Taxon S001 S002 S003 S004 S005 S006 S007 S008 S009 S010 S011 S012 S013 S014 S015 S091 S092 S093 S094 S095 S096 S097 S098 S099 S100 S101 S102 S103 S104 S105 Actinomyces israelii (SP10) 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Fusobacterium nucleatum_subsp._animalis (SP104) 1 3 0 227 1 2 41 4 0 0 1 0 4 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 Micrococcus cohnii (SP105) 0 0 0 0 0 6 0 212 6 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 Pelomonas aquatica (SP125) 0 0 0 0 0 0 0 0 256 0 0 0 0 0 0 0 0 167 0 0 9 4 0 22 0 105 5608 1 0 0 Campylobacter gracilis (SP138) 1 1876 0 11651 68 0 0 1 1 0 1 0 0 0 12 0 1 1 1 0 0 0 0 0 5 0 1 1 0 0 Selenomonas noxia (SP140) 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 2 0 0 Streptococcus sanguinis (SP150) 45 6 1901 555 1 36 88 3 5 27 0 5 1 250 1 4 0 1 0 0 0 11 0 0 0 0 0 0 0 2 Corynebacterium durum (SP161) 2 0 0 0 0 0 262 1469 0 0 1 269 0 2 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 76 Stutzerimonas stutzeri (SP164) 0 0 1 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 12 0 0 0 33 0 0 0 0 0 0 Corynebacterium matruchotii (SP18) 0 0 1 1 0 1 0 0 0 0 4 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Peptococcus sp._HMT_167 (SP192) 0 0 0 0 0 0 19 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Oribacterium sp._HMT_078 (SP193) 2 1 2 0 2 1 3 1 0 2 7357 0 1 0 530 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Micrococcus aloeverae (SP195) 0 0 0 0 0 0 0 1739 119 0 0 70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 280 Enterococcus faecalis (SP200) 155 24 0 165 7 140 59 1809 2991 5295 102 4006 1 1183 38 5367 2 985 8896 128 220 401 143 456 0 4 0 0 0 4112 Veillonella parvula (SP202) 11 3 270 3 5 7 0 3 2 0 4 2 2 4 22 0 0 172 0 0 40 0 1 0 0 0 0 0 0 0 Alloprevotella tannerae (SP217) 2 0 0 0 0 0 208 0 0 0 3 0 88 0 19 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Porphyromonas gingivalis (SP248) 1 5 322 0 0 13 0 889 39 40 0 28 1 277 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Sphingomonas hankookensis (SP253) 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 35 0 0 0 27 0 509 0 0 0 0 Haemophilus parainfluenzae (SP256) 3 7 17576 0 2 9 3 372 1947 1988 12 2663 5 2528 42 0 0 0 0 13 0 0 2 0 0 0 0 0 0 0 Actinomyces sp._HMT_169 (SP293) 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 181 0 0 0 Aggregatibacter sp._HMT_458 (SP294) 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 73 0 0 0 0 0 0 0 0 0 0 0 0 Capnocytophaga granulosa (SP310) 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 372 0 444 0 0 0 0 0 0 0 0 0 0 0 0 Pseudomonas koreensis (SP316) 0 0 0 0 0 0 0 0 0 0 0 42 0 1 1 8 0 0 0 4 3 0 1 13 0 0 0 0 0 0 Veillonella dispar (SP351) 21 125 718 10 16 16 2 9 9 10 1 12 3 9 5 0 0 379 1 0 0 0 0 0 1 0 0 0 0 3 Lautropia mirabilis (SP362) 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 317 0 0 0 0 Prevotella intermedia (SP363) 3 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 169 0 0 0 0 0 0 0 0 0 0 0 0 Gemella morbillorum (SP375) 0 4131 1 0 0 0 0 0 491 0 0 0 1 0 13 0 46 0 0 19 37 174 57 1 0 0 0 0 0 0 Enterobacter mori (SP393) 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 66 0 0 