QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Actinomyces graevenitzii (SP11) 399
Actinomyces lingnae_[NVP] (SP32) 398
Actinomyces sp._oral_taxon_172 (SP214) 398
Prevotella histicola (SP224) 397
Fusobacterium nucleatum_subsp._vincentii (SP74) 396
Streptococcus parasanguinis_I (SP327) 394
Fretibacterium sp._oral_taxon_360 (SP202) 391
Rothia mucilaginosa (SP504) 384
Veillonella atypica (SP55) 384
Streptococcus salivarius (SP49) 384
Fretibacterium fastidiosum (SP171) 383
Streptococcus sp._oral_taxon_431 (SP109) 383
Granulicatella adiacens (SP1) 381
Gemella sanguinis (SP70) 380
Streptococcus sp._oral_taxon_057 (SP165) 380
Fretibacterium sp._oral_taxon_359 (SP212) 380
Veillonella multispecies_spp50_2 (SPP50) 380
Prevotella sp._oral_taxon_313 (SP268) 379
Streptococcus multispecies_spp61_2 (SPP61) 379
Actinomyces odontolyticus (SP145) 379
Prevotella melaninogenica (SP132) 379
Ruminococcaceae_[G-2] sp._oral_taxon_085 (SP100) 378
Atopobium parvulum (SP318) 378
Prevotella pallens (SP290) 378
TM7_[G-1] sp._oral_taxon_352 (SP85) 376
Campylobacter gracilis (SP364) 376
Arthrobacter pityocampae_nov_90.779% (SPN1043) 375
Oribacterium asaccharolyticum (SP311) 375
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP407) 375
Haemophilus parainfluenzae (SP178) 375
Prevotella nanceiensis (SP510) 374
Streptococcus infantis (SP34) 374
Streptococcus sp._oral_taxon_074 (SP333) 374
Alloprevotella sp._oral_taxon_308 (SP163) 374
Oribacterium sinus (SP92) 374
Streptococcus parasanguinis_II (SP189) 373
Leptotrichia sp._oral_taxon_215 (SP67) 373
Mogibacterium diversum (SP293) 373
Solobacterium moorei (SP155) 371
Prevotella salivae (SP7) 371
Neisseria flavescens|subflava (SP140) 371
Megasphaera micronuciformis (SP198) 371
Lachnoanaerobaculum orale (SP87) 371
Streptococcus parasanguinis_II_nov_97.992% (SPN2086) 370
Streptococcus australis (SP73) 370
Actinomyces multispecies_spp16_2 (SPP16) 370
Fusobacterium periodonticum (SP133) 368
Prevotella sp._oral_taxon_306 (SP14) 368
Streptococcus peroris (SP344) 368
Porphyromonas sp._oral_taxon_279 (SP4) 368
Prevotella sp._oral_taxon_314 (SP94) 368
Parvimonas sp._oral_taxon_393_nov_97.077% (SPN2295) 368
Streptococcus multispecies_spp44_2 (SPP44) 368
Streptococcus sp._oral_taxon_061 (SP57) 367
Stomatobaculum sp._oral_taxon_097 (SP17) 367
Streptococcus sp._oral_taxon_066 (SP277) 366
Desulfobulbus sp._oral_taxon_041 (SP282) 366
Lachnospiraceae_[G-2] sp._oral_taxon_096 (SP207) 366
Actinomyces sp._oral_taxon_525 (SP12) 366
