taxon lfc: Patient_PI vs. Healthy_Control se: Patient_PI vs. Healthy_Control W: Patient_PI vs. Healthy_Control p: Patient_PI vs. Healthy_Control q: Patient_PI vs. Healthy_Control diff: Patient_PI vs. Healthy_Control Actinomyces timonensis (SP1) 0.084275943882355 0.531157823431216 0.158664600547428 0.873933129482432 1 FALSE Actinomyces johnsonii (SP100) 0.135435109185085 0.338555295412275 0.40003837193023 0.689128254523996 1 FALSE Lautropia mirabilis (SP101) -0.00800814145349184 0.343339186085653 -0.02332428623948 0.981391599363976 1 FALSE Methylobacterium rhodesianum (SP102) -0.0205208901858835 0.299350702818217 -0.0685513345807808 0.945346757062431 1 FALSE Streptococcus tigurinus (SP103) 0.429837182463713 0.29858494396363 1.43958090035535 0.149986006493896 1 FALSE Oribacterium sp._oral_taxon_078 (SP104) 0.318217907737867 0.225963467840834 1.4082714820168 0.159050696742197 1 FALSE Actinomyces sp._oral_taxon_175 (SP105) 0.298068819762348 0.321020077636763 0.928505226080019 0.353145558170097 1 FALSE Mogibacterium timidum (SP11) 1.27795953316663 0.856362543661856 1.49231133779159 0.135617545860945 1 FALSE Rothia aeria (SP111) 0.633453801229533 0.432687373431133 1.46399881329182 0.143194272592042 1 FALSE Lachnospiraceae_[G-7] sp._oral_taxon_086 (SP113) 0.149129618297331 0.19610277932982 0.760466622691326 0.446975713044161 1 FALSE Streptococcus australis (SP114) 0.470326192820766 0.420778032357726 1.11775367688614 0.263672210744678 1 FALSE Prevotella oris (SP116) -0.0528475025348731 0.205598323357793 -0.257042478128118 0.797145981616039 1 FALSE Neisseria pharyngis (SP119) 0.0569799989747709 0.268751466690384 0.212017443761209 0.83209342551949 1 FALSE Olsenella uli (SP12) 2.14400042770458 0.743879804095599 2.88218663270638 0.00394925740689828 0.608185640662334 FALSE Streptococcus infantis (SP120) 0.334251850602456 0.394327088199064 0.847651253503841 0.396632221469513 1 FALSE Slackia exigua (SP122) -0.408976365439737 0.283715868064131 -1.4414997942494 0.14944353541762 1 FALSE Fretibacterium sp._oral_taxon_360 (SP123) -0.0210815215858282 0.129680080906927 -0.1625656109897 0.870860465196332 1 FALSE Atopobium parvulum (SP124) 0.179123922251184 0.292327978455975 0.612749840768869 0.540041761501047 1 FALSE Actinomyces sp._oral_taxon_896 (SP125) -0.328571330485594 0.386998918420611 -0.849023898636545 0.395867994202401 1 FALSE Actinomyces sp._oral_taxon_171 (SP126) 0.155867976835165 0.324779999815102 0.479918643155061 0.63128524417154 1 FALSE Actinomyces israelii (SP13) 0.32225579411545 0.621114222787255 0.51883499410032 0.603875812580083 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_129 (SP130) -0.207897817977817 0.156973566410744 -1.32441291060319 0.185365949126633 1 FALSE Filifactor alocis (SP131) -0.0448007435346665 0.36186367619994 -0.123805583376412 0.90146921093478 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_148 (SP132) 0.019161034464681 0.126135267767294 0.151908620038221 0.87925900939492 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_145 (SP133) 0.0288554006263585 0.110098281461938 0.262087656984311 0.793253862569188 1 FALSE Bacteroidetes_[G-5] sp._oral_taxon_511 (SP134) 0.0821744145155851 0.130233319296706 0.630978423642646 0.528054632311123 1 FALSE Treponema sp._oral_taxon_237 (SP135) -0.203175254604255 0.162947214608897 -1.24687773946865 0.212442330130015 1 FALSE Gemella haemolysans (SP136) -0.258925161196049 0.301277562185395 -0.859423978731997 0.390106645090694 1 FALSE Veillonella parvula_group (SP139) 0.45498961229714 0.288868079136197 1.57507750132066 0.1152385565524 1 FALSE Actinomyces sp._oral_taxon_448 (SP14) -1.03937986387074 0.423967165187144 -2.45155745353994 0.0142239477208394 1 FALSE Streptococcus