Taxon HAKU.02057.04 HAKU.04092.05 HAKU.06449.04 HAKU.06601.03 HAKU.07991.04 HAKU.12368.03 HAKU.14131.03 HAKU.14257.05 HAKU.14257.06 HAKU.15133.03 HAKU.15133.05 HAKU.17022.02 HAKU.17043.03 HAKU.17282.03 HAKU.19356.04 HAKU.22968.06 HAKU.23313.04 HAKU.24962.03 Leptotrichia sp._HMT_392 (SP1) 42 2 5 23 12 41 6 0 1 28 63 12 6 1 6 1 9 76 Prevotella veroralis (SP100) 50 13 68 68 2 25 17 63 10 36 57 22 0 21 4 103 105 0 Shuttleworthia satelles (SP101) 1 11 33 1 0 0 0 28 2 9 15 9 1 0 0 87 18 0 Prevotella micans (SP120) 47 13 0 1 0 3 0 0 1 10 20 0 5 14 1 8 18 6 Lachnoanaerobaculum orale (SP121) 110 256 18 32 119 44 32 1 6 32 104 35 40 39 28 125 87 9 Neisseria oralis (SP122) 290 117 1635 141 91 121 155 140 1613 632 173 107 94 433 183 495 155 1776 Prevotella fusca (SP127) 5 2 0 8 84 0 0 5 1 9 6 7 3 0 0 9 0 0 Megasphaera micronuciformis (SP137) 86 601 4 6 314 3 78 12 1 24 8 22 17 109 24 6 25 0 Selenomonas dianae (SP138) 6 2 0 0 0 0 0 0 11 0 11 1 2 0 5 0 0 5 Desulfobulbus sp._HMT_041 (SP139) 0 0 0 0 0 0 0 0 3 0 0 4 2 0 0 0 0 0 Prevotella salivae (SP15) 204 309 0 57 375 7 185 49 67 19 121 66 12 370 75 66 195 17 Veillonella sp._HMT_780 (SP152) 115 253 576 0 381 252 242 54 75 64 86 127 693 9 106 12 1333 365 Treponema sp._HMT_256 (SP153) 0 1 3 0 0 0 0 2 0 0 2 7 4 0 0 1 0 0 Catonella morbi (SP155) 17 32 4 0 4 7 7 0 0 3 3 5 3 27 3 0 0 6 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP156) 134 1 38 56 8 68 25 5 15 7 12 28 24 4 1 26 17 31 Bacteroidetes_[G-3] bacterium_HMT_280 (SP159) 0 3 7 0 0 0 0 0 0 3 5 7 0 0 0 0 0 0 Aggregatibacter actinomycetemcomitans (SP16) 9 245 747 0 23 0 0 45 95 85 143 31 9 0 0 0 0 0 Leptotrichia buccalis (SP160) 96 0 0 12 22 29 33 8 9 24 38 32 28 2 11 8 37 116 Tannerella serpentiformis (SP161) 9 0 0 13 1 0 5 0 5 14 19 1 4 3 1 4 3 6 Bacteroidetes_[G-5] bacterium_HMT_505 (SP169) 0 30 12 0 8 0 0 13 7 15 11 62 17 1 0 90 0 0 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP17) 9 0 6 1 0 13 0 0 0 0 8 1 2 0 0 1 0 1 Alloprevotella sp._HMT_914 (SP174) 4 5 24 0 2 0 3 17 1 6 1 12 36 2 2 0 1 8 Prevotella sp._HMT_309 (SP175) 6 88 10 0 41 0 36 0 4 0 1 4 3 39 26 4 1 0 Selenomonas noxia (SP176) 5 9 10 27 14 38 17 27 57 8 39 1 1 5 1 80 9 67 Pseudoramibacter alactolyticus (SP19) 0 0 0 0 0 0 0 5 0 0 0 3 0 0 1 24 0 0 Veillonella sp._HMT_917 (SP203) 0 134 0 0 99 3 4 5 6 1 1 1 36 264 85 3 12 0 Peptidiphaga gingivicola (SP204) 8 42 26 55 1 3 0 289 9 16 4 2 3 0 28 1 82 5 Prevotella oulorum (SP206) 169 24 19 64 12 28 23 38 62 20 34 6 7 135 38 89 46 9 Lachnospiraceae_[G-8] bacterium_HMT_500 (SP208) 0 5 0 1 0 0 0 0 0 5 4 24 1 0 0 8 0 0 Abiotrophia defectiva (SP216) 357 9 212 227 132 242 9 0 29 478 274 338 22 2 29 5 95 227 Prevotella pleuritidis (SP217) 1 93 31 0 0 10 8 0 13 82 23 9 8 4 1 69 11 1 Prevotella koreensis (SP220) 0 4 0 0 0 0 0 0 0 2 0 10 5 0 0 0 0 0 Prevotella sp._HMT_300 (SP23) 20 15 0 0 0 2 16 18 7 2 0 1 11 0 0 40 0 5 Butyrivibrio sp._HMT_455 (SP243) 0 14 0 0 7 0 5 0 0 0 0 0 0 0 5 0 1 0 Porphyromonas