Taxon HAKU.10302.01 HAKU.12368.01 HAKU.12653.01 HAKU.13254.01 HAKU.13254.03 HAKU.14131.01 HAKU.15133.01 HAKU.16063.02 HAKU.16255.04 HAKU.17043.01 HAKU.17251.01 HAKU.17575.01 HAKU.17575.08 HAKU.18078.01 HAKU.19356.05 HAKU.21309.01 HAKU.22420.02 HAKU.22968.02 HAKU.25095.01 Leptotrichia sp._HMT_392 (SP1) 5 9 41 39 6 1 40 37 9 51 127 47 152 22 41 5 0 17 102 Prevotella veroralis (SP100) 3 50 62 19 1 24 1 1 14 15 2 217 25 5 5 1 12 8 6 Shuttleworthia satelles (SP101) 74 0 23 8 4 0 3 2 2 7 0 10 1 13 1 12 0 0 1 Prevotella micans (SP120) 0 0 12 1 5 1 12 0 5 0 26 24 6 19 5 7 0 2 0 Lachnoanaerobaculum orale (SP121) 83 231 129 166 494 1 294 384 1 99 9 13 6 170 2 135 48 33 2 Neisseria oralis (SP122) 16 48 47 29 26 16 382 94 1678 71 335 255 131 0 110 45 91 388 42 Prevotella fusca (SP127) 18 1 14 0 0 3 0 0 8 1 46 119 18 6 4 0 0 0 4 Megasphaera micronuciformis (SP137) 96 622 26 71 73 13 88 822 10 208 31 58 6 76 0 139 444 80 3 Selenomonas dianae (SP138) 1 0 111 3 0 3 0 0 0 4 15 6 51 46 5 4 0 0 0 Desulfobulbus sp._HMT_041 (SP139) 0 0 1 0 0 0 0 0 0 8 9 58 1 9 1 2 3 0 4 Prevotella salivae (SP15) 383 575 85 296 800 28 55 506 4 78 72 170 43 155 1 21 1050 81 7 Veillonella sp._HMT_780 (SP152) 6 35 462 113 6 934 9 3 4262 17 1009 1 74 240 60 223 887 493 49 Treponema sp._HMT_256 (SP153) 0 0 100 0 0 0 0 0 0 8 0 0 64 117 0 0 0 0 42 Catonella morbi (SP155) 6 6 6 6 16 1 80 11 4 18 6 17 15 45 0 32 0 67 30 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP156) 15 61 187 80 8 8 39 17 8 31 242 17 73 39 59 43 1 27 33 Bacteroidetes_[G-3] bacterium_HMT_280 (SP159) 9 0 11 0 0 3 0 0 0 19 0 24 31 26 0 6 0 0 13 Aggregatibacter actinomycetemcomitans (SP16) 0 0 0 0 0 0 338 0 0 0 1 0 59 0 32 0 0 0 0 Leptotrichia buccalis (SP160) 1 11 440 21 4 9 21 4 7 21 40 82 61 84 68 13 15 41 16 Tannerella serpentiformis (SP161) 1 24 4 7 0 0 24 1 1 15 6 0 5 5 1 3 2 27 3 Bacteroidetes_[G-5] bacterium_HMT_505 (SP169) 0 0 16 0 1 1 0 1 0 0 9 6 40 13 0 0 0 0 38 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP17) 0 4 2 2 19 31 0 0 2 40 801 4 735 331 0 27 1 0 333 Oribacterium sp._HMT_102 (SP170) 0 0 17 1 0 1 0 0 0 18 0 1 1 154 1 18 0 0 7 Alloprevotella sp._HMT_914 (SP174) 0 31 56 16 12 68 2 0 2 10 18 0 385 13 8 4 7 0 150 Prevotella sp._HMT_309 (SP175) 101 99 1 44 43 0 0 18 0 9 5 0 1 1 0 3 62 12 0 Selenomonas noxia (SP176) 0 40 23 4 0 0 25 58 6 7 23 7 2 81 8 43 1 20 10 Pseudoramibacter alactolyticus (SP19) 0 0 11 0 0 0 0 0 0 2 1 9 0 10 0 4 0 0 6 Veillonella sp._HMT_917 (SP203) 5 0 0 0 60 0 11 194 0 0 0 0 0 0 0 12 417 12 0 Peptidiphaga gingivicola (SP204) 0 5 7 31 0 0 15 15 1 7 0 0 1 11 3 8 1 7 1 Prevotella oulorum (SP206) 27 121 50 13 19 5 4 4 2 5 36 13 8 34 1 1 27 44 0 Lachnospiraceae_[G-8] bacterium_HMT_500 (SP208) 2 0 35 0 4 0 0 0 0 49 18 26 30 150 1 7 0 0 224 Abiotrophia defectiva (SP216) 12 21 560 109 31 27 512 122 10 12 33 1 5 0 88 2197 11 54 63 Prevotella pleuritidis (SP217) 1 18 4 0 0 15 12 0 50 5 567 12 7 10 4 1 0 0 0 Prevotella koreensis (SP220) 0 0 4 0 0 22 0 0 0 0 0 229 19 1 0 0 0 0 1 Prevotella sp._HMT_300 (SP23) 59 7 4 1 0 1 0 0 2 2 22 1 2 11 1 0 0 9 0 Butyrivibrio sp._HMT_455 (SP243) 16 41 0 2 85 0 116 38 0 2 2 11 1 0 0 0 16 3 1 Porphyromonas