dentisani (SP140) -0.162148913079173 0.330326747964656 -0.490874305754137 0.623515351036207 1 FALSE Streptococcus constellatus (SP142) -0.0316314926458988 0.338544865311232 -0.0934336801026927 0.925559034685338 1 FALSE Olsenella sp._oral_taxon_807 (SP15) 1.30125655934948 0.660147861570494 1.97115924340615 0.0487056641004593 1 FALSE Selenomonas sp._oral_taxon_134 (SP150) -0.021657878834245 0.218338609063696 -0.0991939947182075 0.920984242864926 1 FALSE Streptococcus intermedius (SP156) -0.0642576467789544 0.129994235025833 -0.494311511323444 0.621086196681702 1 FALSE Neisseria flavescens|subflava (SP160) 0.141706294249631 0.359149061466251 0.394561226670355 0.693166733203917 1 FALSE Treponema maltophilum (SP165) 0.132111336727772 0.184307066244552 0.716800171689984 0.473497405773825 1 FALSE Treponema lecithinolyticum (SP166) -0.320003791213761 0.25310656537604 -1.26430458545527 0.206120724390203 1 FALSE Peptostreptococcaceae_[XI][G-3] sp._oral_taxon_495 (SP167) 0.357527318739911 0.336023195930584 1.06399594751122 0.287330535368759 1 FALSE Rothia mucilaginosa (SP17) 0.335099715387639 0.453342805082428 0.739175104646716 0.459800675891736 1 FALSE Treponema socranskii (SP171) 0.1918492524942 0.248941990055196 0.770658467266462 0.440909395841566 1 FALSE Agrobacterium tumefaciens (SP179) -0.0937892677984098 0.0818137778378704 -1.14637497835965 0.251640031272557 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP18) 0.0865207156652086 0.419046413514723 0.20647048363813 0.836423418649513 1 FALSE Selenomonas dianae (SP180) -0.307065323355316 0.117360865852787 -2.61642005726582 0.00888571689110609 1 FALSE Actinomyces massiliensis (SP182) -0.586496559132999 0.261943332473475 -2.23902075916512 0.025154565471473 1 FALSE Streptococcus sp._oral_taxon_058 (SP187) 0.444464444545554 0.381036940229049 1.16646024996521 0.243428410994905 1 FALSE Fusobacterium periodonticum (SP188) 0.137331154125211 0.243952786065041 0.562941527909406 0.57347470078938 1 FALSE Mogibacterium diversum (SP19) 0.253512580494732 0.384059965460015 0.660085932651383 0.509198685551729 1 FALSE Staphylococcus epidermidis (SP191) -0.117259594343357 0.270044892536231 -0.43422259625823 0.664126805849198 1 FALSE Aggregatibacter sp._oral_taxon_458 (SP195) -0.129117338945454 0.221731353017752 -0.582314305975108 0.560354991048166 1 FALSE Porphyromonas gingivalis (SP196) -0.0131152364376392 0.376092090388215 -0.0348724069791025 0.972181483266661 1 FALSE Bacteroides heparinolyticus (SP197) -0.012345655560771 0.0908545082997641 -0.135883796982731 0.891913144793326 1 FALSE Tannerella forsythia (SP2) -0.0980660983314471 0.582638254720693 -0.16831386805945 0.866336364369436 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_132 (SP20) -0.0595594439072037 0.294702456567317 -0.202100262756374 0.839838342454068 1 FALSE Streptococcus sp._oral_taxon_070 (SP201) 0.0521580106774619 0.349193173785954 0.149367211597995 0.881263882811484 1 FALSE Corynebacterium durum (SP202) -0.23378029771791 0.124595108871786 -1.87632002439583 0.06061134900656 1 FALSE Actinomyces sp._oral_taxon_170 (SP21) -0.32793072406405 0.63399232135804 -0.517247154289831 0.604983638845594 1 FALSE Prevotella intermedia (SP210) 0.00435555968396377 0.165473336352669 0.0263218218715363 0.979000649603555 1 FALSE Bacteroidetes_[G-3] sp._oral_taxon_365 (SP211) -0.0586578203669404 0.114319015364185 -0.513106416986491 0.60787688302773 1 FALSE Brochothrix thermosphacta (SP214) -0.389991550996243 0.155272150847996 -2.51166451206067 0.0120163263312148 1 FALSE Actinomyces odontolyticus (SP22) 0.35701674849041 0.529544458291511 0.67419598656979 0.500186720891879 1 FALSE Abiotrophia defectiva (SP23) 0.333893143671656 0.523678411015826 