gingivalis (SP248) 0 0 0 0 6 0 0 0 0 8 0 384 7 0 0 0 3 0 Dialister invisus (SP253) 171 16 83 9 1 2 29 9 7 30 15 12 8 0 3 1586 23 3 Leptotrichia sp._HMT_225 (SP254) 254 1 66 0 20 0 13 0 9 8 12 59 31 0 2 0 15 163 Prevotella multisaccharivorax (SP255) 0 0 0 0 0 0 0 2 5 0 18 0 0 0 0 2742 0 0 Fretibacterium fastidiosum (SP256) 0 2 9 0 0 0 0 0 0 1 3 2 1 0 0 5 5 0 Prevotella baroniae (SP257) 0 27 0 0 0 0 0 3 4 4 16 23 0 0 8 0 0 0 Stomatobaculum longum (SP266) 60 410 7 42 248 17 55 7 1 21 176 7 48 23 19 128 86 2 Prevotella pallens (SP267) 67 223 19 35 250 8 70 0 5 8 54 108 25 152 42 0 117 16 Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP269) 0 6 0 0 2 0 0 0 0 40 45 34 0 0 0 0 4 0 Prevotella sp._HMT_472 (SP278) 16 0 3 55 0 17 1 1 4 0 0 24 1 5 0 0 0 0 Parvimonas micra (SP282) 1 37 36 0 21 6 20 6 2 28 75 6 0 1 0 71 50 5 Campylobacter gracilis (SP283) 94 25 35 98 4 8 12 12 29 16 35 5 11 43 14 53 59 28 Bacteroidetes_[G-5] bacterium_HMT_507 (SP285) 0 8 0 0 0 0 0 1 0 1 64 6 8 0 0 0 0 0 Leptotrichia sp._HMT_417 (SP286) 4124 185 102 46 558 70 529 225 36 64 360 102 870 49 122 37 1646 207 Prevotella multiformis (SP291) 0 186 0 0 0 0 0 0 5 5 70 92 13 0 8 1 0 0 Leptotrichia shahii (SP292) 1156 59 68 112 23 124 20 50 92 26 301 29 169 49 74 74 244 832 Fusobacterium nucleatum (SP293) 360 88 14 43 21 133 69 7 36 163 219 156 97 59 64 208 31 99 Campylobacter concisus (SP294) 128 145 8 31 45 109 76 5 64 15 106 32 26 201 44 18 32 52 Leptotrichia sp._HMT_909 (SP295) 6 0 21 0 2 0 0 0 0 1 3 3 20 0 0 0 3 7 Pseudostreptobacillus hongkongensis (SP297) 1 0 25 0 54 0 0 4 7 0 0 0 1 4 0 0 0 0 Cardiobacterium valvarum (SP298) 8 16 58 2 12 0 1 0 16 17 8 0 1 13 1 9 4 67 Prevotella denticola (SP300) 40 3 0 11 0 0 14 44 10 0 53 34 33 0 6 5443 21 11 Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 (SP301) 0 2 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 1 Streptococcus hongkongensis (SP304) 16 18 0 2 17 0 1 8 3 13 5 28 11 5 99 1 6 45 Prevotella intermedia (SP307) 0 28 22 0 47 0 0 20 28 2 12 38 15 0 0 0 3 0 Granulicatella adiacens (SP310) 352 1065 221 163 972 854 52 19 77 672 716 921 283 164 211 41 282 483 Ottowia sp._HMT_894 (SP313) 0 0 27 0 0 0 0 0 0 1 4 0 0 0 4 0 0 0 Oribacterium sp._HMT_078 (SP323) 6 11 5 5 0 4 1 12 1 13 12 1 1 6 0 92 14 0 Atopobium sp._HMT_199 (SP328) 0 0 5 0 0 0 0 20 1 16 23 19 2 0 0 71 17 0 Rothia aeria (SP329) 18 27 42 525 71 35 3 20 56 50 94 29 110 63 48 27 432 78 Bacteroidales_[G-2] bacterium_HMT_274 (SP330) 292 52 64 9 3 0 0 4 7 3 32 9 17 45 0 0 18 7 Kingella oralis (SP332) 59 75 32 34 10 30 12 262 114 6 249 6 23 56 72 18 22 74 Treponema sp._HMT_257 (SP333) 0 146 0 25 0 13 0 12 1 26 6 74 3 0 0 0 6 3 Oribacterium parvum (SP338) 1 4 4 0 9 0 23 0 0 6 0 5 2 2 0 0 0 6 Neisseria sp._HMT_018 (SP342) 0 0 0 0 0 3 0 0 26 11 4 0 0 0 2 23 0 1 Prevotella sp._HMT_443 (SP343) 1 0 0 0 5 0 0 0 0 17 19 9 6 0 0 0 0 0 Prevotella shahii (SP344) 14 0 8 0 2 0 0 0 2 4 2 10 6 0 0 2 0 5 Streptococcus intermedius (SP345) 12 18 11 