Domain Phylum Class Order Family Genus Species SP1 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_392 SP100 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella veroralis SPP1 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_313_veroralis SP101 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Shuttleworthia satelles SPP2 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) SPP3 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus gordonii_himalayensis_sp._HMT_056 SPP5 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) SP120 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella micans SP121 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Lachnoanaerobaculum orale SP122 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria oralis SP127 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella fusca SPP8 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella fusca_histicola_jejuni_melaninogenica_scopos_sp._H ...(7 species) SPP9 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 SP137 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Megasphaera micronuciformis SP138 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas dianae SPP11 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Centipeda_Selenomonas dianae_noxia_periodontii SP139 Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae Desulfobulbus sp._HMT_041 SP15 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella salivae SP152 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella sp._HMT_780 SP153 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_256 SPP14 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Catonella morbi_sp._HMT_164 SP155 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Catonella morbi SP156 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcaceae_[G-1] bacterium_HMT_075 SP159 Bacteria Bacteroidetes Bacteroidetes_[C-1] Bacteroidetes_[O-1] Bacteroidetes_[F-1] Bacteroidetes_[G-3] bacterium_HMT_280 SP16 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter actinomycetemcomitans SP160 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia buccalis SPP16 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia buccalis_sp._HMT_225 SP161 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Tannerella serpentiformis SP169 Bacteria Bacteroidetes Bacteroidetes_[C-1] Bacteroidetes_[O-1] Bacteroidetes_[F-1] Bacteroidetes_[G-5] bacterium_HMT_505 SP17 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 SP170 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Oribacterium sp._HMT_102 SP174 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_914 SP175 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_309 SP176 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas noxia SP19 Bacteria Firmicutes Clostridia Eubacteriales Eubacteriaceae Pseudoramibacter alactolyticus SPP25 Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus delbrueckii_equicursoris_leichmannii SP203 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella sp._HMT_917 SP204 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Peptidiphaga gingivicola SP206 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella oulorum SP208 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Lachnospiraceae_[G-8] bacterium_HMT_500 SPP28 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema medium_sp._HMT_230_sp._HMT_237_vincentii SP216 Bacteria Firmicutes Bacilli Lactobacillales Aerococcaceae Abiotrophia defectiva SP217 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella pleuritidis SP220 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella koreensis SPP31 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Lachnoanaerobaculum gingivalis_umeaense SP23 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_300 SPP33 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) SPP34 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) SPP35 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus lactarius_peroris_sp._HMT_074 SP243 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Butyrivibrio sp._HMT_455 SP248 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas gingivalis SPP39 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria cinerea_flavescens_perflava_subflava SP253 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Dialister invisus SP254 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_225 SP255 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella multisaccharivorax SP256 Bacteria Synergistetes Synergistia Synergistales Synergistaceae Fretibacterium fastidiosum SP257 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella baroniae SP266 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Stomatobaculum longum SP267 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella pallens SP269 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum SP278 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_472 SPP44 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella loescheii_sp._HMT_472 SPP45 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas pasteri_sp._HMT_278 SPP46 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas catoniae_pasteri_sp._HMT_278 SP282 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilaceae Parvimonas micra SPP47 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilaceae_Peptostreptococcaceae_[XI] Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) SP283 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter gracilis SP285 Bacteria Bacteroidetes Bacteroidetes_[C-1] Bacteroidetes_[O-1] Bacteroidetes_[F-1] Bacteroidetes_[G-5] bacterium_HMT_507 SP286 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_417 SP290 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilaceae Peptoniphilaceae_[G-1] bacterium_HMT_113 SP291 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella multiformis SP292 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia shahii SP293 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum SPP51 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 SPP52 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) SPP53 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) SPP54 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii SPP55 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum_nucleatum_subsp._animalis SP294 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter concisus SP295 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_909 SP297 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudostreptobacillus hongkongensis SP298 Bacteria Proteobacteria Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium valvarum SPP57 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella parvula_rogosae_tobetsuensis SP300 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella denticola SP301 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 SP304 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus hongkongensis SPP60 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) SPP61 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium hwasookii_sp._HMT_370 SP307 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella intermedia SPP62 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_306_vespertina SPP63 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_313_sp ...