gingivalis (SP248) 67 259 256 3 0 553 2 0 0 104 530 0 161 94 0 46 4 0 199 Dialister invisus (SP253) 1029 43 454 18 5 4 36 20 16 73 122 117 26 238 5 162 3 11 111 Leptotrichia sp._HMT_225 (SP254) 2 13 92 37 9 8 103 7 12 33 63 203 257 10 190 18 14 39 9 Prevotella multisaccharivorax (SP255) 1 0 0 20 0 3 1 0 0 62 3 0 0 8 0 0 1 0 0 Fretibacterium fastidiosum (SP256) 3 1 22 0 0 3 0 0 1 5 4 67 2 17 3 4 0 0 3 Prevotella baroniae (SP257) 81 7 58 2 0 23 0 0 0 18 40 42 207 187 9 11 4 0 7 Stomatobaculum longum (SP266) 31 238 16 68 148 0 159 487 0 46 3 16 0 42 0 55 51 15 1 Prevotella pallens (SP267) 610 55 115 134 85 64 108 408 7 54 83 296 25 233 0 22 384 104 9 Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP269) 0 0 45 2 0 6 0 1 0 199 0 47 8 239 0 47 0 0 248 Prevotella sp._HMT_472 (SP278) 0 13 1 2 0 0 9 0 3 0 4 0 52 0 3 17 1 0 5 Parvimonas micra (SP282) 56 2 10 1 4 19 140 14 0 64 15 25 6 43 7 623 1 0 49 Campylobacter gracilis (SP283) 14 27 33 2 0 0 92 26 17 18 10 14 3 60 2 65 8 16 21 Bacteroidetes_[G-5] bacterium_HMT_507 (SP285) 0 8 123 0 0 0 0 0 0 17 0 0 14 70 0 0 0 0 67 Leptotrichia sp._HMT_417 (SP286) 721 709 375 404 921 25 258 147 19 252 211 140 136 528 28 49 185 48 14 Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP290) 0 0 17 0 0 1 0 3 0 7 0 0 0 29 0 3 0 0 25 Prevotella multiformis (SP291) 5 0 259 3 10 32 0 1 0 34 0 1 13 28 11 2 1 3 8 Leptotrichia shahii (SP292) 1 27 8 174 4 0 31 18 7 8 20 11 84 35 36 24 15 29 0 Fusobacterium nucleatum (SP293) 471 67 227 76 42 135 155 99 66 208 584 60 240 395 84 81 16 93 296 Campylobacter concisus (SP294) 144 147 13 19 148 20 192 45 12 23 101 9 14 115 10 22 33 323 14 Leptotrichia sp._HMT_909 (SP295) 1 3 67 1 0 1 0 7 0 3 0 15 9 2 8 1 0 2 16 Pseudostreptobacillus hongkongensis (SP297) 2 0 2 4 0 301 1 0 1 0 0 0 0 0 7 0 0 1 3 Cardiobacterium valvarum (SP298) 0 6 5 0 1 0 0 8 0 2 1 12 2 3 0 5 0 3 1 Prevotella denticola (SP300) 358 275 76 19 0 39 9 2 9 53 29 440 4 32 2 10 2 5 5 Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 (SP301) 4 5 6 0 2 10 2 4 0 29 6 0 2 39 1 23 0 0 16 Streptococcus hongkongensis (SP304) 2 1 13 29 83 0 9 53 1 12 1 0 0 5 3 2 9 0 0 Prevotella intermedia (SP307) 265 34 163 0 0 1172 0 1 0 38 1355 315 2613 66 73 115 1 0 202 Granulicatella adiacens (SP310) 192 688 241 1536 1282 255 993 1454 169 471 395 490 68 420 54 1252 364 793 801 Ottowia sp._HMT_894 (SP313) 0 0 2 0 0 0 0 0 0 0 1 0 1 0 2 0 0 9 7 Oribacterium sp._HMT_078 (SP323) 42 8 9 1 1 0 119 1 0 13 2 2 0 10 0 70 3 7 2 Atopobium sp._HMT_199 (SP328) 534 3 11 9 4 0 0 10 1 29 3 16 1 18 3 95 0 0 16 Rothia aeria (SP329) 8 17 56 106 16 0 60 8 184 13 2 12 1 0 24 295 8 48 39 Bacteroidales_[G-2] bacterium_HMT_274 (SP330) 0 20 124 2 19 7 144 0 46 12 278 139 62 27 2 16 0 0 23 Kingella oralis (SP332) 0 25 17 87 3 0 9 13 10 1 0 3 6 10 11 170 34 5 0 Treponema sp._HMT_257 (SP333) 14 10 97 1 0 0 0 0 4 0 0 15 105 485 0 275 0 0 132 Capnocytophaga sp._HMT_901 (SP337) 0 0 0 0 0 1 0 0 0 0 0 0 4 0 3 0 0 0 0 Oribacterium parvum (SP338) 11 9 8 14 92 1 83 138 0 156 12 35 10 1 0 4 0 59 9 Neisseria sp._HMT_018 (SP342) 3 0 0 113 41 0 13 20 0 0 0 1 1 0 7 0 9 16 0 Prevotella sp._HMT_443 (SP343) 3 21 214 3 6 96 0 0 0 66 