21 6 18 10 15 2 50 59 4 20 0 64 8 51 9 Prevotella sp._HMT_313 (SP346) 274 292 13 4 11 0 230 0 13 39 25 177 94 51 339 9 73 15 Alloprevotella tannerae (SP347) 20 43 97 13 18 13 59 80 13 23 27 12 62 0 5 1819 37 39 Treponema socranskii (SP355) 27 11 10 9 1 0 3 15 2 6 5 5 13 14 7 225 2 4 Campylobacter sp._HMT_044 (SP357) 5 2 18 0 96 0 5 7 0 4 127 0 5 0 0 0 0 2 Prevotella melaninogenica (SP36) 171 2047 81 34 296 171 431 5 33 140 59 481 453 981 382 8 121 256 Pinus sylvestris (SP365) 0 1244 6 3106 6 0 7027 25435 8 372 0 2 0 11 3 49 18 1 Fusobacterium periodonticum (SP366) 336 1545 181 52 23 240 387 0 5 643 94 1082 652 311 255 10 27 596 Prevotella histicola (SP37) 249 2989 26 30 678 17 686 9 20 24 20 259 199 1259 777 88 115 24 Treponema sp._HMT_231 (SP381) 15 4 0 10 0 0 0 2 0 7 2 0 1 1 0 107 0 0 Fusobacterium nucleatum_subsp._vincentii (SP389) 12 179 450 0 22 27 73 25 55 168 298 240 65 2 22 74 171 7 Johnsonella sp._HMT_166 (SP39) 0 3 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 Mogibacterium timidum (SP391) 0 1 7 0 0 0 0 2 0 9 0 2 0 0 0 0 2 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP392) 3 16 1 0 40 0 1 0 0 9 0 30 5 7 4 1 0 5 Schaalia lingnae_[Not_Validly_Published] (SP400) 2 39 0 0 147 0 1 0 0 12 4 18 10 10 17 0 0 2 Corynebacterium durum (SP401) 17 43 7 127 27 186 5 8 28 9 234 17 19 12 10 14 71 10 Corynebacterium matruchotii (SP402) 1198 61 39 115 31 41 4 128 132 243 3452 58 38 1 81 15 284 129 Prevotella sp._HMT_942 (SP407) 14 37 48 1 14 0 206 0 3 1 0 2 108 4 0 0 24 41 Peptidiphaga sp._HMT_183 (SP409) 8 27 2 130 1 0 1 20 1 15 23 5 0 0 119 0 7 0 Porphyromonas sp._HMT_930 (SP418) 39 57 698 3 508 286 1261 8 1026 168 81 32 889 246 322 0 279 416 Streptobacillus felis (SP419) 0 0 40 0 0 0 0 0 0 0 0 257 1 0 0 0 0 0 Lachnospiraceae_[G-3] bacterium_HMT_100 (SP42) 54 2 6 1 9 3 2 0 0 18 27 2 6 0 5 1 0 20 Mitsuokella sp._HMT_521 (SP420) 82 47 0 12 1 11 12 13 5 0 0 2 3 0 0 7 3 0 Alloprevotella sp._HMT_912 (SP421) 35 4 6 78 8 12 0 0 7 4 17 4 3 0 1 35 0 3 Leptotrichia sp._HMT_498 (SP424) 3084 41 19 70 3 84 68 51 56 35 93 16 79 3 25 22 228 465 Treponema sp._HMT_262 (SP425) 1 3 9 0 0 7 0 0 0 9 2 117 1 0 0 0 61 1 Oribacterium sinus (SP427) 50 400 38 20 12 51 61 0 3 45 45 13 8 35 17 3 23 113 Bacteroidetes_[G-5] bacterium_HMT_511 (SP428) 0 53 0 0 3 13 0 4 4 0 0 1 4 16 12 0 0 0 Prevotella sp._HMT_317 (SP429) 88 6 14 55 10 13 35 1 53 10 43 22 15 16 10 11 21 53 Schaalia sp._HMT_172 (SP44) 53 400 15 0 303 0 14 0 0 47 30 106 76 21 30 0 14 17 Solobacterium moorei (SP455) 23 63 19 0 78 3 13 0 0 11 12 32 13 12 3 137 25 7 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP456) 7 0 32 1 67 19 0 0 3 6 12 5 0 10 4 0 2 13 Kingella sp._HMT_012 (SP457) 2 31 0 29 21 41 3 12 70 84 102 0 12 83 23 8 52 4 Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP46) 0 1 8 0 0 0 0 2 0 0 1 0 0 0 0 123 3 0 Leptotrichia sp._HMT_212 (SP464) 44 2 26 4 23 131 24 0 5 39 49 41 8 59 6 3 9 181 Capnocytophaga sputigena (SP468) 35 26 35 127 17 146 