(7 species) SP310 Bacteria Firmicutes Bacilli Lactobacillales Carnobacteriaceae Granulicatella adiacens SP313 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Ottowia sp._HMT_894 SP323 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Oribacterium sp._HMT_078 SP328 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Coriobacteriaceae Atopobium sp._HMT_199 SP329 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia aeria SP330 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidales_[F-2] Bacteroidales_[G-2] bacterium_HMT_274 SP332 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Kingella oralis SP333 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_257 SP337 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp._HMT_901 SP338 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Oribacterium parvum SPP66 Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Peptococcus sp._HMT_167_sp._HMT_168 SPP67 Bacteria Firmicutes Clostridia Clostridiales_Eubacteriales Peptostreptococcaceae_Peptostreptococcaceae_[XI] Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae SP342 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria sp._HMT_018 SP343 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_443 SP344 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella shahii SPP69 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella shahii_sp._HMT_317 SP345 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus intermedius SP346 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_313 SPP70 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_313 ...(6 species) SPP71 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella jejuni_sp._HMT_313 SPP72 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella jejuni_scopos_sp._HMT_313_sp._HMT_314 SP347 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella tannerae SPP73 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp._HMT_442_sputigena SP355 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema socranskii SP357 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter sp._HMT_044 SP36 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella melaninogenica SPP74 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Moraxella bovoculi_equi_lacunata_sp._HMT_276 SP365 Eukaryota Streptophyta Pinopsida Pinales Pinaceae Pinus sylvestris SP366 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium periodonticum SPP75 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Kingella sp._HMT_459_sp._HMT_932 SPP76 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella histicola_melaninogenica SPP77 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella melaninogenica_scopos_sp._HMT_314 SP37 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella histicola SPP80 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 SP381 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_231 SP389 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum_subsp._vincentii SP39 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Johnsonella sp._HMT_166 SP391 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Mogibacterium timidum SP392 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci SPP81 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema maltophilum_sp._HMT_260 SP400 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia lingnae_[Not_Validly_Published] SP401 Bacteria Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium durum SP402 Bacteria Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium matruchotii SPP82 Bacteria Synergistetes Synergistia Synergistales Synergistaceae Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 SP407 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_942 SP409 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Peptidiphaga sp._HMT_183 SPP84 Bacteria Firmicutes Clostridia Clostridiales_Eubacteriales Peptostreptococcaceae_Peptostreptococcaceae_[XI] Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081_stomatis SP418 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp._HMT_930 SP419 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Streptobacillus felis SP42 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Lachnospiraceae_[G-3] bacterium_HMT_100 SP420 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Mitsuokella sp._HMT_521 SP421 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_912 SPP86 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_912_sp._HMT_913 SP424 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_498 SP425 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_262 SP427 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Oribacterium sinus SP428 Bacteria Bacteroidetes Bacteroidetes_[C-1] Bacteroidetes_[O-1] Bacteroidetes_[F-1] Bacteroidetes_[G-5] bacterium_HMT_511 SP429 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_317 SP44 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia sp._HMT_172 SP455 Bacteria Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Solobacterium moorei SP456 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 SP457 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Kingella sp._HMT_012 SPP91 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Eikenella_Kingella halliae_sp._HMT_012 SPP92 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus dentirousetti_downei_sobrinus SP46 Bacteria Firmicutes Erysipelotrichi Erysipelotrichales Erysipelotrichaceae Erysipelotrichaceae_[G-1] bacterium_HMT_905 SP464 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_212 SPP94 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_212_sp._HMT_215_sp._HMT_217 SP468 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sputigena SP469 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga leadbetteri SP470 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_217 SPP96 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_215_sp._HMT_217 SPP97 Bacteria Firmicutes Bacilli Bacillales Gemellaceae Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 SP477 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Butyrivibrio sp._HMT_080 SP478 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas flueggei SP479 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia mucilaginosa SP48 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_304 SPP98 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) SP487 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy SP490 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema denticola SP491 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_305 SP492 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Veillonellaceae_[G-1] bacterium_HMT_155 SP493 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Anaeroglobus geminatus SP494 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_526 SP495 Bacteria Firmicutes Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma faucium SPP100 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Mogibacterium diversum_neglectum_pumilum_vescum SPP101 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae_Coriobacteriaceae Atopobium_Lancefieldella parvula_parvulum SP509 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Coriobacteriaceae Atopobium sp._HMT_416 SP51 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Eikenella corrodens SP511 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia hongkongensis SP513 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Eikenella halliae SPP103 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Eikenella_Neisseria canis_halliae SP517 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Lachnospiraceae_[G-2] bacterium_HMT_096 