10 373 168 235 4 46 0 0 218 Prevotella shahii (SP344) 0 1 3 0 9 6 12 0 1 18 51 198 12 0 0 1 0 18 6 Streptococcus intermedius (SP345) 1 9 24 5 5 1 133 5 0 2 19 4 0 11 8 30 1 0 8 Prevotella sp._HMT_313 (SP346) 264 361 167 137 144 503 1 108 6 34 206 30 281 72 26 30 667 500 14 Alloprevotella tannerae (SP347) 150 71 139 18 87 97 71 66 10 38 639 8 35 8 40 22 5 0 12 Treponema socranskii (SP355) 27 4 229 0 4 8 15 0 1 18 62 122 23 173 3 14 0 0 34 Campylobacter sp._HMT_044 (SP357) 13 0 4 0 14 10 0 15 0 45 10 1 6 135 0 14 0 1 22 Prevotella melaninogenica (SP36) 2398 1695 202 207 569 599 583 689 70 230 1532 168 864 679 61 114 2094 435 196 Pinus sylvestris (SP365) 0 3 1 2 0 0 0 3 0 0 3 6 1 0 0 2 10 180 3 Fusobacterium periodonticum (SP366) 2170 352 799 569 696 1058 719 589 240 3486 1557 369 2540 2563 153 258 242 1793 2913 Prevotella histicola (SP37) 971 1098 104 1009 445 53 13 494 12 102 218 7 31 89 29 60 2115 437 4 Treponema sp._HMT_231 (SP381) 2 3 7 0 0 1 0 0 7 2 37 2 0 1 0 4 0 0 6 Fusobacterium nucleatum_subsp._vincentii (SP389) 472 158 127 30 43 820 152 21 96 42 1158 164 257 40 52 155 14 0 459 Johnsonella sp._HMT_166 (SP39) 0 0 12 4 0 1 0 0 0 7 0 46 0 2 0 4 0 0 16 Mogibacterium timidum (SP391) 0 0 17 0 0 3 0 0 0 13 1 2 0 10 3 43 0 0 38 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP392) 27 114 5 50 286 4 112 658 1 66 4 0 2 10 2 43 4 62 18 Schaalia lingnae_[Not_Validly_Published] (SP400) 7 28 6 34 98 1 90 150 0 37 0 66 0 6 0 93 4 4 7 Corynebacterium durum (SP401) 2 36 19 46 13 2 18 45 81 27 2 1 2 48 12 241 4 19 33 Corynebacterium matruchotii (SP402) 1 28 26 15 5 0 95 24 8 73 4 2 4 28 99 13 4 7 21 Prevotella sp._HMT_942 (SP407) 0 0 100 15 0 0 0 0 1 1 86 0 24 0 52 0 2 21 7 Peptidiphaga sp._HMT_183 (SP409) 0 0 0 2 2 0 5 10 0 6 0 0 0 0 0 7 0 1 0 Porphyromonas sp._HMT_930 (SP418) 0 18 3 86 15 2654 4 0 2176 2 468 2036 45 14 43 2 184 87 34 Streptobacillus felis (SP419) 0 0 4 0 0 0 0 0 0 13 0 17 0 33 0 0 0 0 523 Lachnospiraceae_[G-3] bacterium_HMT_100 (SP42) 4 7 35 2 16 6 127 21 1 304 21 96 50 46 16 53 0 9 85 Mitsuokella sp._HMT_521 (SP420) 0 44 1 0 0 0 4 0 1 1 3 0 1 0 1 0 26 0 0 Alloprevotella sp._HMT_912 (SP421) 10 0 43 2 2 0 0 1 1 28 21 4 68 16 4 3 0 0 15 Leptotrichia sp._HMT_498 (SP424) 5 31 120 99 14 1 30 41 6 22 72 53 6 115 19 5 9 1 1 Treponema sp._HMT_262 (SP425) 0 0 115 0 6 0 0 0 0 0 0 38 121 73 0 0 0 0 8 Oribacterium sinus (SP427) 54 11 23 65 49 1 89 90 35 64 28 15 4 21 3 97 14 263 35 Bacteroidetes_[G-5] bacterium_HMT_511 (SP428) 6 0 38 0 1 4 0 1 28 0 145 41 33 1 7 3 7 0 12 Prevotella sp._HMT_317 (SP429) 2 35 16 4 2 16 9 2 1 14 48 17 34 2 5 9 10 2 21 Schaalia sp._HMT_172 (SP44) 34 646 7 125 117 0 549 407 10 201 113 13 12 25 27 183 166 33 1 Solobacterium moorei (SP455) 61 138 33 81 647 10 379 231 2 281 29 27 11 47 1 132 29 68 90 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP456) 4 0 0 67 6 1 4 9 3 6 81 0 275 10 1 45 1 0 177 Kingella sp._HMT_012 (SP457) 10 4 0 38 0 1 14 0 8 0 1 1 0 8 6 19 0 2 1 Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP46) 40 2 0 0 0 0 0 1 3 1 2 9 0 8 0 2 0 0 4 Leptotrichia sp._HMT_212 (SP464) 13 3 19 55 10 7 23 42 21 26 157 48 77 2 19 101 7 61 117 Capnocytophaga