QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Actinomyces graevenitzii (SP15) 399
Actinomyces sp._oral_taxon_172 (SP45) 398
Actinomyces lingnae_[NVP] (SP195) 398
Prevotella histicola (SP40) 397
Fusobacterium nucleatum_subsp._vincentii (SP33) 396
Streptococcus parasanguinis_I (SP134) 394
Fretibacterium sp._oral_taxon_360 (SP277) 391
Streptococcus salivarius (SP160) 384
Veillonella atypica (SP41) 384
Rothia mucilaginosa (SP308) 384
Fretibacterium fastidiosum (SP88) 383
Streptococcus sp._oral_taxon_431 (SP206) 383
Granulicatella adiacens (SP96) 381
Streptococcus sp._oral_taxon_057 (SP298) 380
Veillonella multispecies_spp16_2 (SPP16) 380
Gemella sanguinis (SP20) 380
Fretibacterium sp._oral_taxon_359 (SP6) 380
Prevotella melaninogenica (SP65) 379
Actinomyces odontolyticus (SP36) 379
Prevotella sp._oral_taxon_313 (SP172) 379
Streptococcus multispecies_spp21_2 (SPP21) 379
Atopobium parvulum (SP112) 378
Prevotella pallens (SP175) 378
Ruminococcaceae_[G-2] sp._oral_taxon_085 (SP297) 378
Campylobacter gracilis (SP155) 376
TM7_[G-1] sp._oral_taxon_352 (SP321) 376
Arthrobacter pityocampae_nov_90.779% (SPN1045) 375
Haemophilus parainfluenzae (SP23) 375
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP171) 375
Oribacterium asaccharolyticum (SP59) 375
Alloprevotella sp._oral_taxon_308 (SP197) 374
Streptococcus sp._oral_taxon_074 (SP495) 374
Prevotella nanceiensis (SP233) 374
Streptococcus infantis (SP208) 374
Oribacterium sinus (SP26) 374
Leptotrichia sp._oral_taxon_215 (SP269) 373
Streptococcus parasanguinis_II (SP83) 373
Mogibacterium diversum (SP271) 373
Neisseria flavescens|subflava (SP215) 371
Megasphaera micronuciformis (SP5) 371
Prevotella salivae (SP11) 371
Lachnoanaerobaculum orale (SP70) 371
Solobacterium moorei (SP164) 371
Streptococcus parasanguinis_II_nov_97.992% (SPN2067) 370
Actinomyces multispecies_spp60_2 (SPP60) 370
Streptococcus australis (SP110) 370
Streptococcus peroris (SP660) 368
Prevotella sp._oral_taxon_314 (SP39) 368
Porphyromonas sp._oral_taxon_279 (SP135) 368
Parvimonas sp._oral_taxon_393_nov_97.077% (SPN2275) 368
Prevotella sp._oral_taxon_306 (SP170) 368
Streptococcus multispecies_spp49_2 (SPP49) 368
Fusobacterium periodonticum (SP139) 368
Streptococcus sp._oral_taxon_061 (SP433) 367
Stomatobaculum sp._oral_taxon_097 (SP191) 367
Actinomyces sp._oral_taxon_525 (SP48) 366
Desulfobulbus sp._oral_taxon_041 (SP239) 366
Streptococcus sp._oral_taxon_066 (SP307) 366
Lachnospiraceae_[G-2] sp._oral_taxon_096 (SP228) 366