26 5 46 35 140 16 9 108 45 1 11 72 Capnocytophaga leadbetteri (SP469) 55 5 79 54 8 23 3 1 25 16 103 4 9 73 21 7 13 35 Leptotrichia sp._HMT_217 (SP470) 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 0 4 Butyrivibrio sp._HMT_080 (SP477) 0 0 12 0 41 0 0 0 0 4 11 0 6 0 0 4 0 0 Selenomonas flueggei (SP478) 22 0 0 5 0 4 6 1 1 0 11 0 1 0 0 1 0 0 Rothia mucilaginosa (SP479) 603 1255 1165 539 912 551 43 79 536 1336 567 1534 2878 343 4771 39 328 1852 Prevotella sp._HMT_304 (SP48) 0 0 0 0 0 0 0 5 4 0 0 66 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP487) 10 25 56 2 1 1 1 0 2 36 81 12 2 0 3 0 54 0 Treponema denticola (SP490) 0 10 6 0 15 0 0 5 6 12 9 27 3 0 0 92 3 0 Prevotella sp._HMT_305 (SP491) 0 95 0 0 31 0 17 0 0 0 0 0 1 26 10 0 0 0 Veillonellaceae_[G-1] bacterium_HMT_155 (SP492) 28 1 0 1 0 0 0 0 1 0 0 0 1 0 0 26 1 0 Anaeroglobus geminatus (SP493) 13 0 0 9 0 0 1 15 0 0 0 1 59 0 1 2934 0 2 Prevotella sp._HMT_526 (SP494) 0 0 0 0 1 0 0 0 0 1 13 2 0 0 0 0 0 0 Mycoplasma faucium (SP495) 0 44 7 0 10 0 0 12 2 4 14 36 2 0 0 0 6 0 Eikenella corrodens (SP51) 19 7 20 3 2 7 5 4 6 30 33 2 2 6 3 5 10 16 Leptotrichia hongkongensis (SP511) 51 106 10 303 28 415 91 144 44 95 580 38 59 46 145 376 277 53 Eikenella halliae (SP513) 5 7 23 85 17 22 4 8 59 83 207 10 11 22 37 3 35 48 Lachnospiraceae_[G-2] bacterium_HMT_096 (SP517) 438 442 42 37 249 0 49 74 6 11 21 28 51 32 49 0 190 92 Leptotrichia hofstadii (SP518) 68 12 25 30 1 147 24 12 27 29 60 28 21 1 10 49 68 154 Romboutsia timonensis (SP519) 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Treponema amylovorum (SP520) 0 2 0 0 12 0 3 22 12 0 34 8 0 0 0 303 73 0 Leptotrichia sp._HMT_219 (SP521) 0 0 3 0 2 7 4 0 7 12 22 0 0 29 9 1 2 7 Prevotella saccharolytica (SP534) 47 1 0 14 1 0 2 1 4 4 5 2 3 7 2 3 5 11 Streptococcus sanguinis (SP535) 1606 92 3156 1028 281 954 47 180 583 1394 709 357 73 6 308 155 780 1087 Prevotella oris (SP537) 57 80 58 92 11 12 36 18 58 37 63 35 43 32 60 1557 103 43 Bergeyella sp._HMT_931 (SP540) 1 4 11 0 29 14 25 0 1 0 3 0 2 4 1 0 12 0 Prevotella sp._HMT_396 (SP543) 5 0 0 0 0 1 15 0 0 2 0 9 1 38 1 0 0 2 Fretibacterium sp._HMT_360 (SP553) 0 2 5 0 0 0 0 0 0 0 9 5 0 0 0 0 3 0 Leptotrichia wadei (SP554) 669 13 12 96 3 50 32 172 8 41 217 15 22 10 17 69 146 37 Streptococcus anginosus (SP567) 0 9 0 0 14 0 0 7 2 42 188 65 0 0 3 17 192 0 Prevotella nanceiensis (SP568) 17 139 27 26 31 35 60 0 3 15 3 97 15 47 119 0 17 36 Veillonella dispar (SP570) 861 111 156 155 34 668 95 121 170 63 204 154 165 112 571 105 198 55 Lautropia mirabilis (SP58) 500 1309 331 2090 69 1168 67 391 4149 413 267 146 56 698 39 140 148 602 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP598) 10 355 12 1 156 0 17 9 3 7 4 9 13 0 2 11 29 5 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP606) 0 1 0 0 0 0 0 0 0 11 0 51 1 0 0 0 0 0 Fusobacterium sp._HMT_248 (SP607) 11 34 0 0 38 5 3 0 11 0 5 89 17 2 0 0 25 84 Cryptobacterium curtum (SP612) 3 0 2 0 0 0 0 6 0 1 0 0 0 0 0 211 5 0 