0.637591958438719 0.523739331727996 1 FALSE Bifidobacterium dentium (SP235) 0.132111336727772 0.155077683055638 0.851904246469647 0.394267239760041 1 FALSE Actinomyces gerencseriae (SP24) -0.534858201454224 0.431664060865936 -1.23906122826458 0.215322824060889 1 FALSE Actinomyces sp._oral_taxon_877 (SP244) -0.316125556867346 0.16954024969014 -1.86460476167229 0.0622368249351683 1 FALSE Lachnospiraceae_[G-8] sp._oral_taxon_500 (SP246) -0.0656646694499975 0.127830455778354 -0.513685639702748 0.60747179355766 1 FALSE Peptostreptococcaceae_[XI][G-1] sp._oral_taxon_383 (SP248) -0.265996713125256 0.245368895367901 -1.08406859282806 0.278334387017068 1 FALSE Cardiobacterium hominis (SP249) 0.0576745735731902 0.134705127091116 0.42815425677286 0.668538817205906 1 FALSE Atopobium sp._oral_taxon_199 (SP25) 1.20146876739665 0.509255983469079 2.35926293729959 0.0183112762355867 1 FALSE Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_369 (SP255) 0.0677570203205192 0.254674121566362 0.266053809879789 0.790197767614403 1 FALSE Actinomyces sp._oral_taxon_172 (SP256) 0.212274454557834 0.160092382503421 1.32594975000324 0.184856342457322 1 FALSE Fusobacterium sp._HOT_204 (SP257) -0.0206329990514053 0.135887745168015 -0.151838556345859 0.879314271122016 1 FALSE Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_103 (SP258) 0.110299012863997 0.109037648880088 1.0115681509723 0.311744580432735 1 FALSE Streptococcus mitis (SP26) 0.293315931683967 0.476690154984188 0.615317787911303 0.538344872600322 1 FALSE Mycoplasma faucium (SP264) -0.243474663879588 0.102155864037502 -2.38336453979976 0.0171551968430858 1 FALSE Actinomyces sp._oral_taxon_178 (SP265) -0.22701950069885 0.165137993852477 -1.37472604215874 0.16921639435176 1 FALSE Actinomyces sp._oral_taxon_897 (SP27) 0.668559244354046 0.509537047313683 1.31209153069191 0.189489253248612 1 FALSE Noviherbaspirillum suwonense (SP274) -0.413069218484121 0.143809566955783 -2.87233476345232 0.00407451094759557 0.623400174982122 FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_minutum (SP277) 0.0185929881297278 0.23842958727181 0.0779810439739249 0.937843131786146 1 FALSE Streptococcus gordonii (SP28) 0.173032643712275 0.448870054950342 0.385484934457073 0.699878166257485 1 FALSE Streptococcus sanguinis (SP29) 0.506106629756225 0.455215277856672 1.11179622999291 0.266225773195008 1 FALSE Actinomyces sp._oral_taxon_525 (SP3) 1.53383239944241 0.761423556036761 2.01442730170585 0.0439646903467196 1 FALSE Dialister invisus (SP30) -0.11528452533736 0.127876646360567 -0.901529158125551 0.367307037883904 1 FALSE TM7_[G-5] sp._oral_taxon_356 (SP32) 0.906026426152131 0.552617902296278 1.63951696531608 0.10110564036505 1 FALSE Pseudoramibacter alactolyticus (SP323) 0.0738870710249508 0.151052916295735 0.489146934974053 0.624737674860558 1 FALSE Acidovorax defluvii (SP324) -0.0307758877475058 0.10635185198973 -0.289378014314953 0.772292117663456 1 FALSE Streptococcus oralis (SP33) -0.0243709563520862 0.250735518293317 -0.09719786218551 0.922569265737044 1 FALSE Selenomonas noxia (SP333) 0.0261678835477382 0.155892513739866 0.167858500193306 0.866694598849994 1 FALSE Treponema denticola (SP34) 0.360469542220784 0.248204073503994 1.4523111451472 0.146415109924572 1 FALSE Clostridiales_[G] sp._Oral_Taxon_G74 (SP35) 0.359586151623923 0.405377873771706 0.887039414061433 0.375057680797776 1 FALSE Tetragenococcus halophilus (SP36) -0.282005750359119 0.290209489542104 -0.971731664612592 0.331184059668699 1 FALSE Paracoccus marcusii_Oral_Taxon_D41 (SP365) -0.200427295576863 0.104996719162841 -1.90889103178564 0.0562761501831154 1 FALSE Alloprevotella tannerae (SP37) -0.0307758877475057 0.125208874466704 -0.245796377282265 0.805839861560621 1 FALSE Enterobacter sp._str._638 (SP376) -0.217592184139494 0.134582723363082 -1.61679135851982 0.105923325378676 1 FALSE Peptoniphilaceae_[G-1] sp._oral_taxon_113 (SP38) 0.367336698296763 0.703488917462883 0.522164158067415 0.601556038926405 1 FALSE Actinomyces sp._oral_taxon_180 (SP39) 0.600155203232001 0.577633017691276 1.03899047466286 0.298809166305719 1 FALSE Atopobium rimae (SP4) 0.840165380022366 0.585996136002781 1.43373877130545 0.151646823597344 1 FALSE Rhizobium rhizogenes_Oral_Taxon_D34 (SP40) 0.0737366261967591 0.425573710353589 0.173264053682956 0.862443877322115 1 FALSE Actinomyces oricola (SP41) 0.869008601441325 0.718733335106173 1.20908347921966 0.226630775557273 1 FALSE Propionibacterium sp._oral_taxon_194 (SP42) 0.118712884618098 0.219366588307572 0.541162104648549 0.588395854817396 1 FALSE Prevotella dentalis (SP422) -0.147108281687636 0.0960005121333524 -1.5323697594789 0.125431215488098 1 FALSE TM7_[G-1] sp._oral_taxon_952 (SP44) 0.210295152854017 0.324370207636251 0.648318334740047 0.516779077797433 1 FALSE Streptococcus sp._oral_taxon_423 (SP45) 0.261129625440658 0.53997052473971 0.483599777166604 0.6286699329471 1 FALSE TM7_[G-1] sp._oral_taxon_346 (SP46) 0.778239756149264 0.789612497628744 0.985597059933027 0.324330881349047 1 FALSE Actinomyces naeslundii (SP5) -0.511346804533831 0.527699730890906 -0.969010925342965 0.332539738129333 1 FALSE Selenomonas sputigena (SP51) -0.0236531945304616 0.33313646410077 -0.0710015176342475 0.943396547643608 1 FALSE Actinomyces cardiffensis (SP52) 0.666516639382413 0.493205894986297 1.35139633600878 0.176568506880559 1 FALSE Actinomyces dentalis (SP54) 0.698999763361918 0.624798488039551 1.11876033111922 0.263242399234222 1 FALSE Rothia dentocariosa (SP55) 0.248090403935077 0.576815967640019 0.430103218102842 0.667120559201656 1 FALSE Actinomyces sp._oral_taxon_169 (SP56) -0.705955011793767 0.550162452052182 -1.28317555871081 0.199430576823065 1 FALSE Peptostreptococcus stomatis (SP57) 0.956231279705293 0.462640448067208 2.06689943281047 0.0387436312070362 1 FALSE Brevundimonas diminuta (SP6) -1.40297012197662 0.528264029106843 -2.65581232996059 0.00791176306973007 1 FALSE Propionibacterium propionicum (SP60) 0.987618032574986 0.627066737727031 1.57498073674721 0.115260891022639 1 FALSE Anaerolineae_[G-1] sp._oral_taxon_439 (SP61) 0.177006248935429 0.51988772080973 0.340470147399788 0.7335025003023 1 FALSE TM7_[G-1] sp._oral_taxon_349 (SP62) 1.09419749828217 0.636479108770388 1.71914126199059 0.0855886531064544 1 FALSE Haemophilus parainfluenzae (SP64) 0.0616591736614141 0.383276913567596 0.160873695959096 0.872192880015776 1 FALSE Solobacterium moorei (SP65) 0.713018654551412 0.383726440801282 1.85814314244939 0.0631486896677512 1 FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP66) 0.448585259653336 0.345563669222255 1.29812621987418 0.194243965743408 1 FALSE Actinomyces georgiae (SP68) -0.0942483065016984 0.34062484228579 -0.276692404080799 0.782016304917313 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP69) 0.268152410039151 0.434248775562084 0.617508730317223 0.536899224629249 1 FALSE Actinomyces sp._oral_taxon_414 (SP7) 0.420059392481125 0.32354723108941 1.29829388762423 0.194186365988116 1 FALSE Bacteroidales_[G-2] sp._oral_taxon_274 (SP70) 0.00370105534880346 0.637802571744071 0.00580282286834142 0.99537004320819 1 FALSE Desulfobulbus sp._oral_taxon_041 (SP71) 0.0948972799639614 0.372502180343043 0.254756307403541 0.798911323616328 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_150 (SP72) 0.117395269305677 0.218613115977548 0.537000119049281 0.591267531820287 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP75) 