Actinomyces sp._oral_taxon_180_nov_97.942% (SPN3135) 365
TM7_[G-6] sp._oral_taxon_870 (SP312) 365
Streptococcus multispecies_sppn273_2_nov_97.992% (SPPN273) 365
TM7_[G-3] sp._oral_taxon_351 (SP542) 364
Leptotrichia sp._oral_taxon_221 (SP103) 364
Bacteroidales_[G-2] sp._oral_taxon_274 (SP124) 363
Tannerella forsythia (SP570) 363
Treponema socranskii (SP25) 361
Streptococcus intermedius (SP412) 357
SR1_[G-1] sp._oral_taxon_875 (SP454) 357
Propionibacterium acidifaciens (SP202) 356
Gemella haemolysans (SP129) 354
Actinomyces sp._oral_taxon_180 (SP147) 354
Lachnoanaerobaculum umeaense (SP156) 354
Campylobacter concisus (SP2) 351
Lactobacillus sp._Oral_Taxon_B73 (SP468) 350
Stomatobaculum longum (SP132) 350
Veillonella parvula_group (SP145) 350
Actinomyces israelii (SP234) 348
Alloprevotella sp._oral_taxon_914 (SP14) 348
Streptococcus vestibularis (SP223) 347
Leptotrichia sp._oral_taxon_417 (SP57) 347
Lactobacillus gasseri (SP416) 345
Enterococcus sp._Oral_Taxon_A78 (SP420) 345
Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_369 (SP333) 343
Parvimonas micra (SP144) 342
Treponema sp._oral_taxon_237 (SP257) 340
Enterococcus italicus (SP834) 339
Lactobacillus ultunensis (SP498) 339
Haemophilus sputorum (SP348) 338
Fusobacterium nucleatum_subsp._animalis (SP100) 336
Fusobacterium multispecies_spp55_2 (SPP55) 335
Treponema denticola (SP201) 335
Leptotrichia sp._oral_taxon_218 (SP310) 335
Treponema lecithinolyticum (SP435) 334
Cryptobacterium curtum (SP565) 333
Veillonella sp._oral_taxon_917 (SP199) 331
Atopobium sp._oral_taxon_416 (SP459) 330
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP535) 326
Porphyromonas gingivalis (SP484) 325
Alkalibacterium pelagium (SP55) 325
Actinomyces sp._Oral_Taxon_C55_nov_97.183% (SPN2840) 324
Selenomonas sputigena (SP94) 324
Fusobacterium sp._HOT_204 (SP409) 324
TM7_[G-1] sp._oral_taxon_346 (SP255) 323
Filifactor alocis (SP407) 323
Bacillus sp._Oral_Taxon_C44_nov_96.951% (SPN2637) 322
Lactobacillus crispatus (SP177) 321
Prevotella intermedia (SP182) 318
Selenomonas sp._oral_taxon_136 (SP52) 315
TM7_[G-1] sp._oral_taxon_349 (SP127) 306
Prevotella pleuritidis (SP58) 304
Treponema maltophilum (SP397) 302
Enterococcus faecalis (SP871) 300
Lactobacillus salivarius (SP185) 299
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Plaque_Periodontitis_Shallow Saliva_Periodontitis Saliva_Periodontitis Saliva_Periodontitis Saliva_Periodontitis Saliva_Periodontitis
Actinomyces graevenitzii (SP15) 1.0 1.0 1.0 13.5 493.0 19.0 143.0 494.0 909.0 7576.0