TM7_[G-6] sp._oral_taxon_870 (SP273) 365
Actinomyces sp._oral_taxon_180_nov_97.942% (SPN3153) 365
Streptococcus multispecies_sppn269_2_nov_97.992% (SPPN269) 365
TM7_[G-3] sp._oral_taxon_351 (SP38) 364
Leptotrichia sp._oral_taxon_221 (SP160) 364
Bacteroidales_[G-2] sp._oral_taxon_274 (SP247) 363
Tannerella forsythia (SP139) 363
Treponema socranskii (SP93) 361
SR1_[G-1] sp._oral_taxon_875 (SP288) 357
Streptococcus intermedius (SP3) 357
Propionibacterium acidifaciens (SP427) 356
Lachnoanaerobaculum umeaense (SP126) 354
Actinomyces sp._oral_taxon_180 (SP33) 354
Gemella haemolysans (SP164) 354
Campylobacter concisus (SP316) 351
Stomatobaculum longum (SP95) 350
Lactobacillus sp._Oral_Taxon_B73 (SP598) 350
Veillonella parvula_group (SP58) 350
Alloprevotella sp._oral_taxon_914 (SP359) 348
Actinomyces israelii (SP362) 348
Leptotrichia sp._oral_taxon_417 (SP108) 347
Streptococcus vestibularis (SP48) 347
Lactobacillus gasseri (SP550) 345
Enterococcus sp._Oral_Taxon_A78 (SP786) 345
Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_369 (SP180) 343
Parvimonas micra (SP26) 342
Treponema sp._oral_taxon_237 (SP183) 340
Enterococcus italicus (SP609) 339
Lactobacillus ultunensis (SP508) 339
Haemophilus sputorum (SP301) 338
Fusobacterium nucleatum_subsp._animalis (SP105) 336
Leptotrichia sp._oral_taxon_218 (SP46) 335
Fusobacterium multispecies_spp71_2 (SPP71) 335
Treponema denticola (SP325) 335
Treponema lecithinolyticum (SP233) 334
Cryptobacterium curtum (SP294) 333
Veillonella sp._oral_taxon_917 (SP18) 331
Atopobium sp._oral_taxon_416 (SP503) 330
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP545) 326
Alkalibacterium pelagium (SP255) 325
Porphyromonas gingivalis (SP400) 325
Fusobacterium sp._HOT_204 (SP6) 324
Selenomonas sputigena (SP82) 324
Actinomyces sp._Oral_Taxon_C55_nov_97.183% (SPN2865) 324
Filifactor alocis (SP99) 323
TM7_[G-1] sp._oral_taxon_346 (SP143) 323
Bacillus sp._Oral_Taxon_C44_nov_96.951% (SPN2654) 322
Lactobacillus crispatus (SP425) 321
Prevotella intermedia (SP228) 318
Selenomonas sp._oral_taxon_136 (SP266) 315
TM7_[G-1] sp._oral_taxon_349 (SP152) 306
Prevotella pleuritidis (SP358) 304
Treponema maltophilum (SP27) 302
Enterococcus faecalis (SP582) 300
Lactobacillus salivarius (SP184) 299
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Saliva_Periodontitis Saliva_Periodontitis Saliva_Periodontitis Saliva_Periodontitis Saliva_Periodontitis
Actinomyces graevenitzii (SP11) 1.0 1.0 1.0 13.5 493.0 19.0 143.0 494.0 909.0 7576.0
