taxon lfc: HealthyPlaque_inoculum vs. No_loading lfc: Loading vs. No_loading lfc: Loading vs. HealthyPlaque_inoculum se: HealthyPlaque_inoculum vs. No_loading se: Loading vs. No_loading se: Loading vs. HealthyPlaque_inoculum W: HealthyPlaque_inoculum vs. No_loading W: Loading vs. No_loading W: Loading vs. HealthyPlaque_inoculum p: HealthyPlaque_inoculum vs. No_loading p: Loading vs. No_loading p: Loading vs. HealthyPlaque_inoculum q: HealthyPlaque_inoculum vs. No_loading q: Loading vs. No_loading q: Loading vs. HealthyPlaque_inoculum diff: HealthyPlaque_inoculum vs. No_loading diff: Loading vs. No_loading diff: Loading vs. HealthyPlaque_inoculum Veillonella parvula_group (SP1) -4.73233313802353 0.251651804244003 4.98398494226753 0.441389343375986 0.232868978940879 0.453153332998877 -10.7214485556631 1.08065834010417 10.9984514717889 8.07289694041755e-27 0.279849120939565 3.88750222516126e-28 4.17891135739261e-26 1 2.40110431554078e-27 TRUE FALSE TRUE Streptococcus sanguinis (SP10) 0.646827799202957 -2.17366192134053 -2.82048972054349 1.0824997888729 0.623715585928456 1.08918067371013 0.597531570769574 -3.48502101018502 -2.58955175079992 0.550152535360535 0.000492098400192055 0.00961009769301644 1 0.00303943129530387 0.0497463880579675 FALSE TRUE TRUE Streptococcus sp._oral_taxon_058 (SP11) -2.06608152729859 -0.602362557790628 1.46371896950796 1.34138102100243 0.78049093544451 1.34735893572577 -1.54026446993755 -0.77177393155446 1.08636157054877 1 1 1 1 1 1 FALSE FALSE FALSE Actinomyces sp._oral_taxon_180 (SP112) -0.536891997643589 -0.974612719581943 -0.437720721938354 0.776276908057418 0.437763927288938 0.784376306461652 -0.691624331563753 -2.22634314713343 -0.558049393298131 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus australis (SP118) 1.0168311664393 0.0400272491253368 -0.976803917313961 0.290495950815816 0.139922234177254 0.306331290892191 3.5003281924711 0.286067824464768 -3.1887173996134 0.000464685671164242 0.774826174557007 0.00142905508582513 0.00287011738072032 1 0.00739746162074183 TRUE FALSE TRUE Porphyromonas sp._oral_taxon_279 (SP12) -0.44861069860915 -0.408885966587337 0.0397247320218127 1.75076698555238 1.02802846585985 1.75605225369116 -0.256236667878228 -0.397737981161194 0.0226216115940245 1 1 1 1 1 1 FALSE FALSE FALSE Granulicatella adiacens (SP13) -4.87107900336036 -0.838109865302412 4.03296913805795 0.547419206391542 0.298026853801134 0.557565144255245 -8.89826105201782 -2.8121957958247 7.23318015771035 5.6728463998756e-19 0.00492045416522482 4.71812826232729e-13 3.50381689404081e-18 0.0205501321018213 2.44232521814589e-12 TRUE TRUE TRUE Rhizobium loti (SP167) -0.842197055912687 0.216585795255778 1.05878285116847 0.37699691518056 0.193144556872334 0.390146210587142 -2.23396272489212 1.12136629042536 2.71381041885572 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus oralis (SP17) -2.11860019213195 -0.957122534220954 1.161477657911 1.22841042405473 0.712109344425139 1.2346593295243 -1.72466803492182 -1.34406680900053 0.940727235551282 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus sp._oral_taxon_431 (SP196) -1.25825510359485 -0.0493859682321132 1.20886913536274 0.315960495774868 0.155504626861587 0.330876176744477 -3.98231779105512 -0.317585201346267 3.65353936102901 6.82464421514394e-05 0.750799601035287 0.000258650116866866 0.000421522142700067 1 