Actinomyces sp._oral_taxon_172 (SP45) 1.0 1.0 1.0 17.0 852.0 1.0 79.0 383.0 1143.0 9291.0
Actinomyces lingnae_[NVP] (SP195) 1.0 1.0 1.0 26.0 810.0 20.0 206.0 434.0 672.0 6506.0
Prevotella histicola (SP40) 1.0 1.0 1.0 21.0 5705.0 1.0 77.0 474.0 1250.0 12320.0
Fusobacterium nucleatum_subsp._vincentii (SP33) 83.0 670.5 2240.0 7577.0 39261.0 1.0 37.0 115.0 255.0 1324.0
Streptococcus parasanguinis_I (SP134) 1.0 1.0 5.0 21.5 740.0 11.0 161.0 472.0 701.0 5608.0
Fretibacterium sp._oral_taxon_360 (SP277) 1.0 44.0 201.0 681.5 5263.0 1.0 1.0 9.0 21.0 478.0
Streptococcus salivarius (SP160) 1.0 1.0 26.0 74.5 1907.0 37.0 245.0 898.0 2769.0 22408.0
Veillonella atypica (SP41) 1.0 9.0 27.0 73.5 804.0 29.0 492.0 902.0 1504.0 9150.0
Rothia mucilaginosa (SP308) 11.0 66.5 132.0 325.0 22058.0 468.0 3360.0 5290.0 8462.0 26252.0
Fretibacterium fastidiosum (SP88) 8.0 47.5 174.0 695.0 5234.0 1.0 1.0 10.0 28.0 490.0
Streptococcus sp._oral_taxon_431 (SP206) 1.0 1.0 19.0 58.5 776.0 17.0 303.0 677.0 1297.0 6169.0
Granulicatella adiacens (SP96) 14.0 156.0 361.0 913.5 7155.0 133.0 1287.0 1946.0 3084.0 7993.0
Streptococcus sp._oral_taxon_057 (SP298) 1.0 1.0 1.0 6.0 329.0 1.0 38.0 135.0 292.0 1995.0
Veillonella multispecies_spp16_2 (SPP16) 1.0 1.0 1.0 32.0 1259.0 1.0 84.0 322.0 838.0 3676.0
Gemella sanguinis (SP20) 1.0 9.5 24.0 92.0 1746.0 43.0 437.0 1042.0 1980.0 5693.0
Fretibacterium sp._oral_taxon_359 (SP6) 1.0 18.0 40.0 222.0 2877.0 1.0 1.0 1.0 11.0 135.0
Prevotella melaninogenica (SP65) 1.0 22.0 53.0 177.0 2813.0 45.0 691.0 1968.0 4145.0 16261.0
Actinomyces odontolyticus (SP36) 1.0 23.0 65.0 166.0 3433.0 59.0 864.0 1692.0 2479.0 14482.0
Prevotella sp._oral_taxon_313 (SP172) 1.0 1.0 1.0 8.5 521.0 1.0 33.0 152.0 422.0 9616.0
Streptococcus multispecies_spp21_2 (SPP21) 1.0 43.0 80.0 299.0 13437.0 210.0 1532.0 3312.0 7363.0 28556.0
Atopobium parvulum (SP112) 1.0 11.0 24.0 61.5 1488.0 10.0 154.0 277.0 483.0 3736.0
Prevotella pallens (SP175) 1.0 1.0 1.0 15.0 692.0 1.0 35.0 202.0 558.0 2345.0
Ruminococcaceae_[G-2] sp._oral_taxon_085 (SP297) 1.0 1.0 1.0 4.5 65.0 1.0 6.0 16.0 45.0 298.0
Campylobacter gracilis (SP155) 13.0 82.0 205.0 451.0 2456.0 1.0 6.0 11.0 22.0 320.0
TM7_[G-1] sp._oral_taxon_352 (SP321) 1.0 1.0 1.0 1.0 57.0 1.0 8.0 32.0 72.0 706.0
Arthrobacter pityocampae_nov_90.779% (SPN1045) 1.0 1.0 1.0 1.0 71.0 1.0 1.0 9.0 32.0 147.0
Haemophilus parainfluenzae (SP23) 5.0 30.0 98.0 455.5 11544.0 11.0 226.0 643.0 1884.0 10165.0
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP171) 1.0 1.0 1.0 1.0 202.0 1.0 1.0 23.0 100.0 618.0