sputigena (SP468) 11 14 4 29 3 9 31 0 17 1 30 5 56 13 17 23 21 36 28 Capnocytophaga leadbetteri (SP469) 11 27 12 35 3 9 81 2 3 6 124 6 44 4 18 23 10 45 35 Leptotrichia sp._HMT_217 (SP470) 0 0 11 0 34 3 0 0 0 0 129 85 21 0 0 0 0 0 4 Butyrivibrio sp._HMT_080 (SP477) 2 1 19 1 3 0 0 0 1 11 18 4 3 2 0 13 0 0 25 Selenomonas flueggei (SP478) 0 17 1 0 0 0 12 3 0 1 7 0 0 0 0 0 0 2 0 Rothia mucilaginosa (SP479) 1870 1548 417 5901 2830 117 1445 3643 258 1273 641 45 198 1807 65 342 1070 2050 956 Prevotella sp._HMT_304 (SP48) 0 16 204 0 0 84 0 0 0 98 0 66 0 200 11 18 3 0 190 Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP487) 1 2 0 0 7 1 106 4 1 5 9 12 5 12 5 26 0 0 52 Treponema denticola (SP490) 9 2 249 6 0 57 0 1 13 44 107 343 171 226 4 13 2 0 484 Prevotella sp._HMT_305 (SP491) 57 34 0 10 23 0 5 7 0 0 8 0 0 0 0 1 102 0 0 Veillonellaceae_[G-1] bacterium_HMT_155 (SP492) 0 6 4 0 0 0 8 0 1 2 10 8 0 27 1 3 0 0 1 Anaeroglobus geminatus (SP493) 751 11 294 0 0 2 18 1 6 35 47 47 12 131 0 3 1 1 25 Prevotella sp._HMT_526 (SP494) 53 0 16 0 0 17 0 0 0 1 0 11 23 5 0 0 1 0 2 Mycoplasma faucium (SP495) 8 0 0 0 0 82 3 0 0 8 0 11 27 0 2 6 0 0 6 Atopobium sp._HMT_416 (SP509) 0 0 0 0 0 0 2 0 0 10 0 0 0 0 0 0 0 0 1 Eikenella corrodens (SP51) 0 6 12 0 6 2 14 14 13 64 17 12 49 34 9 151 6 2 23 Leptotrichia hongkongensis (SP511) 15 81 42 127 1 0 46 64 23 2 20 18 6 89 31 21 52 35 2 Eikenella halliae (SP513) 21 13 9 136 3 1 37 19 4 3 11 7 26 9 22 88 12 18 20 Lachnospiraceae_[G-2] bacterium_HMT_096 (SP517) 19 72 20 20 1329 1 228 256 1 268 7 2 2 124 11 39 20 0 2 Leptotrichia hofstadii (SP518) 3 68 46 45 4 2 55 74 7 9 9 15 29 63 4 2 8 5 5 Romboutsia timonensis (SP519) 0 0 0 2 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 Treponema amylovorum (SP520) 0 0 14 0 1 275 0 0 0 12 57 9 1 36 87 0 0 0 10 Leptotrichia sp._HMT_219 (SP521) 0 9 0 14 0 0 5 6 17 0 20 35 4 0 4 17 1 17 6 Prevotella saccharolytica (SP534) 0 1 15 0 0 3 3 0 0 1 24 10 5 7 0 2 0 0 3 Streptococcus sanguinis (SP535) 15 92 614 97 24 4 434 26 520 93 26 15 22 46 184 649 188 109 47 Prevotella oris (SP537) 1419 52 244 15 6 48 46 24 43 4 489 319 75 142 73 94 6 24 54 Bergeyella sp._HMT_931 (SP540) 1 0 1 0 0 147 10 1 289 1 17 20 4 3 0 0 19 13 19 Prevotella sp._HMT_396 (SP543) 55 29 23 0 4 13 1 2 0 4 9 20 18 2 0 1 0 18 2 Fretibacterium sp._HMT_360 (SP553) 0 0 10 0 2 1 0 1 0 1 2 61 0 3 0 0 0 0 6 Leptotrichia wadei (SP554) 7 105 50 83 5 2 21 90 4 11 15 4 12 155 2 31 31 32 0 Streptococcus anginosus (SP567) 11 13 846 35 4 0 13 12 0 31 0 164 0 363 9 66 2 3 12 Prevotella nanceiensis (SP568) 136 17 8 315 176 45 9 4 10 7 25 424 206 48 49 24 35 963 259 Veillonella dispar (SP570) 46 390 127 217 8 128 77 473 145 101 377 19 14 35 12 872 461 444 6 Lautropia mirabilis (SP58) 17 42 224 3 13 1 725 0 192 130 195 2 145 0 15 763 53 51 31 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP598) 91 89 30 22 6 9 42 92 10 25 43 2 15 38 0 42 131 3 32 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP606) 0 0 30 0 0 1 0 1 0 114 2 1 0 19 0 16 0 0 90 Fusobacterium sp._HMT_248 (SP607) 0 0 25 49 0 716 0 0 0 6 0 0 135 172 732 0 0 0 110 Cryptobacterium curtum (SP612) 55 4 8 4 0 0 0 2 0 1 0 0 0 0 0 0 