Streptococcus sinensis (SP404) 14 8 11403 20 19 0 5 2322 3632 2324 11 1597 10 1533 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Veillonella denticariosi (SP414) 0 1 0 1 1 4 0 0 1 2 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces naeslundii (SP430) 0 0 0 0 0 0 14 0 0 0 0 2 0 0 0 0 0 35 0 16 0 0 0 0 0 0 0 0 0 0 Prevotella melaninogenica (SP442) 18 2 29 37 8 12 25 18 0 54 0 5 6 4 20 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Bacteroidales_[G-2] bacterium_HMT_274 (SP462) 1 0 1 0 0 0 153 0 0 5 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 Desulfobulbus sp._HMT_041 (SP463) 0 0 3 0 0 0 0 0 0 0 0 0 1 0 18 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 Streptococcus intermedius (SP47) 1 288 1 0 0 1 31 0 1 0 0 2 1 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Leptotrichia hongkongensis (SP492) 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 Fusobacterium sp._HMT_203 (SP499) 0 90 3 2 1 47 16022 19 0 0 3 1 1 0 144 0 1 192 22 21 13 2 20 1 1 0 0 0 0 15814 Granulicatella adiacens (SP508) 5 1 1 3 1 2 1 1 3 1207 5 0 0 0 11 354 0 0 0 0 0 1 0 1 0 0 0 0 0 0 Fusobacterium nucleatum_subsp._vincentii (SP53) 2 11966 2 0 0 1 0 2 0 1 2 1 0 0 0 0 1 0 1 0 4 0 0 0 0 0 0 0 0 0 Cutibacterium acnes (SP537) 0 0 0 1 0 0 0 5 1 2 0 2 0 1 0 123 0 87 0 8 3 0 2 11 0 35 0 0 0 170 Porphyromonas endodontalis (SP580) 0 4 0 11 1 0 258 0 0 0 0 0 0 0 25 1 0 99 0 0 0 0 0 0 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP620) 0 1 0 2044 7 19 1568 1 1 0 630 1 17527 0 791 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Actinomyces oris (SP624) 0 0 0 0 0 0 44 0 0 0 0 0 1 0 0 0 0 0 0 0 0 8 0 0 0 0 3 0 0 0 Leptotrichia buccalis (SP639) 3 1 0 0 0 1 7 0 1 0 2 2 0 2 2 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 Rothia dentocariosa (SP648) 4 2 0 9 2 3 28 9030 103 1 7 2 0 0 2 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 Rothia aeria (SP66) 0 3 0 0 0 0 46 0 0 0 1 212 0 3 0 1 0 1 0 0 0 11 0 0 0 14 0 7 0 2 Staphylococcus warneri (SP673) 0 0 0 0 0 0 0 2679 0 0 0 0 0 0 0 0 0 0 6644 0 0 0 0 16 17 252 1176 0 0 2 Dialister pneumosintes (SP683) 1 0 0 0 0 0 0 1 0 1 2899 0 0 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Peptostreptococcus stomatis (SP684) 0 1097 0 0 0 15 0 0 0 0 0 0 0 0 4442 251 0 0 0 25 14 27 16 52 0 0 17 0 0 0 Streptococcus lactarius (SP69) 10 0 2219 2 0 6 1 331 96 740 2 2 1 411 0 13 0 0 0 4 3 13 3 2 21 0 0 0 0 0 Fusobacterium nucleatum (SP70) 1 3981 5 154 0 0 1 2 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Aeromonas popoffii (SP705) 0 0 0 0 0 0 0 1393 0 0 6 0 0 0 0 0 0 0 0 0 0 28 0 6 0 0 0 0 0 0 Filifactor alocis (SP718) 1 0 0 1 24 0 0 0 0 0 1 0 0 1 4273 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Streptococcus parasanguinis_clade_411 (SP731) 8 3 2 15 0 0 0 1 13 1 9 1 0 2 81 296 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Staphylococcus hominis (SP733) 0 0 0 27 18 86 1 1 1 0 0 3868 0 1 0 0 0 0 2 0 5 0 0 0 0 1 0 0 0 0 Johnsonella sp._HMT_166 (SP74) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 5751 0 0 0 Veillonella atypica (SP762) 11 4 6 15 7 4 2 10 6 6 9 3 6 30 6 0 0 0 1 0 0 47 0 21 0 0 0 0 0 0 Neisseria flavescens (SP786) 0 0 0 0 0 0 0 1 0 0 