0.222256214064535 0.630350804049637 0.352591307311212 0.724394855340326 1 FALSE Fretibacterium fastidiosum (SP76) -0.179286480158743 0.324708202751985 -0.552146446068329 0.580848022397578 1 FALSE Actinomyces viscosus (SP78) -0.0341579794245455 0.110134242604126 -0.310148584281143 0.756447967639407 1 FALSE Streptococcus sp._oral_taxon_064 (SP79) -0.21907045997073 0.390798039653374 -0.560572054468437 0.575089306677349 1 FALSE Parvimonas micra (SP8) 1.10849540994336 0.818232980865258 1.35474300824583 0.175499450089214 1 FALSE Desemzia incerta (SP82) -0.200110229252039 0.126342750409031 -1.58386791964072 0.113223779109196 1 FALSE Olsenella profusa (SP83) 0.161683498825097 0.252944152468219 0.639206311936431 0.522688726484338 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_155 (SP85) 0.0603620906518106 0.199369796755218 0.302764469012936 0.762069362871848 1 FALSE Propionibacterium acnes (SP86) -0.20053580027036 0.610366742529809 -0.328549683816639 0.742496084888621 1 FALSE Parvimonas sp._oral_taxon_110 (SP88) -0.0886462782019705 0.347016124720351 -0.255452908055519 0.798373311144417 1 FALSE Streptococcus anginosus (SP9) 0.406838286926939 0.434391250340217 0.936571090251707 0.348979228628196 1 FALSE Streptococcus parasanguinis_II (SP90) 0.360110152188397 0.325660317619482 1.10578456356223 0.268819777919627 1 FALSE Carnobacterium divergens (SP91) -0.300404132198567 0.655749467399782 -0.458108084158648 0.646874791227827 1 FALSE Gemella morbillorum (SP92) 0.334980274462418 0.313428821750825 1.06876027734528 0.285177702643577 1 FALSE Porphyromonas endodontalis (SP94) 0.480294658262175 0.578168748975838 0.830717085821334 0.406133471910113 1 FALSE Actinobaculum sp._oral_taxon_183 (SP95) 0.0619162057120446 0.432441616200201 0.143178184967702 0.886149458173631 1 FALSE Fusobacterium nucleatum_subsp._polymorphum (SP96) -0.109906385648658 0.337838545573151 -0.325322220003639 0.744937215587118 1 FALSE Granulicatella adiacens (SP97) 0.834100800101488 0.539654284806545 1.54562063822118 0.122196213900621 1 FALSE Actinomyces oris (SP99) 0.286618911137077 0.448608949181981 0.638905914961603 0.522884139849533 1 FALSE Actinomyces oricola_nov_97.421% (SPN145) -0.1085237283183 0.194926600999333 -0.556741500451603 0.577704057941001 1 FALSE Actinomyces sp._oral_taxon_171_nov_96.450% (SPN155) -0.012345655560771 0.119888868516024 -0.102975828478363 0.91798215503004 1 FALSE Slackia exigua_nov_89.339% (SPN156) -0.150173307039852 0.12280320067589 -1.22287779319531 0.221375857217914 1 FALSE Hymenobacter roseosalivarius_nov_91.176% (SPN160) -0.200427295576863 0.104996719162841 -1.90889103178563 0.0562761501831155 1 FALSE Actinomyces israelii_nov_94.922% (SPN161) -0.180590040719085 0.123475671464734 -1.46255564822471 0.143589006766863 1 FALSE Actinomyces sp._oral_taxon_170_nov_97.843% (SPN166) -0.0656646694499976 0.102455073251894 -0.640911839363538 0.521579963273153 1 FALSE Actinomyces timonensis_nov_93.927% (SPN30) 0.205267605474776 0.256959460865367 0.798832643808846 0.42438745938158 1 FALSE Acinetobacter sp._oral_taxon_408_nov_92.480% (SPN67) -0.297053890868814 0.0952617585863903 -3.1182910674426 0.00181903062362966 0.281949746662597 FALSE Actinomyces israelii_nov_96.857% (SPN82) 0.20329253646878 0.315188125609019 0.644987929275476 0.518935008044536 1 FALSE Actinomyces dentalis_nov_97.804% (SPN93) 0.246917184196329 0.215164013793318 1.14757658515105 0.251143400480289 1 FALSE Streptococcus salivarius_vestibularis (SPP1) -0.224454927069299 0.223232353169453 -1.00547668777616 0.314667369304634 1 FALSE Fusobacterium naviforme_nucleatum_subsp._vincentii (SPP9) -0.119447356657121 0.213493616791009 -0.559489124089592 0.575827951689305 1 FALSE