0 0 2 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP613) 0 0 0 0 64 13 0 35 0 19 84 0 120 0 0 2 0 0 511 Stomatobaculum sp._HMT_097 (SP614) 221 77 16 104 185 1 204 73 8 304 30 42 4 113 13 136 26 68 32 Oribacterium asaccharolyticum (SP619) 20 45 4 44 205 2 148 221 2 19 4 1 0 4 0 29 18 68 0 Bergeyella sp._HMT_322 (SP623) 65 68 14 9 15 39 83 2 53 10 94 1 56 17 1 16 45 96 302 Bergeyella sp._HMT_907 (SP624) 10 7 8 2 1 1 0 0 3 0 43 0 8 8 1 8 8 0 12 Leptotrichia sp._HMT_847 (SP663) 2 51 5 3 3 1 44 0 13 6 1 38 1 0 1 1 5 5 1 Capnocytophaga gingivalis (SP682) 7 13 1 0 2 0 34 19 3 24 13 0 9 8 8 18 9 18 23 Lachnoanaerobaculum saburreum (SP687) 0 23 4 11 0 0 55 31 0 8 11 2 0 13 0 13 5 5 0 Alloprevotella rava (SP691) 367 501 54 30 164 93 13 6 7 43 16 208 19 100 12 9 133 4 30 Peptostreptococcus stomatis (SP693) 92 18 533 76 62 39 106 129 0 326 22 91 41 499 24 697 0 151 619 Cardiobacterium hominis (SP695) 0 15 2 51 1 0 39 16 17 6 2 16 17 0 4 1 4 11 1 Alloprevotella sp._HMT_473 (SP71) 46 10 331 126 0 3398 7 0 56 12 1729 1210 4497 355 546 86 824 911 313 Scardovia wiggsiae (SP716) 34 13 2 2 0 0 3 1 1 2 0 74 0 0 0 0 0 0 2 Dialister pneumosintes (SP717) 53 7 69 1 1 26 17 2 0 23 74 0 44 25 3 83 0 0 116 Leptotrichia sp._HMT_215 (SP75) 165 86 58 299 226 53 576 461 20 472 144 117 106 199 77 479 16 84 401 Capnocytophaga sp._HMT_332 (SP756) 0 0 2 3 0 2 15 1 0 0 13 0 27 0 0 7 1 3 1 Streptococcus mutans (SP76) 0 15 54 39 0 0 95 59 5 0 0 0 0 0 2 0 0 0 0 Leptotrichia sp._HMT_218 (SP78) 36 438 147 14 758 7 59 305 1 158 9 10 9 5 0 0 76 29 0 Alloprevotella sp._HMT_308 (SP785) 326 423 32 15 62 69 12 13 2 4 32 1 30 6 1 4 96 230 1 Prevotella nigrescens (SP794) 1121 154 42 2 1 169 2 1 40 10 1251 21 61 0 3 1 9 83 8 Bulleidia extructa (SP795) 1 1 2 0 1 1 0 0 0 7 3 1 0 29 0 53 0 0 5 Capnocytophaga granulosa (SP798) 23 19 9 20 5 3 37 7 4 3 35 3 27 3 20 11 6 37 11 Limosilactobacillus mucosae (SP804) 1 0 0 5 0 0 0 1 0 6 9 0 0 4 0 0 0 0 1 Prevotella maculosa (SP807) 11 11 30 1 0 3 13 4 1 3 28 9 15 29 5 4 0 4 4 Treponema sp._HMT_238 (SP809) 0 0 0 1 0 0 0 0 0 15 0 165 0 59 0 0 0 0 82 Tannerella forsythia (SP810) 3 25 67 5 1 33 0 1 27 54 122 86 53 81 4 5 3 0 101 Haemophilus parainfluenzae (SP816) 4189 2184 849 4161 1933 4871 2591 1441 3555 2579 3369 159 395 290 1229 1527 5409 8092 1658 Haemophilus parahaemolyticus (SP821) 105 0 2 367 95 51 83 0 1 13 688 0 0 0 65 0 0 0 72 Bergeyella sp._HMT_206 (SP823) 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2269 1 602 Prevotella aurantiaca (SP825) 174 570 2 0 28 11 0 113 4 16 17 116 26 0 1 4 4 25 1 Rothia dentocariosa (SP828) 42 464 282 408 8 2 105 173 644 8 22 16 3 1148 5 448 28 8 46 Treponema sp._HMT_951 (SP853) 0 19 112 0 0 0 0 0 8 2 0 0 37 12 0 3 0 0 38 Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP854) 0 0 4 0 0 1 0 0 0 37 1 11 1 43 1 7 0 0 10 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP857) 13 0 25 0 0 1 2 4 0 16 9 5 3 239 4 50 0 1 27 Actinomyces graevenitzii (SP858) 4 467 17 98 214 0 554 235 1 226 2 81 6 17 8 198 16 17 3 Filifactor alocis (SP877) 44 13 120 0 10 104 0 6 7 241 49 51 75 476 4 127 0 0 513 Lachnospiraceae_[G-2] bacterium_HMT_088 (SP881) 0 0 0 0 0 0 0 0 1 