0.00133889472260495 TRUE FALSE TRUE Streptococcus sp._oral_taxon_423 (SP2) -4.59378396787663 -0.137441128222231 4.4563428396544 0.840237047129384 0.476672156698146 0.847957261510751 -5.46724758634602 -0.288334710326423 5.25538614023402 4.57077412250597e-08 0.773090539819542 1.47714216873055e-07 2.82312519331251e-07 1 7.64638299107579e-07 TRUE FALSE TRUE Enterobacter hormaechei (SP21) -2.0198118849082 2.40306700717322 4.42287889208142 1.2588036508538 0.73051074333418 1.2649749512331 -1.60454879801011 3.28957106942083 3.49641618418608 0.108593137224142 0.00100340213272127 0.000471552606951648 0.453536043700828 0.0051940816282042 0.00291253080764253 FALSE TRUE TRUE Streptococcus cristatus (SP22) -1.99239084360217 0.296023436682619 2.28841428028479 1.64041169518598 0.961332766546956 1.64585007652741 -1.21456756828126 0.307930247447942 1.39041478499252 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus tigurinus (SP24) -0.963730607950735 -2.12280550596057 -1.15907489800984 1.10200091188784 0.635535253137774 1.10861757678271 -0.874527958692674 -3.34018529338825 -1.0455137301481 0.381830801139578 0.000837225097045213 0.295785598167326 1 0.0051710961876322 1 FALSE TRUE FALSE Atopobium parvulum (SP241) -0.594099630107363 -0.167621063001517 0.426478567105846 0.406849738500976 0.211572292254044 0.41930742078533 -1.46024336231923 -0.792263775259602 1.0171023596651 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus caprae (SP283) -1.57120136434593 0.00151907242756211 1.57272043677349 0.22612374658458 0.102590572144086 0.244930989962524 -6.94841381357633 0.0148071347670096 6.42107573653349 3.69416074306747e-12 0.988186047485209 1.35314680402521e-10 2.28168751777697e-11 1 7.0045246326011e-10 TRUE FALSE TRUE Propionibacterium acnes (SP285) -0.603371618359914 0.0400272491253369 0.643398867485251 0.310789328223024 0.152329189848968 0.325881694020559 -1.94141678483545 0.262768082499639 1.97433264675696 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus mitis (SP29) 0.228486941197108 -1.29356020550507 -1.52204714670218 0.955032736367989 0.546402782648994 0.962196401781214 0.239245140502773 -2.3674114528367 -1.58184664158437 1 1 1 1 1 1 FALSE FALSE FALSE Campylobacter showae (SP31) 2.29879689670339 1.07971512005142 -1.21908177665197 0.949124518885856 0.542816627725102 0.956313627284482 2.4220182399269 1.98909735793542 -1.274771938693 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus dentisani (SP32) -0.0242097701887471 -1.59451125291902 -1.57030148273027 1.1903717330594 0.689074124956578 1.19672324412405 -0.0203379914999535 -2.31399089759683 -1.31216761305548 1 1 1 1 1 1 FALSE FALSE FALSE Neisseria flava (SP40) -1.40069374390534 -2.0107764855084 -0.610082741603062 1.3235743836112 0.769715238050354 1.32959199239537 -1.05826598130717 -2.61236413949863 -0.458849590771035 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus sp._oral_taxon_066 (SP42) -0.983324018110831 0.233360467927011 1.21668448603784 1.04088158523049 0.598483827399006 1.0477073928439 -0.944703059467702 0.389919421784861 1.16128271533454 1 1 1 1 1 1 FALSE FALSE FALSE Campylobacter concisus (SP53) 0.333228891144848 -0.537029483647427 -0.870258374792275 1.19948274266023 0.694592030800546 1.20580909607772 0.277810492217511 -0.773158141518667 -0.721721520946452 1 1 1 1 1 1 FALSE FALSE FALSE Propionibacterium propionicum (SP55) 1.99332183666842 