0 8 0 0 4 6 0 2 1 27 0 Enterococcus canintestini_dispar_saigonensis (SPP35) 0 0 0 0 0 0 5 460 0 0 0 0 0 445 0 33 3 82 3 2 8 0 0 4 14 11 1 0 46 1 Parvimonas_Peptostreptococcus Candidatus massiliensis_sp._HMT_110_sp._HMT_393 (SPP36) 2 23 0 0 2 2 882 0 0 0 0 0 0 2192 3937 1 327 0 62 13 178 16449 19 84 46 0 31 135 14 22 Staphylococcus capitis_caprae (SPP39) 1 0 0 1 0 12 14 267 37 149 31 480 0 120 3 106 1 95 3 3 6 5 0 1 0 540 3 0 192 23 Staphylococcus capitis_caprae_epidermidis (SPP40) 20 7 2 50 23 87 132 4210 194 1057 150 5522 1 1065 56 335 6 543 280 38 306 1698 14 194 361 11060 310 198 2686 800 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP44) 0 0 0 0 0 0 0 0 0 0 0 0 3328 0 13 5 0 0 2 0 9 12 0 0 0 0 4 1 0 2 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka (SPP45) 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 Catonella morbi_sp._HMT_164 (SPP47) 0 1 0 0 0 0 146 0 0 0 0 0 231 0 0 0 0 0 7 0 0 0 0 4 0 0 4 0 0 0 Enterococcus casseliflavus_gallinarum (SPP52) 0 0 0 24 0 1 23 910 0 0 0 0 0 804 0 19 3 51 41 1 119 10 4 23 32 17 40 32 193 27 Brucella_Ochrobactrum abortus_anthropi_canis_ceti_cytisi_grignonensis_ha ...(19 species) (SPP58) 0 41 0 0 0 0 0 0 0 790 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 Veillonellaceae_[G-1] bacterium_HMT_132_bacterium_HMT_150 (SPP59) 0 0 0 0 0 0 17 0 0 0 7 0 1039 0 30 0 3 0 531 2 0 1 67 0 0 0 0 0 0 0 Aggregatibacter segnis_sp._HMT_512 (SPP61) 0 4 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 Pseudomonas azotoformans_lactis_paralactis (SPP62) 0 0 0 0 0 0 0 0 0 0 0 362 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 Pseudomonas baetica_migulae_umsongensis (SPP65) 2 0 0 0 0 3 7 0 0 0 0 0 0 1269 0 0 0 0 3 0 23 0 0 4 0 0 13 14 118 18 Streptococcus lactarius_sinensis (SPP67) 0 0 592 1 0 0 0 47 31 131 0 0 0 71 0 1 0 3 1 3 0 0 0 0 0 0 0 0 1 0 Methylobacterium bullatum_marchantiae (SPP69) 0 0 0 0 0 0 0 0 0 1587 1 0 0 192 0 54 0 0 3 6 6 0 0 0 0 3 21 0 0 0 Streptococcus cristatus_cristatus_clade_578 (SPP7) 13 2 2589 2 0 4 3 2589 196 773 3 42 0 397 3 18 7 52 26 17 30 8 2 21 4 27 5 8 243 1538 Lachnoanaerobaculum gingivalis_umeaense (SPP70) 0 0 1 0 1 0 1 0 315 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Fusobacterium naviforme_nucleatum_sp._HMT_204 (SPP72) 1 1700 168 0 0 3 16 2 0 0 0 1 91 2 15 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 Pinus_Triticum aestivum_sylvestris (SPP75) 0 0 0 0 0 0 0 1132 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 Streptococcus anginosus_constellatus (SPP78) 0 0 0 0 0 0 0 0 0 0 0 1 0 0 435 5 15 0 23 1 46 31 0 31 38 0 4 62 33 12580 Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(18 species) (SPP8) 10 2 610 2 2 12 2 310 60 580 2 1 0 198 1 40 3 24 14 7 2 2 0 2 9 21 2 0 90 80 Enterobacter asburiae_cancerogenus_cloacae_hormaechei (SPP88) 8 3 6 3 14 15 5 5 12 9 5 11 4 26 9 9 0 6 19 0 32 23 0 18 291 8 11 8 58 6 Fusobacterium nucleatum_nucleatum_subsp._vincentii (SPP94) 6 110 3 138 3 3 19 1 2 5 0 3 4 3 24 1 0 1 0 0 0 1 18 0 1 2 51 113 3 0 Streptococcus multispecies_sppn14_4_nov_90.531% (SPPN14) 0 1 188 0 0 1 0 6 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 8 0 0 0 0 1 0 multigenus multispecies_sppn22_3_nov_94.103% (SPPN22) 0 41 0 0 0 0 16 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 66 31 Enterococcus multispecies_sppn23_2_nov_96.512% (SPPN23) 0 0 0 0 0 0 0 4 2 43 0 0 0 4 0 1 2 4 0 0 0 0 0 0 0 1 0 0 1 2 multigenus multispecies_sppn24_3_nov_89.851% (SPPN24) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 490 0 0 8 0 0 0 0 0 0 6 0 1 0 Streptococcus multispecies_sppn34_17_nov_95.592% (SPPN34) 0 0 0 1 0 0 0 2 0 149 0 0 0 0 0 0 1 1 1 2 4 0 3 1 0 1 0 0 0 2 multigenus multispecies_sppn6_3_nov_96.535% (SPPN6) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 18 0 0 1227 0 0 0 0 0 0 0 0 0 0