0 0 91 42 0 7 0 0 1 6 Treponema lecithinolyticum (SP89) 0 22 5 0 1 5 0 0 22 1 123 26 11 6 4 36 0 0 0 Granulicatella elegans (SP892) 97 430 663 1004 302 1533 272 46 2186 27 2279 1310 169 421 819 820 1017 995 904 Leptotrichia sp._HMT_221 (SP893) 377 382 4 173 65 13 190 192 11 192 128 174 19 311 10 16 65 34 0 Treponema sp._HMT_246 (SP96) 0 108 215 0 2 0 0 1 0 11 0 0 0 18 0 0 0 0 135 Centipeda periodontii (SP98) 0 2 15 0 0 0 8 5 0 8 4 2 16 101 0 3 1 0 18 Leptotrichia trevisanii (SP99) 0 9 3 1 2 0 15 7 5 2 8 6 0 0 2 0 3 5 0 Prevotella sp._HMT_313_veroralis (SPP1) 157 74 30 27 52 69 1 91 0 27 42 1 9 34 5 1 107 13 1 Mogibacterium diversum_neglectum_pumilum_vescum (SPP100) 3 19 82 58 216 2 317 781 0 204 0 1 0 125 6 153 1 8 44 Atopobium_Lancefieldella parvula_parvulum (SPP101) 174 544 99 128 1750 6 384 996 4 151 6 83 12 150 0 363 188 83 16 Eikenella_Neisseria canis_halliae (SPP103) 0 0 1 20 0 1 8 35 2 0 29 0 16 0 23 4 2 2 1 Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP106) 0 5 198 6 2 5 11 3 4 16 108 31 26 264 15 18 4 1 27 Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP107) 1689 563 348 1596 133 1077 598 38 2962 172 431 422 695 724 580 444 488 78 464 Centipeda_Selenomonas dianae_noxia_periodontii (SPP11) 4 8 29 1 0 0 2 1 0 0 5 8 1 85 0 0 0 0 2 Bacteroidaceae_[G-1]_Phocaeicola abscessus_bacterium_HMT_272 (SPP111) 2 2 53 0 0 0 0 0 0 2 33 78 7 35 0 11 1 0 10 Streptococcus anginosus_constellatus (SPP112) 0 2 99 8 9 15 38 22 0 10 6 21 8 189 7 79 1 2 144 Veillonella atypica_dispar (SPP113) 1210 4397 106 1306 2579 110 692 3279 174 328 386 17 72 454 20 691 3403 413 6 Lautropia dentalis_mirabilis (SPP115) 39 1 27 8 16 0 200 12 188 4 77 2 23 0 9 75 28 51 3 Schaalia odontolytica_odontolyticus_sp._HMT_180 (SPP116) 33 131 16 161 589 1 466 313 4 323 1 2 12 74 8 854 10 40 22 Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP118) 2 79 60 135 13 0 109 36 9 23 7 4 3 17 18 1754 19 6 4 Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP119) 1 3 0 7 3 0 15 10 4 12 0 1 0 0 6 26 1 1 1 Treponema medium_sp._HMT_237 (SPP121) 11 6 13 0 0 3 0 0 3 8 36 220 63 99 0 9 0 0 55 Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP123) 13 7 12 11 11 16 5 9 9 12 20 8 9 9 13 9 31 15 21 Hallella_Prevotella dentalis_seregens (SPP125) 7 2 52 0 0 94 0 0 6 1 0 22 3 70 0 0 0 0 33 Aggregatibacter aphrophilus_paraphrophilus (SPP129) 5 1 4 0 0 40 0 1 0 8 0 2 246 18 65 2 45 133 14 Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP130) 6 57 6 9 84 0 55 20 1 18 4 7 4 6 0 13 23 2 3 Leptotrichia_Pseudoleptotrichia goodfellowii (SPP134) 1 16 0 8 5 2 122 15 3 1 29 21 5 0 0 9 1 6 0 Tannerella sp._HMT_286_sp._HMT_808 (SPP135) 32 32 46 0 1 6 70 1 8 24 64 111 70 14 12 19 1 2 19 Campylobacter rectus_showae (SPP139) 58 75 175 15 6 73 25 1 44 50 234 228 193 87 10 38 6 4 168 Catonella morbi_sp._HMT_164 (SPP14) 4 0 27 0 0 3 1 0 0 4 9 32 153 71 3 8 0 1 108 Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP145) 4 43 71 0 161 38 85 163 23 3711 37 0 239 1 34 21 168 125 313 Porphyromonas endodontalis_sp._HMT_285 (SPP147) 375 60 312 4 1 258 0 3 39 533 483 218 1584 1521 11 166 3 0 864 Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP153) 