Actinomyces lingnae_[NVP] (SP32) 1.0 1.0 1.0 26.0 810.0 20.0 206.0 434.0 672.0 6506.0
Actinomyces sp._oral_taxon_172 (SP214) 1.0 1.0 1.0 17.0 852.0 1.0 79.0 383.0 1143.0 9291.0
Prevotella histicola (SP224) 1.0 1.0 1.0 21.0 5705.0 1.0 77.0 474.0 1250.0 12320.0
Fusobacterium nucleatum_subsp._vincentii (SP74) 83.0 670.5 2240.0 7577.0 39261.0 1.0 37.0 115.0 255.0 1324.0
Streptococcus parasanguinis_I (SP327) 1.0 1.0 5.0 21.5 740.0 11.0 161.0 472.0 701.0 5608.0
Fretibacterium sp._oral_taxon_360 (SP202) 1.0 44.0 201.0 681.5 5263.0 1.0 1.0 9.0 21.0 478.0
Rothia mucilaginosa (SP504) 11.0 66.5 132.0 325.0 22058.0 468.0 3360.0 5290.0 8462.0 26252.0
Veillonella atypica (SP55) 1.0 9.0 27.0 73.5 804.0 29.0 492.0 902.0 1504.0 9150.0
Streptococcus salivarius (SP49) 1.0 1.0 26.0 74.5 1907.0 37.0 245.0 898.0 2769.0 22408.0
Fretibacterium fastidiosum (SP171) 8.0 47.5 174.0 695.0 5234.0 1.0 1.0 10.0 28.0 490.0
Streptococcus sp._oral_taxon_431 (SP109) 1.0 1.0 19.0 58.5 776.0 17.0 303.0 677.0 1297.0 6169.0
Granulicatella adiacens (SP1) 14.0 156.0 361.0 913.5 7155.0 133.0 1287.0 1946.0 3084.0 7993.0
Gemella sanguinis (SP70) 1.0 9.5 24.0 92.0 1746.0 43.0 437.0 1042.0 1980.0 5693.0
Streptococcus sp._oral_taxon_057 (SP165) 1.0 1.0 1.0 6.0 329.0 1.0 38.0 135.0 292.0 1995.0
Fretibacterium sp._oral_taxon_359 (SP212) 1.0 18.0 40.0 222.0 2877.0 1.0 1.0 1.0 11.0 135.0
Veillonella multispecies_spp50_2 (SPP50) 1.0 1.0 1.0 32.0 1259.0 1.0 84.0 322.0 838.0 3676.0
Prevotella sp._oral_taxon_313 (SP268) 1.0 1.0 1.0 8.5 521.0 1.0 33.0 152.0 422.0 9616.0
Streptococcus multispecies_spp61_2 (SPP61) 1.0 43.0 80.0 299.0 13437.0 210.0 1532.0 3312.0 7363.0 28556.0
Actinomyces odontolyticus (SP145) 1.0 23.0 65.0 166.0 3433.0 59.0 864.0 1692.0 2479.0 14482.0
Prevotella melaninogenica (SP132) 1.0 22.0 53.0 177.0 2813.0 45.0 691.0 1968.0 4145.0 16261.0
Ruminococcaceae_[G-2] sp._oral_taxon_085 (SP100) 1.0 1.0 1.0 4.5 65.0 1.0 6.0 16.0 45.0 298.0
Atopobium parvulum (SP318) 1.0 11.0 24.0 61.5 1488.0 10.0 154.0 277.0 483.0 3736.0
Prevotella pallens (SP290) 1.0 1.0 1.0 15.0 692.0 1.0 35.0 202.0 558.0 2345.0
TM7_[G-1] sp._oral_taxon_352 (SP85) 1.0 1.0 1.0 1.0 57.0 1.0 8.0 32.0 72.0 706.0
Campylobacter gracilis (SP364) 13.0 82.0 205.0 451.0 2456.0 1.0 6.0 11.0 22.0 320.0
Arthrobacter pityocampae_nov_90.779% (SPN1043) 1.0 1.0 1.0 1.0 71.0 1.0 1.0 9.0 32.0 147.0
Oribacterium asaccharolyticum (SP311) 1.0 1.0 1.0 1.0 58.0 1.0 7.0 30.0 60.0 285.0
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP407) 1.0 1.0 1.0 1.0 202.0 1.0 1.0 23.0 100.0 618.0