Oribacterium asaccharolyticum (SP59) 1.0 1.0 1.0 1.0 58.0 1.0 7.0 30.0 60.0 285.0
Alloprevotella sp._oral_taxon_308 (SP197) 1.0 1.0 1.0 10.0 170.0 1.0 14.0 48.0 137.0 3337.0
Streptococcus sp._oral_taxon_074 (SP495) 1.0 1.0 1.0 11.5 1077.0 1.0 25.0 153.0 517.0 3399.0
Prevotella nanceiensis (SP233) 1.0 1.0 1.0 6.0 340.0 1.0 6.0 28.0 99.0 1472.0
Streptococcus infantis (SP208) 1.0 16.5 40.0 126.0 4974.0 1.0 450.0 1393.0 2456.0 12034.0
Oribacterium sinus (SP26) 1.0 1.0 8.0 24.5 217.0 1.0 101.0 169.0 269.0 881.0
Leptotrichia sp._oral_taxon_215 (SP269) 1.0 2.5 19.0 64.0 780.0 1.0 36.0 116.0 271.0 2163.0
Streptococcus parasanguinis_II (SP83) 1.0 45.5 127.0 371.5 7628.0 109.0 1820.0 3802.0 6051.0 26954.0
Mogibacterium diversum (SP271) 1.0 1.0 18.0 52.0 507.0 1.0 54.0 116.0 249.0 947.0
Neisseria flavescens|subflava (SP215) 1.0 11.5 30.0 128.5 20004.0 8.0 65.0 313.0 1615.0 14687.0
Megasphaera micronuciformis (SP5) 1.0 1.0 7.0 19.5 1830.0 1.0 55.0 188.0 294.0 1569.0
Prevotella salivae (SP11) 1.0 1.0 8.0 24.0 2067.0 7.0 60.0 130.0 246.0 1330.0
Lachnoanaerobaculum orale (SP70) 1.0 1.0 1.0 1.0 133.0 1.0 8.0 39.0 89.0 731.0
Solobacterium moorei (SP164) 1.0 11.0 31.0 90.5 617.0 1.0 58.0 109.0 231.0 1554.0
Streptococcus parasanguinis_II_nov_97.992% (SPN2067) 1.0 1.0 1.0 1.0 903.0 1.0 6.0 13.0 34.0 3710.0
Actinomyces multispecies_spp60_2 (SPP60) 1.0 1.0 1.0 1.0 76.0 1.0 2.0 10.0 36.0 993.0
Streptococcus australis (SP110) 1.0 1.0 12.0 85.5 3735.0 1.0 63.0 240.0 1430.0 12140.0
Streptococcus peroris (SP660) 1.0 1.0 1.0 1.0 56.0 1.0 1.0 9.0 27.0 4045.0
Prevotella sp._oral_taxon_314 (SP39) 1.0 1.0 4.0 49.5 2545.0 1.0 38.0 110.0 242.0 1167.0
Porphyromonas sp._oral_taxon_279 (SP135) 1.0 4.5 21.0 94.5 3456.0 1.0 30.0 189.0 644.0 5293.0
Parvimonas sp._oral_taxon_393_nov_97.077% (SPN2275) 1.0 1.0 1.0 1.0 233.0 1.0 1.0 10.0 99.0 3127.0
Prevotella sp._oral_taxon_306 (SP170) 1.0 1.0 1.0 1.0 143.0 1.0 4.0 23.0 169.0 2324.0
Streptococcus multispecies_spp49_2 (SPP49) 1.0 1.0 1.0 10.0 1145.0 1.0 22.0 44.0 113.0 7774.0
Fusobacterium periodonticum (SP139) 1.0 1.0 37.0 155.0 1926.0 1.0 91.0 422.0 1189.0 7259.0
Streptococcus sp._oral_taxon_061 (SP433) 1.0 1.0 1.0 9.0 764.0 1.0 15.0 45.0 288.0 3392.0
Stomatobaculum sp._oral_taxon_097 (SP191) 1.0 1.0 1.0 13.5 783.0 1.0 5.0 55.0 169.0 742.0
Actinomyces sp._oral_taxon_525 (SP48) 1.0 102.0 265.0 732.5 6798.0 1.0 7.0 23.0 63.0 823.0
Desulfobulbus sp._oral_taxon_041 (SP239) 1.0 14.0 29.0 200.5 7970.0 1.0 1.0 1.0 10.0 146.0