188 443 718 1041 92 1329 206 937 81 1931 1738 166 5496 1580 1059 287 256 405 4981 Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP154) 749 649 1219 1300 90 2665 1681 168 2249 75 873 212 281 1290 361 2670 3219 667 593 Streptococcus salivarius_thermophilus_vestibularis (SPP155) 44 344 1051 706 1948 2 1179 1995 65 280 37 51 30 108 120 66 363 75 0 Atopobium_Lancefieldella rimae (SPP156) 179 18 164 10 1 0 7 9 1 12 0 62 0 11 1 43 1 0 2 Leptotrichia buccalis_sp._HMT_225 (SPP16) 11 2 793 15 6 7 16 19 3 5 40 2 48 21 38 0 8 12 3 Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP160) 220 5 24 14 189 2203 1 0 1013 1 78 0 0 0 194 1 59 114 116 Kingella_Neisseria denitrificans_elongata (SPP167) 250 3 54 507 71 10 228 203 6 100 34 76 101 178 57 1057 24 58 488 Bifidobacterium dentium_moukalabense (SPP169) 1 0 595 15 0 0 10 4 0 9 0 0 0 11 0 31 0 0 0 Prevotella scopos_sp._HMT_314 (SPP170) 124 195 25 10 38 1808 2 13 10 13 45 4 60 77 9 1 110 39 65 Fusobacterium nucleatum_subsp._animalis_simiae (SPP171) 512 14 80 5 11 46 19 25 13 49 139 2 44 160 15 13 3 3 204 Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP2) 3363 7948 8044 7635 5627 4053 6194 3147 13310 2462 6604 17455 1529 8565 5163 9054 8700 9392 6808 Lactobacillus delbrueckii_equicursoris_leichmannii (SPP25) 0 0 0 3 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP28) 0 0 59 0 0 1 0 0 0 2 51 21 2 7 0 2 0 0 10 Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP3) 43 165 1204 1035 740 57 210 931 217 735 149 52 41 938 570 2222 427 138 186 Lachnoanaerobaculum gingivalis_umeaense (SPP31) 74 38 102 61 102 18 241 54 4 189 33 178 69 254 15 256 10 45 130 Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP33) 22 58 251 410 261 21 24 493 45 411 40 12 18 369 158 589 170 55 108 Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP34) 48 328 77 665 607 3 703 4559 36 1515 15 86 9 303 32 896 311 96 37 Streptococcus lactarius_peroris_sp._HMT_074 (SPP35) 19 6 7 76 36 0 0 55 5 9 9 0 1 38 6 7 14 10 17 Neisseria cinerea_flavescens_perflava_subflava (SPP39) 5312 263 1028 2358 8603 2295 1178 2806 173 4802 2005 6043 1270 225 3741 1526 1122 1984 5967 Prevotella loescheii_sp._HMT_472 (SPP44) 1 1 12 0 0 1 3 0 2 1 28 3 22 0 5 0 0 18 22 Porphyromonas pasteri_sp._HMT_278 (SPP45) 341 238 80 557 275 1184 58 287 184 131 424 54 818 164 516 20 266 1858 578 Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP46) 0 15 30 0 4 396 1 0 1690 2 96 1 47 103 398 0 113 172 65 Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP47) 55 8 367 2 89 22 332 11 0 504 12 20 116 559 2 3 0 3 323 Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP5) 23 314 826 474 279 17 339 2005 78 2164 57 21 77 490 176 1814 180 49 249 Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP51) 38 3 98 9 10 18 10 13 83 24 105 14 14 136 10 21 6 8 366 Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP52) 29 6 24 8 15 88 12 7 15 44 402 5 54 91 18 27 10 23 128 Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP53) 54 83 60 44 4 67 112 117 127 105 289 100 301 365 59 143 40 164 378 Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP54) 80 303 48 34 26 42 1908 29 116 13 1985 121 36 43 33 165 15 2 21 Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP55) 1217 92 198 21 40 67 694 60 98 47 1608 136 34 243 37 36 8 85 30 Veillonella parvula_rogosae_tobetsuensis (SPP57) 280 541 63 270 243 322 371 664 266 779 527 98 557 298 43 561 467 857 349 Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP60) 15 25 277 191 451 0 31 196 20 35 15 2 7 44 73 11 158 32 1 Fusobacterium hwasookii_sp._HMT_370 (SPP61) 207 51 186 47 17 145 79 29 20 187 347 103 905 655 233 121 17 58 803 Prevotella sp._HMT_306_vespertina (SPP62) 498 2323 26 271 116 38 52 705 8 123 92 5 4 11 2 4 319 58 2 Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_313_sp ...(7 species) (SPP63) 89 45 5 45 34 52 0 58 1 28 15 0 0 5 0 0 106 12 5 Peptococcus sp._HMT_167_sp._HMT_168 (SPP66) 2 3 19 1 1 0 1 0 3 32 12 72 12 8 1 0 0 0 18 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP67) 0 15 2 0 1 0 0 1 1 7 39 26 36 6 9 1 0 0 82 Prevotella shahii_sp._HMT_317 (SPP69) 0 6 0 0 0 4 0 0 0 11 2 93 1 0 0 3 0 1 2 Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_313 ...(6 species) (SPP70) 26 39 173 20 19 37 0 7 1 22 19 24 59 10 24 27 149 35 24 Prevotella jejuni_sp._HMT_313 (SPP71) 141 1419 287 54 470 46 130 339 19 99 48 118 25 21 2 57 1006 752 7 Prevotella jejuni_scopos_sp._HMT_313_sp._HMT_314 (SPP72) 89 58 27 9 60 185 3 26 0 40 11 6 13 8 2 2 176 52 38 Selenomonas sp._HMT_442_sputigena (SPP73) 97 34 480 8 17 2 9 39 3 38 89 48 20 557 15 46 0 0 23 Moraxella bovoculi_equi_lacunata_sp._HMT_276 (SPP74) 0 0 0 0 0 2495 0 0 0 0 41 8 2533 0 14 0 0 0 51 Kingella sp._HMT_459_sp._HMT_932 (SPP75) 2 0 0 0 2 1 30 2 4 0 3 0 23 1 1 0 10 73 6 Prevotella histicola_melaninogenica (SPP76) 423 77 15 134 164 7 0 142 5 37 85 2 8 25 3 4 587 52 5 Prevotella melaninogenica_scopos_sp._HMT_314 (SPP77) 78 705 1278 149 77 757 67 30 28 81 938 672 598 2335 216 532 158 178 72 Prevotella fusca_histicola_jejuni_melaninogenica_scopos_sp._H ...(7 species) (SPP8) 0 386 0 0 4 5 0 0 0 4 10 6 0 2 0 1 29 0 0 Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP80) 3 8 0 0 0 3 4 1 20 0 11 6 34 0 9 0 4 0 9 Treponema maltophilum_sp._HMT_260 (SPP81) 0 0 14 1 0 5 0 0 0 4 10 43 4 6 0 3 0 0 26 Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP82) 0 0 33 0 0 1 0 0 0 27 2 130 0 33 0 6 1 0 12 Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081_stomatis (SPP84) 1 0 6 0 0 3 0 0 0 25 1 16 39 40 2 18 0 0 0 Alloprevotella sp._HMT_912_sp._HMT_913 (SPP86) 11 2 12 9 0 0 3 4 4 6 18 1 827 9 56 27 0 0 27 Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP9) 66 11 6 1 0 1 0 0 3 3 5 12 3 6 0 1 4 30 1 Eikenella_Kingella halliae_sp._HMT_012 (SPP91) 13 0 5 61 0 0 1 1 1 2 10 0 6 34 12 73 9 2 14 Streptococcus dentirousetti_downei_sobrinus (SPP92) 2 6 0 0 0 0 16 47 1 12 0 1 0 2 0 0 4 5 0 Leptotrichia sp._HMT_212_sp._HMT_215_sp._HMT_217 (SPP94) 1 0 0 0 1 2 0 0 0 47 12 15 27 0 0 0 0 0 0 Leptotrichia sp._HMT_215_sp._HMT_217 (SPP96) 3 3 2 6 19 0 1 4 1 12 3 0 3 9 0 7 0 0 8 Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP97) 176 881 1458 2309 1540 202 5575 1932 2196 1787 658 1011 329 3952 2806 2385 451 763 3346 Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP98) 0 0 2 0 0 11 8 30 1 21 36 0 7 0 9 0 12 6 6