Haemophilus parainfluenzae (SP178) 5.0 30.0 98.0 455.5 11544.0 11.0 226.0 643.0 1884.0 10165.0
Prevotella nanceiensis (SP510) 1.0 1.0 1.0 6.0 340.0 1.0 6.0 28.0 99.0 1472.0
Streptococcus infantis (SP34) 1.0 16.5 40.0 126.0 4974.0 1.0 450.0 1393.0 2456.0 12034.0
Streptococcus sp._oral_taxon_074 (SP333) 1.0 1.0 1.0 11.5 1077.0 1.0 25.0 153.0 517.0 3399.0
Alloprevotella sp._oral_taxon_308 (SP163) 1.0 1.0 1.0 10.0 170.0 1.0 14.0 48.0 137.0 3337.0
Oribacterium sinus (SP92) 1.0 1.0 8.0 24.5 217.0 1.0 101.0 169.0 269.0 881.0
Streptococcus parasanguinis_II (SP189) 1.0 45.5 127.0 371.5 7628.0 109.0 1820.0 3802.0 6051.0 26954.0
Leptotrichia sp._oral_taxon_215 (SP67) 1.0 2.5 19.0 64.0 780.0 1.0 36.0 116.0 271.0 2163.0
Mogibacterium diversum (SP293) 1.0 1.0 18.0 52.0 507.0 1.0 54.0 116.0 249.0 947.0
Solobacterium moorei (SP155) 1.0 11.0 31.0 90.5 617.0 1.0 58.0 109.0 231.0 1554.0
Prevotella salivae (SP7) 1.0 1.0 8.0 24.0 2067.0 7.0 60.0 130.0 246.0 1330.0
Neisseria flavescens|subflava (SP140) 1.0 11.5 30.0 128.5 20004.0 8.0 65.0 313.0 1615.0 14687.0
Megasphaera micronuciformis (SP198) 1.0 1.0 7.0 19.5 1830.0 1.0 55.0 188.0 294.0 1569.0
Lachnoanaerobaculum orale (SP87) 1.0 1.0 1.0 1.0 133.0 1.0 8.0 39.0 89.0 731.0
Streptococcus parasanguinis_II_nov_97.992% (SPN2086) 1.0 1.0 1.0 1.0 903.0 1.0 6.0 13.0 34.0 3710.0
Streptococcus australis (SP73) 1.0 1.0 12.0 85.5 3735.0 1.0 63.0 240.0 1430.0 12140.0
Actinomyces multispecies_spp16_2 (SPP16) 1.0 1.0 1.0 1.0 76.0 1.0 2.0 10.0 36.0 993.0
Fusobacterium periodonticum (SP133) 1.0 1.0 37.0 155.0 1926.0 1.0 91.0 422.0 1189.0 7259.0
Prevotella sp._oral_taxon_306 (SP14) 1.0 1.0 1.0 1.0 143.0 1.0 4.0 23.0 169.0 2324.0
Streptococcus peroris (SP344) 1.0 1.0 1.0 1.0 56.0 1.0 1.0 9.0 27.0 4045.0
Porphyromonas sp._oral_taxon_279 (SP4) 1.0 4.5 21.0 94.5 3456.0 1.0 30.0 189.0 644.0 5293.0
Prevotella sp._oral_taxon_314 (SP94) 1.0 1.0 4.0 49.5 2545.0 1.0 38.0 110.0 242.0 1167.0
Parvimonas sp._oral_taxon_393_nov_97.077% (SPN2295) 1.0 1.0 1.0 1.0 233.0 1.0 1.0 10.0 99.0 3127.0
Streptococcus multispecies_spp44_2 (SPP44) 1.0 1.0 1.0 10.0 1145.0 1.0 22.0 44.0 113.0 7774.0
Streptococcus sp._oral_taxon_061 (SP57) 1.0 1.0 1.0 9.0 764.0 1.0 15.0 45.0 288.0 3392.0
Stomatobaculum sp._oral_taxon_097 (SP17) 1.0 1.0 1.0 13.5 783.0 1.0 5.0 55.0 169.0 742.0
Streptococcus sp._oral_taxon_066 (SP277) 1.0 1.0 11.0 40.5 7102.0 1.0 36.0 155.0 694.0 26499.0
Desulfobulbus sp._oral_taxon_041 (SP282) 1.0 14.0 29.0 200.5 7970.0 1.0 1.0 1.0 10.0 146.0