0 0 0 0 22 1273 1 0 0 0 0 1 1 0 0 0 0 0 0 1 Caldibacillus hisashii (SP787) 0 9 0 0 0 0 0 0 791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1133 Parvimonas micra (SP8) 1 23747 0 0 1 39 1537 1 0 0 3 0 4 5 13911 0 0 0 0 0 1 61 0 0 0 1 0 0 0 0 Methylobacterium radiotolerans (SP81) 1 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Prevotella denticola (SP825) 4 1 0 0 0 1 0 0 0 0 5 0 0 0 101 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 Moraxella osloensis (SP847) 0 0 0 0 0 0 0 512 425 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus gordonii (SP9) 29 0 8 1 0 0 1 12 9 13 0 1 0 15 1 511 0 0 279 0 0 1 0 0 0 0 0 0 0 1 Stenotrophomonas pavanii_nov_97.902% (SPN100) 18 60 0 63 35 107 168 2607 2 14578 379 7932 11 10356 1 0 0 0 0 0 0 0 0 27 0 0 0 0 0 864 Streptococcus gordonii_nov_95.814% (SPN102) 0 0 312 0 0 0 0 8 13 24 0 1 0 12 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Veillonella atypica_nov_90.000% (SPN203) 2 1 231 0 0 0 0 4 0 0 0 1 1 1 0 0 0 2 0 0 2 6 0 1 0 0 0 0 0 0 Streptococcus pseudoporcinus_nov_93.488% (SPN224) 0 9 0 0 0 0 0 0 16 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 0 0 Enterococcus faecalis_nov_97.669% (SPN300) 0 0 0 0 0 2 1 186 21 165 3 649 0 41 0 0 0 6 153 0 0 2 0 0 0 0 0 0 0 17 Fusobacterium nucleatum_nucleatum_subsp._animalis_simiae (SPP1) 2 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(20 species) (SPP10) 0 1 204 0 0 0 0 94 0 83 2 0 0 17 0 1 3 0 0 4 3 1 4 3 2 0 0 0 0 0 Streptococcus parasanguinis_parasanguinis_clade_721_sp._HMT_066 (SPP100) 3 1 2 19 1 0 0 0 2 2 5 1 1 5 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Fusobacterium nucleatum_nucleatum_subsp._nucleatum_simiae (SPP102) 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 108 Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum (SPP104) 1 2 0 0 0 2 0 1596 0 0 0 1 1 1 7 0 1 0 1335 0 1 0 0 0 0 0 0 0 0 0 Pseudomonas brenneri_proteolytica (SPP108) 13 0 0 0 5 0 0 446 0 0 0 4 0 864 0 1 0 0 0 0 0 0 0 25 0 0 0 0 0 0 Selenomonas infelix_sp._HMT_479_sp._HMT_481 (SPP114) 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Streptococcus cristatus_downii_gwangjuense_infantis_infantis_cla ...(17 species) (SPP12) 107 23 2944 9 30 109 21 2851 279 3676 24 16 16 1241 32 1365 22886 789 2 18691 15415 21451 20798 14058 906 0 0 0 0 1 Peptoniphilus gorbachii_lacydonensis_sp._HMT_187 (SPP120) 0 0 0 0 0 0 0 0 1794 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1732 0 0 Acinetobacter_Prolinoborus fasciculus_lwoffii (SPP122) 0 0 0 0 0 0 0 0 0 0 564 0 0 0 0 3671 1 0 0 591 76 54 95 705 0 0 0 0 0 0 Ralstonia insidiosa_sp._HMT_406 (SPP123) 3 0 0 0 0 11 0 1003 0 0 0 0 0 0 1 792 0 328 0 0 0 0 0 0 0 0 0 0 0 0 Brevibacterium celere_epidermidis_iodinum_sanguinis_sediminis (SPP126) 0 0 0 0 0 0 0 0 3 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 557 Streptococcus salivarius_vestibularis (SPP129) 12 0 0 6 0 1 13 1 5 1 38 1 0 5 42 169 0 0 0 0 0 8 0 0 8062 0 0 0 0 0 Streptococcus lactarius_peroris (SPP131) 0 0 0 0 0 0 0 0 2 1 3 0 0 3 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Micrococcus antarcticus_endophyticus_luteus_yunnanensis (SPP133) 0 0 0 0 0 0 0 1155 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Delftia