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP613) 0 0 8 0 0 0 1 0 0 0 0 9 0 0 0 0 0 3 Stomatobaculum sp._HMT_097 (SP614) 14 0 2 1 3 0 105 0 0 33 0 92 1 0 3 0 6 39 Oribacterium asaccharolyticum (SP619) 17 70 10 0 55 3 25 15 0 6 13 8 8 4 2 0 39 9 Bergeyella sp._HMT_322 (SP623) 11 11 10 12 10 134 31 2 9 12 46 32 19 145 5 0 9 103 Bergeyella sp._HMT_907 (SP624) 6 4 10 1 2 12 0 1 5 7 23 1 0 9 0 0 4 9 Leptotrichia sp._HMT_847 (SP663) 9 28 48 11 0 0 8 71 16 9 5 17 2 2 17 159 46 0 Capnocytophaga gingivalis (SP682) 17 17 33 29 17 39 1 7 8 20 41 4 10 49 13 0 3 8 Lachnoanaerobaculum saburreum (SP687) 50 5 0 15 6 45 4 5 7 62 125 3 0 0 8 8 23 26 Alloprevotella rava (SP691) 1 167 39 11 319 0 103 0 3 11 3 28 10 1 47 384 17 6 Peptostreptococcus stomatis (SP693) 35 3 19 0 56 2 0 2 0 41 78 71 10 11 3 0 10 5 Cardiobacterium hominis (SP695) 7 8 23 59 7 50 1 2 30 31 76 4 1 23 32 1 11 58 Alloprevotella sp._HMT_473 (SP71) 34 934 291 0 900 221 977 47 60 8 273 79 1448 6 2 3 1088 822 Scardovia wiggsiae (SP716) 26 2 11 4 0 0 0 62 3 0 0 9 0 6 4 9 17 2 Dialister pneumosintes (SP717) 0 25 24 0 19 0 0 3 0 7 64 7 3 0 0 536 12 3 Leptotrichia sp._HMT_215 (SP75) 173 208 5 13 9 8 76 0 1 142 317 197 229 27 27 0 10 127 Capnocytophaga sp._HMT_332 (SP756) 1 1 8 12 3 27 3 2 9 3 22 1 3 7 3 0 2 24 Streptococcus mutans (SP76) 9 3 0 11 1 0 2 158 8 5 41 2 0 0 872 10 28 0 Leptotrichia sp._HMT_218 (SP78) 4857 298 120 19 169 0 172 95 7 3 37 17 585 21 106 3 282 53 Alloprevotella sp._HMT_308 (SP785) 14 177 8 13 40 4 39 0 5 3 4 2 20 188 14 3 4 2 Prevotella nigrescens (SP794) 75 488 11 111 3 63 60 63 48 5 9 4 12 51 6 4914 19 3 Bulleidia extructa (SP795) 0 6 26 0 19 0 4 0 0 9 15 0 0 0 0 0 18 0 Capnocytophaga granulosa (SP798) 33 10 23 37 5 23 8 3 38 31 729 6 4 63 8 11 12 32 Limosilactobacillus mucosae (SP804) 0 0 0 7 0 1 0 0 1 0 6 0 0 0 0 553 0 0 Prevotella maculosa (SP807) 178 16 6 27 6 10 8 5 16 15 10 2 4 2 11 16 27 6 Treponema sp._HMT_238 (SP809) 0 57 0 0 0 0 0 0 0 16 23 49 0 0 0 0 14 0 Tannerella forsythia (SP810) 0 9 9 0 2 0 0 1 2 13 51 52 13 1 0 0 0 0 Haemophilus parainfluenzae (SP816) 1238 4245 839 1403 268 2769 1510 5 1329 2691 1106 4282 1101 5903 1208 264 512 3344 Haemophilus parahaemolyticus (SP821) 0 0 20 0 211 0 0 0 0 23 0 0 0 481 504 294 1 187 Bergeyella sp._HMT_206 (SP823) 0 311 181 1 3 6 5 0 263 0 101 59 42 1 0 444 0 67 Prevotella aurantiaca (SP825) 3 91 0 0 0 0 73 0 3 6 1 1 0 316 0 0 0 4 Rothia dentocariosa (SP828) 41 463 62 1153 58 294 22 271 89 413 240 189 122 16 70 167 1509 49 Treponema sp._HMT_951 (SP853) 0 7 3 0 2 0 0 3 0 0 0 3 0 0 0 0 4 0 Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP854) 0 0 0 0 0 0 0 0 0 13 11 3 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP857) 25 2 23 0 0 0 0 2 0 12 1 2 4 0 1 31 10 2 Actinomyces graevenitzii (SP858) 9 142 5 0 863 2 0 0 0 26 41 73 86 43 38 0 21 4 Triticum aestivum (SP869) 0 5 36 0 0 0 0 831 6 2 1 1 0 3 0 22 0 1 Filifactor alocis (SP877) 0 23 17 0 37 0 0 4 3 19 57 62 7 0 0 0 3 