SP518 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia hofstadii SP519 Bacteria Firmicutes Clostridia Eubacteriales Peptostreptococcaceae Romboutsia timonensis SP520 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema amylovorum SP521 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_219 SPP106 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) SP534 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella saccharolytica SP535 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus sanguinis SP537 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella oris SP540 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Bergeyella sp._HMT_931 SP543 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella sp._HMT_396 SPP107 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) SP553 Bacteria Synergistetes Synergistia Synergistales Synergistaceae Fretibacterium sp._HMT_360 SP554 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia wadei SPP111 Bacteria Bacteroidetes_Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroidaceae_[G-1]_Phocaeicola abscessus_bacterium_HMT_272 SP567 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus anginosus SPP112 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus anginosus_constellatus SP568 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella nanceiensis SPP113 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella atypica_dispar SP570 Bacteria Firmicutes Clostridia Negativicutes Veillonellaceae Veillonella dispar SPP115 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia dentalis_mirabilis SP58 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia mirabilis SPP116 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Schaalia odontolytica_odontolyticus_sp._HMT_180 SP598 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcaceae_[G-2] bacterium_HMT_085 SP599 Bacteria Firmicutes Clostridia Eubacteriales Peptostreptococcaceae Clostridioides difficile SPP118 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) SPP119 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 SP606 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum SP607 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium sp._HMT_248 SP612 Bacteria Actinobacteria Coriobacteriia Eggerthellales Eggerthellaceae Cryptobacterium curtum SP613 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 SP614 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Stomatobaculum sp._HMT_097 SPP121 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema medium_sp._HMT_237 SP619 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Oribacterium asaccharolyticum SPP122 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Kocuria assamensis_palustris SP623 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Bergeyella sp._HMT_322 SP624 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Bergeyella sp._HMT_907 SPP123 Bacteria Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) SP663 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_847 SPP125 Bacteria Bacteroidetes_Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella_Prevotella dentalis_seregens SP682 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga gingivalis SPP129 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter aphrophilus_paraphrophilus SP687 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae_[XIV] Lachnoanaerobaculum saburreum SPP130 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 SP691 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella rava SP693 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcus stomatis SP695 Bacteria Proteobacteria Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium hominis SPP134 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia_Pseudoleptotrichia goodfellowii SP71 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_473 SPP135 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Tannerella sp._HMT_286_sp._HMT_808 SP716 Bacteria Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae Scardovia wiggsiae SP717 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Dialister pneumosintes SPP139 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter rectus_showae SP75 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_215 SPP145 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_513_sp._HMT_898 SP756 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp._HMT_332 SP76 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus mutans SPP147 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas endodontalis_sp._HMT_285 SP78 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_218 SPP153 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 SP785 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_308 SP794 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella nigrescens SP795 Bacteria Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bulleidia extructa SP798 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga granulosa SPP154 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca SPP155 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus salivarius_thermophilus_vestibularis SPP156 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae_Coriobacteriaceae Atopobium_Lancefieldella rimae SP804 Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus mucosae SP807 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella maculosa SP809 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_238 SP810 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Tannerella forsythia SP816 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus parainfluenzae SPP160 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum SP821 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus parahaemolyticus SP823 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Bergeyella sp._HMT_206 SP825 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella aurantiaca SP828 Bacteria Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia dentocariosa SP853 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_951 SP854 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 SP857 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum SP858 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces graevenitzii SP869 Eukaryota Streptophyta Magnoliopsida Poales Poaceae Triticum aestivum SP877 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae_[XI] Filifactor alocis SPP167 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Kingella_Neisseria denitrificans_elongata SP881 Bacteria Firmicutes Clostridia Eubacteriales Lachnospiraceae Lachnospiraceae_[G-2] bacterium_HMT_088 SP89 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema lecithinolyticum SP892 Bacteria Firmicutes Bacilli Lactobacillales Carnobacteriaceae Granulicatella elegans SP893 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp._HMT_221 SPP169 Bacteria Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae Bifidobacterium dentium_moukalabense SPP170 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella scopos_sp._HMT_314 SPP171 Bacteria Fusobacteria Fusobacteria Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum_subsp._animalis_simiae SP96 Bacteria Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema sp._HMT_246 SP98 Bacteria Firmicutes Negativicutes Selenomonadales Selenomonadaceae Centipeda periodontii SP99 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia trevisanii