Lachnospiraceae_[G-2] sp._oral_taxon_096 (SP207) 1.0 1.0 1.0 5.5 737.0 1.0 1.0 9.0 37.0 3352.0
Actinomyces sp._oral_taxon_525 (SP12) 1.0 102.0 265.0 732.5 6798.0 1.0 7.0 23.0 63.0 823.0
TM7_[G-6] sp._oral_taxon_870 (SP273) 1.0 1.0 1.0 3.0 144.0 1.0 1.0 6.0 17.0 507.0
Actinomyces sp._oral_taxon_180_nov_97.942% (SPN3153) 1.0 1.0 1.0 1.0 63.0 1.0 1.0 1.0 19.0 1131.0
Streptococcus multispecies_sppn269_2_nov_97.992% (SPPN269) 1.0 1.0 1.0 12.5 988.0 1.0 15.0 50.0 347.0 4028.0
TM7_[G-3] sp._oral_taxon_351 (SP38) 1.0 1.0 1.0 13.0 288.0 1.0 7.0 18.0 40.0 136.0
Leptotrichia sp._oral_taxon_221 (SP160) 1.0 1.0 1.0 2.0 259.0 1.0 1.0 8.0 57.0 1278.0
Bacteroidales_[G-2] sp._oral_taxon_274 (SP247) 7.0 29.5 89.0 498.0 8346.0 1.0 3.0 11.0 27.0 235.0
Tannerella forsythia (SP139) 10.0 42.5 123.0 516.0 10875.0 1.0 4.0 14.0 29.0 224.0
Treponema socranskii (SP93) 1.0 22.5 122.0 322.0 2034.0 1.0 1.0 6.0 16.0 222.0
SR1_[G-1] sp._oral_taxon_875 (SP288) 1.0 1.0 1.0 1.0 67.0 1.0 1.0 1.0 7.0 1895.0
Streptococcus intermedius (SP3) 1.0 45.0 152.0 702.0 17008.0 1.0 6.0 19.0 37.0 429.0
Propionibacterium acidifaciens (SP427) 1.0 1.0 1.0 3.0 600.0 1.0 1.0 5.0 15.0 340.0
Lachnoanaerobaculum umeaense (SP126) 1.0 1.0 12.0 43.5 515.0 1.0 13.0 39.0 92.0 496.0
Actinomyces sp._oral_taxon_180 (SP33) 1.0 66.0 150.0 438.0 4456.0 9.0 144.0 354.0 1098.0 9441.0
Gemella haemolysans (SP164) 1.0 23.0 69.0 255.5 5677.0 1.0 77.0 175.0 305.0 1497.0
Campylobacter concisus (SP316) 1.0 10.0 29.0 70.5 1511.0 1.0 28.0 47.0 93.0 381.0
Stomatobaculum longum (SP95) 1.0 1.0 12.0 35.5 375.0 1.0 12.0 42.0 109.0 437.0
Lactobacillus sp._Oral_Taxon_B73 (SP598) 1.0 1.0 1.0 1.0 85.0 1.0 1.0 1.0 3.0 7736.0
Veillonella parvula_group (SP58) 159.0 741.0 1711.0 3206.0 20351.0 543.0 2087.0 3264.0 4541.0 9427.0
Alloprevotella sp._oral_taxon_914 (SP359) 1.0 1.0 1.0 1.0 63.0 1.0 1.0 1.0 8.0 681.0
Actinomyces israelii (SP362) 1.0 56.0 277.0 664.5 4145.0 1.0 7.0 25.0 64.0 4042.0
Leptotrichia sp._oral_taxon_417 (SP108) 1.0 1.0 20.0 67.0 3850.0 1.0 19.0 67.0 196.0 5748.0
Streptococcus vestibularis (SP48) 1.0 1.0 31.0 165.0 5129.0 1.0 35.0 203.0 770.0 5767.0
Lactobacillus gasseri (SP550) 1.0 1.0 1.0 3.0 374.0 1.0 1.0 5.0 13.0 3044.0
Enterococcus sp._Oral_Taxon_A78 (SP786) 1.0 2.5 10.0 56.0 1635.0 1.0 1.0 1.0 1.0 5.0
Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_369 (SP180) 1.0 12.0 35.0 160.0 2663.0 1.0 1.0 1.0 13.0 123.0
Parvimonas micra (SP26) 54.0 281.0 687.0 2527.5 15759.0 1.0 46.0 96.0 178.0 3265.0