Streptococcus sp._oral_taxon_066 (SP307) 1.0 1.0 11.0 40.5 7102.0 1.0 36.0 155.0 694.0 26499.0
Lachnospiraceae_[G-2] sp._oral_taxon_096 (SP228) 1.0 1.0 1.0 5.5 737.0 1.0 1.0 9.0 37.0 3352.0
Actinomyces sp._oral_taxon_180_nov_97.942% (SPN3135) 1.0 1.0 1.0 1.0 63.0 1.0 1.0 1.0 19.0 1131.0
TM7_[G-6] sp._oral_taxon_870 (SP312) 1.0 1.0 1.0 3.0 144.0 1.0 1.0 6.0 17.0 507.0
Streptococcus multispecies_sppn273_2_nov_97.992% (SPPN273) 1.0 1.0 1.0 12.5 988.0 1.0 15.0 50.0 347.0 4028.0
TM7_[G-3] sp._oral_taxon_351 (SP542) 1.0 1.0 1.0 13.0 288.0 1.0 7.0 18.0 40.0 136.0
Leptotrichia sp._oral_taxon_221 (SP103) 1.0 1.0 1.0 2.0 259.0 1.0 1.0 8.0 57.0 1278.0
Bacteroidales_[G-2] sp._oral_taxon_274 (SP124) 7.0 29.5 89.0 498.0 8346.0 1.0 3.0 11.0 27.0 235.0
Tannerella forsythia (SP570) 10.0 42.5 123.0 516.0 10875.0 1.0 4.0 14.0 29.0 224.0
Treponema socranskii (SP25) 1.0 22.5 122.0 322.0 2034.0 1.0 1.0 6.0 16.0 222.0
Streptococcus intermedius (SP412) 1.0 45.0 152.0 702.0 17008.0 1.0 6.0 19.0 37.0 429.0
SR1_[G-1] sp._oral_taxon_875 (SP454) 1.0 1.0 1.0 1.0 67.0 1.0 1.0 1.0 7.0 1895.0
Propionibacterium acidifaciens (SP202) 1.0 1.0 1.0 3.0 600.0 1.0 1.0 5.0 15.0 340.0
Gemella haemolysans (SP129) 1.0 23.0 69.0 255.5 5677.0 1.0 77.0 175.0 305.0 1497.0
Actinomyces sp._oral_taxon_180 (SP147) 1.0 66.0 150.0 438.0 4456.0 9.0 144.0 354.0 1098.0 9441.0
Lachnoanaerobaculum umeaense (SP156) 1.0 1.0 12.0 43.5 515.0 1.0 13.0 39.0 92.0 496.0
Campylobacter concisus (SP2) 1.0 10.0 29.0 70.5 1511.0 1.0 28.0 47.0 93.0 381.0
Lactobacillus sp._Oral_Taxon_B73 (SP468) 1.0 1.0 1.0 1.0 85.0 1.0 1.0 1.0 3.0 7736.0
Stomatobaculum longum (SP132) 1.0 1.0 12.0 35.5 375.0 1.0 12.0 42.0 109.0 437.0
Veillonella parvula_group (SP145) 159.0 741.0 1711.0 3206.0 20351.0 543.0 2087.0 3264.0 4541.0 9427.0
Actinomyces israelii (SP234) 1.0 56.0 277.0 664.5 4145.0 1.0 7.0 25.0 64.0 4042.0
Alloprevotella sp._oral_taxon_914 (SP14) 1.0 1.0 1.0 1.0 63.0 1.0 1.0 1.0 8.0 681.0
Streptococcus vestibularis (SP223) 1.0 1.0 31.0 165.0 5129.0 1.0 35.0 203.0 770.0 5767.0
Leptotrichia sp._oral_taxon_417 (SP57) 1.0 1.0 20.0 67.0 3850.0 1.0 19.0 67.0 196.0 5748.0
Lactobacillus gasseri (SP416) 1.0 1.0 1.0 3.0 374.0 1.0 1.0 5.0 13.0 3044.0
Enterococcus sp._Oral_Taxon_A78 (SP420) 1.0 2.5 10.0 56.0 1635.0 1.0 1.0 1.0 1.0 5.0
Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_369 (SP333) 1.0 12.0 35.0 160.0 2663.0 1.0 1.0 1.0 13.0 123.0
Parvimonas micra (SP144) 54.0 281.0 687.0 2527.5 15759.0 1.0 46.0 96.0 178.0 3265.0