0.0420724698543768 -1.95124936681405 0.652218454910409 0.362137939657819 0.661256756365118 3.05621808408079 0.116178022921682 -2.95081955387485 0.00224148156774875 0.907511453962194 0.00316932013461692 0.0138444449772717 1 0.0164058924615464 TRUE FALSE TRUE Bacillus anthracis (SP66) -2.02757620462447 1.75111768092052 3.77869388554498 0.847590201457976 0.481142342488175 0.855270380111592 -2.39216569650846 3.63950026070207 4.41812784987591 0.0167492788598677 0.000273167661070682 9.95595256621647e-06 0.0699528705323888 0.00141404436318941 6.14926482031017e-05 FALSE TRUE TRUE Neisseria elongata (SP69) -1.62018483028036 -1.62119798963743 -0.00101315935707791 0.920358099827619 0.525352208275434 0.927675631268903 -1.76038525719914 -3.08592590665854 -0.00109214829292441 0.0783425073102312 0.00202919380160523 0.999128591912203 0.40553768490002 0.012533255833444 1 FALSE TRUE FALSE Methylobacterium sp._Oral_Taxon_B84 (SP70) -2.35277230584332 1.06622564363487 3.41899794947819 0.836561860870557 0.474437699973583 0.844302341359803 -2.81243075484572 2.2473459501516 4.04949481008388 0.00491686088030269 0.0246179263908689 5.1328316085127e-05 0.0254519857333316 0.102816045514805 0.000317027834643431 TRUE FALSE TRUE Burkholderia cepacia (SP71) 0.94976655063253 1.22523618106709 0.275469630434563 0.61626453717898 0.3401705680813 0.625642421198598 1.541166971866 3.60182889418659 0.440298837004725 0.123276153623961 0.000315986325848269 0.659720682946221 0.638135383465208 0.00195168024788637 1 FALSE TRUE FALSE Streptococcus anginosus (SP72) -2.08138971066824 -1.73734003718216 0.344049673486083 0.926337108706857 0.528982672728688 0.933627308475669 -2.24690308863239 -3.28430424425872 0.368508579775599 0.0246462212887376 0.00102234492345289 0.7124940488479 0.127580439612289 0.00631448335073845 1 FALSE TRUE FALSE Acinetobacter septicus (SP75) -1.57120136434593 0.00151907242756211 1.57272043677349 0.22612374658458 0.102590572144086 0.244930989962524 -6.94841381357633 0.0148071347670096 6.42107573653349 3.69416074306747e-12 0.988186047485209 1.35314680402521e-10 2.28168751777697e-11 1 7.0045246326011e-10 TRUE FALSE TRUE Streptococcus sp._oral_taxon_064 (SP8) -2.62659133626611 -0.940419874336238 1.68617146192987 1.1830524025693 0.684641068746829 1.18942439937132 -2.22018173545127 -1.37359547544758 1.41763651630243 1 1 1 1 1 1 FALSE FALSE FALSE Haemophilus parainfluenzae (SP9) 1.67068308412584 1.49799674220011 -0.172686341925736 1.43956252216169 0.839889659646954 1.44533894141151 1.16054916574036 1.78356373958668 -0.11947809401516 1 1 1 1 1 1 FALSE FALSE FALSE Actinomyces odontolyticus (SP91) -2.06301627439845 -0.715115118236774 1.34790115616167 0.863813595671614 0.491003069463202 0.871407783312827 -2.3882655757397 -1.45643716447351 1.54680871800039 1 1 1 1 1 1 FALSE FALSE FALSE Comamonas testosteroni_nov_89.837% (SPN11) -1.17438152581232 0.342065417781604 1.51644694359392 0.634134451914877 0.351092110286934 0.643338960250598 -1.85194405108581 0.974289674302413 2.35715079808507 1 1 1 1 1 1 FALSE FALSE FALSE Granulicatella adiacens_nov_96.400% (SPN34) -2.4122141673099 -0.528156565963762 1.88405760134614 0.414340898756431 0.216193880843254 0.4266391911229 -5.82181043326818 -2.44297647973991 4.41604437789075 5.8213556070026e-09 0.0145666865868506 1.0052345549392e-05 3.59554316903102e-08 0.060837338098023 5.20356710792057e-05 TRUE FALSE TRUE