Treponema sp._oral_taxon_237 (SP183) 1.0 9.0 77.0 295.5 2919.0 1.0 1.0 2.0 14.0 403.0
Enterococcus italicus (SP609) 1.0 4.0 9.0 25.5 1524.0 1.0 1.0 1.0 1.0 1.0
Lactobacillus ultunensis (SP508) 1.0 1.0 1.0 1.0 1615.0 1.0 1.0 1.0 1.0 217.0
Haemophilus sputorum (SP301) 1.0 1.0 1.0 1.0 131.0 1.0 1.0 1.0 11.0 223.0
Fusobacterium nucleatum_subsp._animalis (SP105) 24.0 165.0 586.0 1547.0 8089.0 1.0 32.0 62.0 165.0 952.0
Leptotrichia sp._oral_taxon_218 (SP46) 1.0 1.0 1.0 1.0 42.0 1.0 1.0 1.0 4.0 5336.0
Fusobacterium multispecies_spp71_2 (SPP71) 1.0 1.0 29.0 193.0 9378.0 1.0 1.0 1.0 4.0 136.0
Treponema denticola (SP325) 1.0 13.0 57.0 258.0 4653.0 1.0 1.0 6.0 17.0 491.0
Treponema lecithinolyticum (SP233) 1.0 6.0 23.0 114.5 1337.0 1.0 1.0 1.0 6.0 144.0
Cryptobacterium curtum (SP294) 1.0 1.0 1.0 3.5 347.0 1.0 1.0 5.0 12.0 245.0
Veillonella sp._oral_taxon_917 (SP18) 1.0 1.0 1.0 1.0 8.0 1.0 1.0 1.0 1.0 569.0
Atopobium sp._oral_taxon_416 (SP503) 1.0 1.0 1.0 1.0 813.0 1.0 1.0 1.0 5.0 1274.0
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP545) 5.0 33.0 136.0 554.5 4427.0 1.0 9.0 18.0 36.0 525.0
Alkalibacterium pelagium (SP255) 1.0 1.0 8.0 37.5 1351.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas gingivalis (SP400) 19.0 119.5 203.0 2270.5 33448.0 1.0 8.0 39.0 222.0 7652.0
Fusobacterium sp._HOT_204 (SP6) 1.0 15.0 47.0 196.0 3724.0 1.0 1.0 6.0 18.0 198.0
Selenomonas sputigena (SP82) 1.0 34.0 112.0 438.5 3818.0 1.0 5.0 13.0 37.0 896.0
Actinomyces sp._Oral_Taxon_C55_nov_97.183% (SPN2865) 1.0 1.0 9.0 37.0 594.0 1.0 1.0 1.0 1.0 1.0
Filifactor alocis (SP99) 6.0 45.0 239.0 945.0 5963.0 1.0 9.0 35.0 85.0 868.0
TM7_[G-1] sp._oral_taxon_346 (SP143) 1.0 45.5 144.0 434.5 2867.0 1.0 8.0 18.0 46.0 701.0
Bacillus sp._Oral_Taxon_C44_nov_96.951% (SPN2654) 1.0 1.0 9.0 31.5 2329.0 1.0 1.0 1.0 1.0 5.0
Lactobacillus crispatus (SP425) 1.0 1.0 1.0 1.0 1174.0 1.0 1.0 1.0 4.0 5038.0
Prevotella intermedia (SP228) 15.0 55.0 101.0 1591.0 17439.0 1.0 1.0 57.0 205.0 1697.0
Selenomonas sp._oral_taxon_136 (SP266) 1.0 1.0 1.0 6.5 127.0 1.0 1.0 2.0 17.0 182.0
TM7_[G-1] sp._oral_taxon_349 (SP152) 1.0 24.0 117.0 375.0 3666.0 1.0 1.0 15.0 33.0 841.0
Prevotella pleuritidis (SP358) 1.0 18.5 49.0 498.5 8184.0 1.0 1.0 17.0 45.0 275.0
Treponema maltophilum (SP27) 1.0 1.0 14.0 52.0 512.0 1.0 1.0 1.0 1.0 109.0
Enterococcus faecalis (SP582) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 305.0
Lactobacillus salivarius (SP184) 1.0 1.0 1.0 3.0 890.0 1.0 1.0 1.0 9.0 2797.0
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