lacustris_tsuruhatensis (SPP140) 0 0 0 0 0 0 0 0 0 0 0 1001 0 0 0 214 1 1 0 0 0 42 0 0 0 0 0 0 0 0 Sphingomonas paucimobilis_pseudosanguinis_sanguinis_yabuuchiae (SPP146) 2 0 0 0 2 1 0 0 0 0 1 1 0 1 0 50 0 0 0 143 0 1 21 43 0 16 0 0 0 0 Staphylococcus edaphicus_saprophyticus (SPP18) 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 105 Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP2) 18 40 13 262 828 30 37 18 7 12 7 8 14279 38 155 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 Psychrobacter alimentarius_aquaticus_vallis (SPP22) 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 570 1 1 0 201 529 82 61 227 0 0 0 0 0 76 Neisseria flava_macacae_mucosa_sicca (SPP23) 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 Enterococcus canintestini_dispar_saigonensis (SPP35) 0 0 0 0 0 0 5 460 0 0 0 0 0 445 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 Parvimonas_Peptostreptococcus Candidatus massiliensis_sp._HMT_110_sp._HMT_393 (SPP36) 2 23 0 0 2 2 882 0 0 0 0 0 0 2192 3937 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Staphylococcus capitis_caprae (SPP39) 1 0 0 1 0 12 14 267 37 149 31 480 0 120 3 0 0 3 54 0 1 6 0 0 0 0 0 1 0 52 Staphylococcus capitis_caprae_epidermidis (SPP40) 20 7 2 50 23 87 132 4210 194 1057 150 5522 1 1065 56 0 0 380 2516 25 0 69 0 0 0 8 1 17 0 2712 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP44) 0 0 0 0 0 0 0 0 0 0 0 0 3328 0 13 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 Veillonellaceae_[G-1] bacterium_HMT_132_bacterium_HMT_150 (SPP59) 0 0 0 0 0 0 17 0 0 0 7 0 1039 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Aggregatibacter segnis_sp._HMT_512 (SPP61) 0 4 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Pseudomonas azotoformans_lactis_paralactis (SPP62) 0 0 0 0 0 0 0 0 0 0 0 362 0 0 0 2277 0 0 0 2748 388 735 539 3396 0 0 46 0 0 1 Streptococcus lactarius_sinensis (SPP67) 0 0 592 1 0 0 0 47 31 131 0 0 0 71 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Streptococcus cristatus_cristatus_clade_578 (SPP7) 13 2 2589 2 0 4 3 2589 196 773 3 42 0 397 3 36 1 0 0 1 2 10 5 4 38 1 0 0 0 0 Fusobacterium naviforme_nucleatum_sp._HMT_204 (SPP72) 1 1700 168 0 0 3 16 2 0 0 0 1 91 2 15 1 0 0 0 0 0 0 1 1 0 0 0 0 0 86 Streptococcus anginosus_constellatus (SPP78) 0 0 0 0 0 0 0 0 0 0 0 1 0 0 435 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(18 species) (SPP8) 10 2 610 2 2 12 2 310 60 580 2 1 0 198 1 49 8 2 0 22 32 47 32 44 33 0 0 0 0 0 Sphingomonas aerolata_aurantiaca_faeni_ginsenosidivorax_olei_pa ...(6 species) (SPP81) 135919 1 1 379 3 197 70 1 2 2506 222 1442 0 754 25 241 0 0 0 214 210 86 50 314 0 5 29 1737 0 0 Enterobacter asburiae_cancerogenus_cloacae_hormaechei (SPP88) 8 3 6 3 14 15 5 5 12 9 5 11 4 26 9 0 0 0 0 0 0 2 0 19 0 2 5 6 0 0 Streptococcus multispecies_sppn14_4_nov_90.531% (SPPN14) 0 1 188 0 0 1 0 6 1 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Enterococcus multispecies_sppn23_2_nov_96.512% (SPPN23) 0 0 0 0 0 0 0 4 2 43 0 0 0 4 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Streptococcus multispecies_sppn34_17_nov_95.592% (SPPN34) 0 0 0 1 0 0 0 2 0 149 0 0 0 0 0 4 0 0 0 1 0 0 9 0 0 0 0 0 0 0