taxon lfc_Group_1S_mitis lfc_Group_1Negative lfc_Group_1Negative_Group_1S_mitis se_Group_1S_mitis se_Group_1Negative se_Group_1Negative_Group_1S_mitis W_Group_1S_mitis W_Group_1Negative W_Group_1Negative_Group_1S_mitis p_Group_1S_mitis p_Group_1Negative p_Group_1Negative_Group_1S_mitis q_Group_1S_mitis q_Group_1Negative q_Group_1Negative_Group_1S_mitis diff_Group_1S_mitis diff_Group_1Negative diff_Group_1Negative_Group_1S_mitis Streptococcus danieliae (SP1) -0.168306146683473 -7.61552094716926 -7.44721480048578 0.266538086592015 0.551721714685472 0.60113947860549 -0.631452520859039 -13.8031923421951 -12.3884972881197 0.527744684307223 2.43811917950508e-43 3.01642730491014e-35 1 1.38720574006323e-42 1.4146003912682e-34 FALSE TRUE TRUE Mammaliicoccus sciuri (SP10) -0.145251271344979 -5.17795135097777 -5.03270007963279 0.691904602767675 1.18088678447068 1.22016594544071 -0.209929621459319 -4.38479913491346 -4.12460296768489 0.833722602748697 1.16092851406826e-05 3.71374824116847e-05 1 6.60528292487111e-05 0.000174161986482384 FALSE TRUE TRUE Clostridium disporicum (SP111) 0.200295523680485 -3.1202513548861 -3.32054687856658 0.307899610473384 0.615562326350064 0.663781931496893 0.650522173030806 -5.06894464024044 -5.00246650444134 0.515354983949799 4.00027547768306e-07 5.66014188582131e-07 1 2.27601880626795e-06 2.65441136714378e-06 FALSE TRUE TRUE Shigella boydii (SP12) 0.638889549992709 2.59352886651883 1.95463931652612 0.459075328794639 0.838358051448152 0.882251468143256 1.39168783404283 3.09358139047971 2.21551268216052 0.164016947961957 0.00197756301044913 0.0267248948383816 0.605165980411357 0.0112516516111761 0.125330541311031 FALSE TRUE FALSE Cutibacterium acnes (SP13) -0.976373270020329 0.465040541324968 1.4414138113453 0.525603754452804 0.935907880994381 0.978246116370609 -1.8576223281297 0.496887087680973 1.47346745080173 1 1 1 1 1 1 FALSE FALSE FALSE Escherichia coli (SP16) 1.13342167301012 2.86718754284161 1.73376586983149 0.485162058239018 0.876585524305104 0.919843060425438 2.33617129320473 3.27085887610854 1.88484964927561 0.0194823158123824 0.00107221402177703 0.0594501395968853 0.091365343120138 0.00610052805493826 0.21935051506437 FALSE TRUE FALSE Shigella sonnei (SP17) 0.920289538477088 2.51255375973129 1.5922642212542 0.473952970304589 0.860156932127715 0.903683459916484 1.94173176694231 2.92104110992415 1.76197119000204 0.052169580905945 0.00348863790363296 0.0780741652442226 0.244657344938225 0.0198491466930841 0.288066747625235 FALSE TRUE FALSE Finegoldia magna (SP18) -0.342215292432714 -2.5835006193647 -2.24128532693199 0.393599176448367 0.742412395861408 0.788057134425538 -0.869451241033291 -3.47987268769551 -2.84406450880721 0.384600366453763 0.000501652105970295 0.00445420288924243 1 0.00285422749948616 0.0208886756185162 FALSE TRUE TRUE Enterococcus faecalis (SP2) -0.174260677620087 -1.45813051173806 -1.28386983411797 0.439014807242934 0.808971928087825 0.853378169909353 -0.396935763316198 -1.80244883797718 -1.50445591343677 1 1 1 1 1 1 FALSE FALSE FALSE Phyllobacterium myrsinacearum (SP22) -0.065566419507299 3.21936213523464 3.28492855474194 0.386390216759436 0.731832471753759 0.777683451859938 -0.169689647054703 4.39904248511928 4.22399183997754 0.865254216443448 1.08729541441322e-05 2.40012743386514e-05 1 6.18633597855797e-05 0.000112557700346779 FALSE TRUE TRUE Akkermansia muciniphila (SP28) 0.0270971737960791 -2.87465650795729 -2.90175368175337 0.314002175084146 0.624737106764614 0.672769168443055 0.0862961340596373 -4.60138588988982 -4.31314902326559 0.931231011586982 4.19689061139461e-06 1.6094555366958e-05 1 2.38788603751762e-05 7.54779148243548e-05 FALSE TRUE TRUE Staphylococcus ureilyticus (SP29) 2.24398918492768 -3.34808453997865 -5.59207372490633 0.533519497386295 0.947529672130803 0.989697004733743 4.20601158143414 -3.53348780355288 -5.65028862183003 2.59916919232108e-05 0.000410115011754605 1.60178663467493e-08 0.000121892072467471 0.00151318297440492 9.11361361108151e-08 TRUE TRUE TRUE Limosilactobacillus fermentum (SP3) 0.306809249825028 0.140118166717634 -0.166691083107393 0.377218603785371 0.718360924089858 0.764477889784285 0.813346019380305 0.195052601023866 -0.218045656172514 1 1 1 1 1 1 FALSE FALSE FALSE Shigella flexneri (SP30) 0.5009262667906 0.680606609224931 0.179680342434332 0.441878807202503 0.813167152873534 0.857498894817178 1.13362817728671 0.836982417230988 0.209540028005097 1 1 1 1 1 1 FALSE FALSE FALSE Citrobacter koseri (SP33) 0.0556561335499453 -0.626523227491878 -0.682179361041823 0.392613298448839 0.740965903777073 0.786638697143227 0.141758146679786 -0.845549335398804 -0.867207986994842 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus sp._MOT-012 (SP4) 1.97934441894581 -5.14542567018149 -7.12477008912731 0.4973671616188 0.894479981589887 0.93745174705873 3.97964435871393 -5.75242126831703 -7.60014593975785 6.90184399016015e-05 8.79742427643111e-09 2.957969790937e-14 0.000254654243774875 4.12568862618838e-08 1.68298281208485e-13 TRUE TRUE TRUE Escherichia fergusonii (SP40) 0.240457714565464 0.985788234503175 0.745330519937711 0.49035073158421 0.884192045283859 0.927327194393743 0.49037902684187 1.11490285369702 0.803740604657868 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus mitis (SP41) -0.421784744945678 -1.14907159087105 -0.727286845925376 0.400511795968091 0.752551696349815 0.798001084520823 -1.0531144130878 -1.52690053911847 -0.91138578635152 1 1 1 1 1 1 FALSE FALSE FALSE Mesorhizobium huakuii (SP42) -0.160878570494235 1.42263206385123 1.58351063434547 0.316504633880034 0.628488502692895 0.676443484720813 -0.508297678052998 2.26357691151971 2.34093559937092 1 1 1 1 1 1 FALSE FALSE FALSE Listeria monocytogenes (SP49) 0.331836746086366 0.386685000920271 0.054848254833905 0.383156080922484 0.72708365939791 0.773027981096397 0.86606154151968 0.531830135256348 0.0709524831896938 1 1 1 1 1 1 FALSE FALSE FALSE Ligilactobacillus murinus (SP5) 0.306551452563499 -6.0320365283517 -6.3385879809152 0.652174952954371 1.12220621993785 1.16212439072544 0.470044811096796 -5.37515870183447 -5.45431111462898 0.638323002585008 7.65152576930313e-08 4.91630616255582e-08 1 3.58830174008698e-07 2.79720867869555e-07 FALSE TRUE TRUE Corynebacterium pilbarense (SP51) -0.269182817456727 -0.285954979062233 -0.0167721616055056 0.374808289871042 0.714818079967294 0.761005592540132 -0.718188003657397 -0.400038816974686 -0.0220394722061403 1 1 1 1 1 1 FALSE FALSE FALSE Peptoniphilus lacydonensis (SP54) -0.455237107563636 -2.91176541539921 -2.45652830783557 0.417788871253606 0.777876323912131 0.822848096517497 -1.08963435573969 -3.74322411659893 -2.98539708389948 0.275874243018857 0.000181674052247305 0.0028321042008267 1 0.00103366271106225 0.0132815921142218 FALSE TRUE TRUE Cutibacterium granulosum (SP58) -0.377812731943132 -0.593394288353065 -0.215581556409933 0.434769406416081 0.802753144371966 0.847270610216951 -0.868995670733923 -0.739198958625453 -0.254442386895412 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus hominis (SP60) -0.0353167695479092 0.375676505336207 0.410993274884116 0.379708046502097 0.722018914919639 0.7680632958576 -0.0930103269426346 0.52031393855938 0.53510339200002 1 1 1 1 1 1 FALSE FALSE FALSE Corynebacterium tuberculostearicum (SP63) -0.280589070864272 -0.0982472122528655 0.182341858611406 0.450649043186907 0.826014082598247 0.870120355166224 -0.622633233347169 -0.118941328389737 0.209559352943275 1 1 1 1 1 1 FALSE FALSE FALSE Enterobacter sp._MOT-050 (SP68) 0.0908008883400845 -2.93321003575354 -3.02401092409362 0.463233083682629 0.844449422331231 0.88823916374572 0.196015551433054 -3.47351772431316 -3.40450077808022 0.844597993830188 0.000513683434375221 0.000662851114709409 1 0.00292268160937626 0.00310854315863723 FALSE TRUE TRUE Streptococcus chosunense (SP69) -0.0350252353201432 0.636002193421593 0.671027428741736 0.368970625621566 0.706232410053443 0.752591853101411 -0.0949268936006488 0.900556508548602 0.891621967440187 1 1 1 1 1 1 FALSE FALSE FALSE Corynebacterium mucifaciens (SP76) 0.0147589565594254 0.676822802649679 0.662063846090253 0.324463924869089 0.640383706367981 0.688093316669462 0.04548720343989 1.05690197286306 0.962171598025108 1 1 1 1 1 1 FALSE FALSE FALSE Thermus thermophilus (SP77) 0.0684007080591273 -0.174719005975877 -0.243119714035004 0.330450283771267 0.649298579397369 0.696823810957871 0.206992432503019 -0.269088846826121 -0.348896966796823 1 1 1 1 1 1 FALSE FALSE FALSE Mammaliicoccus lentus (SP78) 0.898682884543963 -3.59347304568703 -4.492155930231 0.48504050677964 0.876407345579831 0.919667764831307 1.85279965690009 -4.10023154622191 -4.88454211620105 0.0639110794419658 4.12736970414309e-05 1.03669482644103e-06 0.235809844837598 0.000193559406814986 5.89843608147481e-06 FALSE TRUE TRUE Salmonella enterica (SP93) 0.298641600945827 -0.22335325168208 -0.521994852627907 0.339949614374839 0.663399021302456 0.710632769605571 0.878487835601823 -0.336680104296158 -0.734549369173665 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus danieliae_nov_97.379% (SPN108) 1.93562215392472 -7.54659867953903 -9.48222083346375 0.558970864497924 0.984922783032612 1.02655962396651 3.46283192356246 -7.66212215774194 -9.23689244354411 0.000534522177785576 1.82885555997698e-14 2.53759937775903e-20 0.00197220251803643 8.57670193644378e-14 1.44380654251807e-19 TRUE TRUE TRUE Streptococcus danieliae_nov_96.787% (SPN13) 0.768174687647464 -7.86923583429999 -8.63741052194745 0.442483447312307 0.814052837222194 0.858368905829684 1.73605293556955 -9.6667384160865 -10.0625855192165 0.0825544750784412 4.17470951885318e-22 8.08467105210606e-24 0.304597545979076 1.95779480884149e-21 4.59989904688793e-23 FALSE TRUE TRUE Streptococcus danieliae_nov_93.952% (SPN131) 1.54332590358792 -5.76473555773202 -7.30806146131994 0.721413204312005 1.22452863970695 1.26336456529426 2.13930919806182 -4.70771803190461 -5.78460221386512 0.0324106352585128 2.50505281833007e-06 7.26841173302818e-09 0.119584068022789 1.17478339066514e-05 4.13547564120569e-08 FALSE TRUE TRUE Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.870% (SPN162) -0.143151251344913 -3.49801879681149 -3.35486754546658 0.342007931924875 0.666447905220703 0.713618750903188 -0.418561202774552 -5.24875053160093 -4.70120430723058 0.675536848817981 1.53134280034767e-07 2.58631579769165e-06 1 8.71281248473674e-07 1.21289292581402e-05 FALSE TRUE TRUE Streptococcus danieliae_nov_95.582% (SPN248) 1.60518011496423 -6.81565269198946 -8.42083280695369 0.443257833819498 0.815187169076483 0.859483192151456 3.62132373641902 -8.36084392705892 -9.79755379028959 0.000293099468809608 6.22711819988991e-17 1.15345133080998e-22 0.0010814359711251 2.92030370753458e-16 6.5627403304706e-22 TRUE TRUE TRUE Anaerococcus octavius_nov_94.583% (SPN269) -0.059784752299896 -2.39310344581695 -2.33331869351705 0.339510525044228 0.662748346954418 0.709995527401725 -0.176091013060958 -3.61087803057401 -3.28638505943268 0.860222441144639 0.000305162156162608 0.00101482180545094 1 0.00173626744023553 0.00475916432901132 FALSE TRUE TRUE Streptococcus danieliae_nov_93.387% (SPN363) 0.553794789479945 -5.90397028259079 -6.45776507207073 0.618423224990942 1.07242919499211 1.11293190660687 0.895494811806358 -5.5052308442929 -5.80247994844472 0.370522637979425 3.68684842488129e-08 6.53412099760575e-09 1 1.72900477856502e-07 3.71768953312051e-08 FALSE TRUE TRUE Segetibacter koreensis_nov_89.733% (SPN43) 0.025079009274131 -1.2935119446355 -1.31859095390963 0.300963747055526 0.60508224586773 0.65351370255199 0.0833290039730401 -2.13774565932026 -2.01769442440226 1 1 1 1 1 1 FALSE FALSE FALSE Prevotella shahii_nov_87.903% (SPN482) 0.0314732601616916 -3.15377751358791 -3.18525077374961 0.30135249220629 0.60567129208464 0.654090926183966 0.104440019497654 -5.20707775785944 -4.86973698340793 0.916820165350303 1.91837719158156e-07 1.11746890790921e-06 1 1.09149047107227e-06 5.240543843988e-06 FALSE TRUE TRUE Cutibacterium acnes_nov_96.815% (SPN559) -0.277365263857299 -2.75715209845695 -2.47978683459965 0.324024544252941 0.639728375745111 0.687451530152496 -0.856000783819577 -4.30987932221329 -3.60721698306434 0.391997345890154 1.63343657089044e-05 0.000309498831486322 1 9.29369083437665e-05 0.00145144279593586 FALSE TRUE TRUE Duncaniella freteri_nov_91.751% (SPN571) -0.135774846140012 -2.69597371793472 -2.56019887179471 0.328747854902739 0.646765822152259 0.694343451011619 -0.413006029134947 -4.16839236953378 -3.68722261017173 0.67960219644735 3.06755550676764e-05 0.000226715015302149 1 0.000174533330557469 0.0010632152441756 FALSE TRUE TRUE Duncaniella freteri_nov_88.577% (SPN582) -0.142596294680255 -3.02947654684697 -2.88688025216671 0.379221000625358 0.72130333809686 