0 Lachnospiraceae_[G-2] bacterium_HMT_088 (SP881) 0 0 11 0 14 0 0 0 0 1 3 0 0 0 0 0 0 48 Treponema lecithinolyticum (SP89) 0 2 19 0 0 0 0 4 1 3 11 1 1 0 0 64 22 0 Granulicatella elegans (SP892) 149 526 1608 172 2117 2680 2297 344 730 813 721 1906 2210 102 1446 229 2299 1776 Leptotrichia sp._HMT_221 (SP893) 473 488 286 5 199 26 646 78 32 23 252 138 623 105 149 28 134 34 Treponema sp._HMT_246 (SP96) 0 39 0 0 1 3 0 0 0 27 57 10 16 0 0 0 11 1 Centipeda periodontii (SP98) 14 0 0 1 2 4 3 7 3 8 33 1 5 1 0 1 6 5 Leptotrichia trevisanii (SP99) 10 10 78 7 1 8 8 7 6 10 6 5 2 45 6 21 3 11 Prevotella sp._HMT_313_veroralis (SPP1) 130 55 0 5 18 0 35 0 4 15 13 51 29 80 61 3 21 0 Mogibacterium diversum_neglectum_pumilum_vescum (SPP100) 16 19 11 3 67 0 3 1 0 11 21 20 10 5 11 15 55 7 Atopobium_Lancefieldella parvula_parvulum (SPP101) 33 102 27 4 263 0 30 4 1 18 19 31 21 46 29 3 64 13 Eikenella_Neisseria canis_halliae (SPP103) 12 7 0 23 12 32 0 2 6 13 23 4 1 0 0 0 0 5 Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP106) 73 19 1 8 7 3 8 6 10 25 45 0 24 1 9 21 47 13 Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP107) 33 274 1106 509 1811 629 2253 105 3090 380 871 755 1468 337 487 31 432 801 Centipeda_Selenomonas dianae_noxia_periodontii (SPP11) 165 3 0 1 1 8 0 0 1 3 14 0 0 2 1 6 10 0 Bacteroidaceae_[G-1]_Phocaeicola abscessus_bacterium_HMT_272 (SPP111) 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 Streptococcus anginosus_constellatus (SPP112) 3 3 41 8 16 0 13 28 1 76 91 55 13 0 3 14 36 5 Veillonella atypica_dispar (SPP113) 937 4588 213 222 1460 296 749 72 106 170 212 313 778 1709 581 80 696 76 Lautropia dentalis_mirabilis (SPP115) 70 8 139 1 120 8 14 54 1537 86 37 46 1 2376 19 79 67 213 Schaalia odontolytica_odontolyticus_sp._HMT_180 (SPP116) 41 899 8 14 159 7 1 2 1 40 102 42 26 4 21 1 30 23 Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP118) 290 290 86 280 85 168 3 268 79 211 656 47 44 51 89 17 486 165 Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP119) 207 33 17 128 1 0 3 106 28 43 85 1 4 3 22 11 36 4 Treponema medium_sp._HMT_237 (SPP121) 5 21 3 0 1 0 0 4 2 16 3 4 1 2 0 16 0 1 Kocuria assamensis_palustris (SPP122) 2 1 7 2 1 0 0 12 660 0 1 0 0 0 29 0 1 2 Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP123) 5 13 13 3 5 14 14 5 10 16 11 11 6 7 4 9 6 7 Hallella_Prevotella dentalis_seregens (SPP125) 0 1 0 0 0 0 0 2 2 1 5 18 3 0 0 0 1 0 Aggregatibacter aphrophilus_paraphrophilus (SPP129) 1 0 54 0 25 0 0 2 161 16 0 65 8 178 34 0 5 23 Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP130) 49 25 10 9 28 0 14 32 4 2 28 2 8 53 15 42 9 1 Leptotrichia_Pseudoleptotrichia goodfellowii (SPP134) 4 3 23 46 0 4 1 0 6 0 7 6 3 92 11 19 6 2 Tannerella sp._HMT_286_sp._HMT_808 (SPP135) 152 14 12 46 7 15 45 1 12 53 102 17 12 12 3 15 27 46 Campylobacter rectus_showae (SPP139) 28 43 24 22 19 10 0 12 19 20 112 93 18 1 8 39 2 37 Catonella morbi_sp._HMT_164 (SPP14) 7 10 1 1 0 2 1 6 0 26 36 15 1 7 1 4 7 2 Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP145) 1 0 21 2 35 2 53 0 37 26 1 437 163 13 38 0 5 336 Porphyromonas endodontalis_sp._HMT_285 (SPP147) 0 12 10 0 1 0 0 2 12 73 419 347 14 1 0 0 67 1 Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP153) 139 196 64 1372 32 255 169 9 349 430 557 573 77 76 114 62 70 132 Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP154) 3056 252 1406 588 345 6855 1445 62 4628 3425 3655 711 150 4313 495 313 1323 2300 Streptococcus salivarius_thermophilus_vestibularis (SPP155) 651 804 670 416 4024 29 32 790 103 267 334 743 432 1 2780 6 773 1532 Atopobium_Lancefieldella rimae (SPP156) 12 5 22 4 0 0 13 17 1 5 15 1 1 0 1 42 45 6 Leptotrichia buccalis_sp._HMT_225 (SPP16) 72 0 17 2 0 0 14 2 4 2 19 19 16 4 5 7 8 47 Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP160) 7 78 265 10 33 0 147 0 152 41 6 150 129 139 54 11 0 653 Kingella_Neisseria denitrificans_elongata (SPP167) 101 42 61 10 6 263 8 1 187 228 872 34 19 80 90 28 15 72 Bifidobacterium dentium_moukalabense (SPP169) 1 0 0 0 0 0 0 0 0 0 95 0 0 0 0 2886 37 0 Prevotella scopos_sp._HMT_314 (SPP170) 59 78 20 1 0 0 32 14 33 63 14 88 69 1 105 0 18 0 Fusobacterium nucleatum_subsp._animalis_simiae (SPP171) 108 4 7 9 11 0 19 2 11 31 33 10 5 0 16 458 28 14 Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP2) 3428 7956 10046 7636 7510 12245 13171 2346 8102 7677 10059 11673 6628 44 8301 2393 13160 11128 Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP28) 5 21 0 5 7 1 0 0 0 4 7 5 0 0 0 0 3 1 Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP3) 1010 222 139 144 236 34 89 156 375 1358 1267 996 522 2 1645 84 534 1059 Lachnoanaerobaculum gingivalis_umeaense (SPP31) 95 20 18 8 2 69 27 0 3 63 81 46 28 8 10 3 16 87 Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP33) 204 158 7 28 120 7 19 6 86 748 344 513 161 0 292 11 91 266 Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP34) 282 1030 332 309 3526 104 26 43 58 1046 136 876 393 3 614 9 181 505 Streptococcus lactarius_peroris_sp._HMT_074 (SPP35) 12 10 2 5 1 0 3 1 10 38 23 23 41 0 43 0 5 28 Neisseria cinerea_flavescens_perflava_subflava (SPP39) 618 1058 4702 46 140 764 65 1 422 2523 1594 2384 3883 491 656 116 31 2042 Prevotella loescheii_sp._HMT_472 (SPP44) 68 10 19 0 10 1 3 2 12 11 23 1 2 7 5 1 1 55 Porphyromonas pasteri_sp._HMT_278 (SPP45) 199 135 33 58 47 792 168 1 51 135 194 978 109 41 183 13 17 439 Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP46) 16 128 26 0 370 113 15 3 42 8 6 40 24 9 463 3 253 94 Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP47) 2 0 12 0 0 1 1 4 0 44 18 23 9 1 0 0 21 39 Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP5) 580 236 99 262 321 381 35 52 121 1091 858 650 196 2 411 97 721 429 Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP51) 91 2 0 19 2 27 5 2 26 23 49 13 17 1 13 91 87 41 Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP52) 124 71 0 13 6 0 6 1 9 39 61 36 27 19 11 4 6 47 Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP53) 566 76 47 156 23 165 75 5 210 197 491 52 126 46 89 30 74 374 Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP54) 163 163 197 228 22 79 20 41 100 61 251 12 27 4 45 95 116 32 Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP55) 386 121 185 105 29 41 75 16 23 98 111 35 49 4 74 2779 124 46 Veillonella parvula_rogosae_tobetsuensis (SPP57) 252 84 58 77 23 120 140 18 57 82 43 106 140 213 187 138 52 332 Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP60) 122 114 10 17 139 2 9 42 51 83 94 239 131 0 811 0 52 432 Fusobacterium hwasookii_sp._HMT_370 (SPP61) 585 22 23 32 409 19 152 5 20 165 253 113 71 14 26 24 17 383 Prevotella sp._HMT_306_vespertina (SPP62) 250 621 38 4 1050 0 186 29 15 10 22 101 98 1497 111 33 361 5 Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_313_sp ...(7 species) (SPP63) 28 56 0 0 5 0 21 0 1 2 4 21 41 61 42 1 6 0 Peptococcus sp._HMT_167_sp._HMT_168 (SPP66) 43 15 11 0 2 0 0 2 2 3 4 9 1 0 0 31 0 2 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP67) 3 3 25 1 1 0 0 0 6 8 19 0 0 65 4 26 3 16 Prevotella shahii_sp._HMT_317 (SPP69) 188 8 1 19 2 19 2 0 14 1 7 4 13 0 15 37 0 27 Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_313 ...(6 species) (SPP70) 114 41 0 6 1 1 92 1 6 15 22 94 12 5 84 3 40 42 Prevotella jejuni_sp._HMT_313 (SPP71) 369 695 25 0 1195 0 876 3 4 20 8 82 69 290 70 24 101 4 Prevotella jejuni_scopos_sp._HMT_313_sp._HMT_314 (SPP72) 45 47 6 1 7 14 67 0 8 10 4 26 77 16 11 1 2 2 Selenomonas sp._HMT_442_sputigena (SPP73) 216 20 4 2 9 8 7 32 1 17 81 19 28 3 8 37 110 25 Kingella sp._HMT_459_sp._HMT_932 (SPP75) 6 1 28 0 0 3 0 0 0 0 4 2 2 5 3 17 4 19 Prevotella histicola_melaninogenica (SPP76) 40 264 0 0 7 0 48 0 5 9 11 40 62 148 82 5 6 9 Prevotella melaninogenica_scopos_sp._HMT_314 (SPP77) 1264 123 6 364 7 183 464 25 42 174 239 562 93 9 991 18 829 157 Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP80) 1 31 14 8 1 58 3 0 11 3 1 9 3 68 25 0 8 132 Treponema maltophilum_sp._HMT_260 (SPP81) 0 1 0 0 0 0 0 4 2 0 3 2 0 0 0 0 0 0 Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP82) 0 6 0 0 0 0 0 0 0 2 4 5 0 0 0 0 0 0 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081_stomatis (SPP84) 0 10 0 0 0 0 0 3 0 12 0 1 0 0 1 0 7 1 Alloprevotella sp._HMT_912_sp._HMT_913 (SPP86) 12 16 0 44 10 17 1 0 4 1 10 0 5 0 0 17 0 4 Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP9) 60 15 3 19 0 0 4 2 8 0 0 0 9 0 4 227 18 1 Eikenella_Kingella halliae_sp._HMT_012 (SPP91) 27 0 0 0 0 4 1 0 19 40 93 1 0 3 10 0 0 8 Streptococcus dentirousetti_downei_sobrinus (SPP92) 40 2 0 13 0 1 0 16 3 0 3 2 0 0 73 3 0 11 Leptotrichia sp._HMT_215_sp._HMT_217 (SPP96) 5 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 4 Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP97) 610 537 3543 929 2046 1772 1369 267 545 4130 5068 4994 2592 219 5101 130 2718 4937 Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP98) 12 3 0 2 0 45 4 0 18 5 5 5 6 0 3 5 7 7