Treponema sp._oral_taxon_237 (SP257) 1.0 9.0 77.0 295.5 2919.0 1.0 1.0 2.0 14.0 403.0
Enterococcus italicus (SP834) 1.0 4.0 9.0 25.5 1524.0 1.0 1.0 1.0 1.0 1.0
Lactobacillus ultunensis (SP498) 1.0 1.0 1.0 1.0 1615.0 1.0 1.0 1.0 1.0 217.0
Haemophilus sputorum (SP348) 1.0 1.0 1.0 1.0 131.0 1.0 1.0 1.0 11.0 223.0
Fusobacterium nucleatum_subsp._animalis (SP100) 24.0 165.0 586.0 1547.0 8089.0 1.0 32.0 62.0 165.0 952.0
Fusobacterium multispecies_spp55_2 (SPP55) 1.0 1.0 29.0 193.0 9378.0 1.0 1.0 1.0 4.0 136.0
Treponema denticola (SP201) 1.0 13.0 57.0 258.0 4653.0 1.0 1.0 6.0 17.0 491.0
Leptotrichia sp._oral_taxon_218 (SP310) 1.0 1.0 1.0 1.0 42.0 1.0 1.0 1.0 4.0 5336.0
Treponema lecithinolyticum (SP435) 1.0 6.0 23.0 114.5 1337.0 1.0 1.0 1.0 6.0 144.0
Cryptobacterium curtum (SP565) 1.0 1.0 1.0 3.5 347.0 1.0 1.0 5.0 12.0 245.0
Veillonella sp._oral_taxon_917 (SP199) 1.0 1.0 1.0 1.0 8.0 1.0 1.0 1.0 1.0 569.0
Atopobium sp._oral_taxon_416 (SP459) 1.0 1.0 1.0 1.0 813.0 1.0 1.0 1.0 5.0 1274.0
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP535) 5.0 33.0 136.0 554.5 4427.0 1.0 9.0 18.0 36.0 525.0
Porphyromonas gingivalis (SP484) 19.0 119.5 203.0 2270.5 33448.0 1.0 8.0 39.0 222.0 7652.0
Alkalibacterium pelagium (SP55) 1.0 1.0 8.0 37.5 1351.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp._Oral_Taxon_C55_nov_97.183% (SPN2840) 1.0 1.0 9.0 37.0 594.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sputigena (SP94) 1.0 34.0 112.0 438.5 3818.0 1.0 5.0 13.0 37.0 896.0
Fusobacterium sp._HOT_204 (SP409) 1.0 15.0 47.0 196.0 3724.0 1.0 1.0 6.0 18.0 198.0
TM7_[G-1] sp._oral_taxon_346 (SP255) 1.0 45.5 144.0 434.5 2867.0 1.0 8.0 18.0 46.0 701.0
Filifactor alocis (SP407) 6.0 45.0 239.0 945.0 5963.0 1.0 9.0 35.0 85.0 868.0
Bacillus sp._Oral_Taxon_C44_nov_96.951% (SPN2637) 1.0 1.0 9.0 31.5 2329.0 1.0 1.0 1.0 1.0 5.0
Lactobacillus crispatus (SP177) 1.0 1.0 1.0 1.0 1174.0 1.0 1.0 1.0 4.0 5038.0
Prevotella intermedia (SP182) 15.0 55.0 101.0 1591.0 17439.0 1.0 1.0 57.0 205.0 1697.0
Selenomonas sp._oral_taxon_136 (SP52) 1.0 1.0 1.0 6.5 127.0 1.0 1.0 2.0 17.0 182.0
TM7_[G-1] sp._oral_taxon_349 (SP127) 1.0 24.0 117.0 375.0 3666.0 1.0 1.0 15.0 33.0 841.0
Prevotella pleuritidis (SP58) 1.0 18.5 49.0 498.5 8184.0 1.0 1.0 17.0 45.0 275.0
Treponema maltophilum (SP397) 1.0 1.0 14.0 52.0 512.0 1.0 1.0 1.0 1.0 109.0
Enterococcus faecalis (SP871) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 305.0
Lactobacillus salivarius (SP185) 1.0 1.0 1.0 3.0 890.0 1.0 1.0 1.0 9.0 2797.0
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