0.767361897390565 -0.376024256159616 -4.20000350315882 -3.76208443758235 0.706898863320753 2.66910850609948e-05 0.000168503136468604 1 0.000151863070174626 0.000790221605507937 FALSE TRUE TRUE Bosea eneae_vestrisii (SPP12) -0.177230074986878 0.7211172265965 0.898347301583378 0.314082167367755 0.624857114541758 0.672886713467197 -0.564279330062572 1.15405139801494 1.33506470495523 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus capitis_epidermidis (SPP15) -0.0628943762464495 1.23957670923299 1.30247108547944 0.36256592459402 0.696803335421453 0.74335307794092 -0.173470180124828 1.77894772630967 1.75215671277944 1 1 1 1 1 1 FALSE FALSE FALSE Escherichia_Shigella albertii_sonnei (SPP19) 0.685661360952389 2.34191801874311 1.65625665779073 0.442039641940085 0.813402745558675 0.857730316515633 1.5511309301199 2.87916168408627 1.93097600247937 0.120870310248246 0.00398733854176776 0.053486020160076 0.445969765398702 0.0226865813583338 0.250830991095529 FALSE TRUE FALSE Burkholderia_Caenibaculum aenigmatica_baiyandianus_cepacia_contaminans_diffu ...(8 species) (SPP24) -0.0182426895108655 1.04215590478781 1.06039859429867 0.307662056745912 0.615204358908808 0.663431247257651 -0.0592945704901516 1.69399954616103 1.59835491421593 1 1 1 1 1 1 FALSE FALSE FALSE Burkholderia aenigmatica_cepacia_contaminans_lata_multivorans (SPP33) -0.0507881230992455 1.15921417157774 1.21000229467699 0.330494002394247 0.649363596154182 0.696887482636673 -0.15367335785616 1.7851542316864 1.73629506172064 1 1 1 1 1 1 FALSE FALSE FALSE Bacillus halotolerans_spizizenii (SPP44) 0.297187850457236 0.884584476514687 0.587396626057451 0.364726789286084 0.699985791631651 0.746471140807427 0.814823202427636 1.26371775983158 0.786897970927701 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus argenteus_aureus_roterodami (SPP49) 0.128566047492021 0.557747848269179 0.429181800777158 0.341329203393861 0.665442767859815 0.712634343853605 0.37666289966894 0.83816050787207 0.602246866824206 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus mitis_pneumoniae_pseudopneumoniae (SPP52) 0.232697438434995 1.55292078284355 1.32022334440855 0.321642480148474 0.636172978308043 0.683969573040695 0.723466124025593 2.44103543500649 1.93023695270433 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus saprophyticus_xylosus (SPP57) -0.211859689367843 -5.54816991868204 -5.33631022931419 0.492408283911788 0.887208720678031 0.930295706930087 -0.430252082042138 -6.25351147860896 -5.73614409865833 0.66701227979652 4.0132505260972e-10 9.68562645746878e-09 1 2.28340116140013e-09 4.54222482143363e-08 FALSE TRUE TRUE Agrobacterium_Rhizobium lusitanum_rhizogenes (SPP62) -0.0686267826801314 0.54331911441986 0.611945897099991 0.36256270505931 0.696798592818841 0.743348431419786 -0.189282520575041 0.779736239451787 0.823228880608765 1 1 1 1 1 1 FALSE FALSE FALSE Burkholderia contaminans_lata_multivorans (SPP64) -0.47505017942479 2.94057542715562 3.41562560658041 0.537252086025019 0.953011103754579 0.995098838062541 -0.884222121759556 3.08556260842149 3.4324485929766 0.376576318819058 0.00203167445990733 0.00059815726795736 1 0.00952785263956541 0.00340330859355049 FALSE TRUE TRUE