GroupWeek 0 Inoculum...1 GroupWeek 0 Inoculum...2 GroupWeek 0 Inoculum...3 GroupWeek 0 Inoculum...4 GroupWeek 0 Inoculum...5 GroupWeek 0 Inoculum...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Stomatobaculum longum (SP1) -2.82298239152131 1.09129046180476 -2.58682952919125 0 0 TRUE Tannerella sp._HMT_286 (SP101) 0.277234085355958 1.21640046920404 0.227913497548524 0.819713489327799 1 FALSE Actinomyces oris (SP103) -0.0711933342214955 1.79066185991149 -0.0397581116878285 0.968285971837702 1 FALSE Streptococcus cristatus (SP106) -0.665865594639047 0.464295593797183 -1.434141532969 0.151531877711933 1 FALSE Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP108) 0.849412768019448 0.735384436595971 1.15505948419483 0 0 TRUE Mogibacterium vescum (SP11) 0.923793951790851 0.636470838266284 1.45143170157995 0 0 TRUE Actinomyces naeslundii (SP110) -2.00172317230239 1.21983591900589 -1.64097739795505 0.100802107045744 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP112) 0.984567804055503 0.958096243948861 1.02762933293375 0 0 TRUE Leptotrichia sp._HMT_215 (SP113) -2.50408433242915 1.10279951295516 -2.27066144209565 0 0 TRUE Streptococcus sp._Oral_Taxon_71 (SP115) 0.337116863005775 0.264871498644137 1.27275627891811 0.203104540068765 1 FALSE Capnocytophaga gingivalis (SP117) 3.16000281974812 1.25318240045148 2.52158250755011 0.0116828273955791 0.87621205466843 FALSE Streptococcus peroris (SP12) -0.0973622288399233 0.154534712080419 -0.630034686247429 0.528671890448551 1 FALSE Treponema socranskii (SP121) 0.849412768019448 0.849440736529831 0.999967074206381 0 0 TRUE Neisseria mucosa (SP122) -0.903085689323147 0.703005807926879 -1.28460629932246 0 0 TRUE Actinomyces sp._HMT_171 (SP123) 0.148122859211309 0.147303213491771 1.00556434377845 0.314625183111831 1 FALSE Selenomonas noxia (SP130) 2.75721811953084 1.36479943570039 2.02023685488695 0.0433588251287109 1 FALSE Streptococcus sp._HMT_064 (SP132) -0.024302042530481 0.0587690860182318 -0.413517449002726 0.679227540954601 1 FALSE Leptotrichia sp._HMT_498 (SP133) -0.412505833630888 1.88609517716592 -0.218708917039237 0.826876802354419 1 FALSE Actinomyces dentalis (SP134) 1.97979511662233 2.07831363953617 0.952596893442983 0.340794351834599 1 FALSE Leptotrichia sp._HMT_221 (SP136) 0.630297382883949 0.199575659193655 3.15818765389797 0.00158753330513434 0.125415131105613 FALSE Prevotella loescheii (SP138) 3.23861823909662 1.4857118288691 2.17984280407985 0 0 TRUE Capnocytophaga leadbetteri (SP146) -0.0839164641231847 1.54934710817977 -0.0541624686167148 0.95680572247529 1 FALSE Leptotrichia wadei (SP148) -0.875981827621272 0.373768179102948 -2.34365009274906 0.0190960770936562 1 FALSE Rothia dentocariosa (SP149) -1.77833873057283 1.33997486364906 -1.32714335083122 0.184461267409879 1 FALSE Actinomyces massiliensis (SP15) -0.417966162988967 0.216241923439781 -1.9328636942381 0.0532529913783218 1 FALSE Lautropia mirabilis (SP154) 0.27849114343406 0.243439901014487 1.14398314439623 0.252630627369108 1 FALSE Actinomyces viscosus (SP162) 1.95123981352561 1.44740602903318 1.34809429723667 0.177628055406295 1 FALSE Actinomyces sp._HMT_175 (SP163) -0.816405543308816 0.300639902685935 -2.71555949830678 0.00661638864995006 0.509461926046154 FALSE Anaeroglobus geminatus (SP17) 0.263856718213853 1.07566962368542 0.245295314103819 0.806227779745694 1 FALSE Streptococcus sp._Oral_Taxon_B66 (SP172) -0.0949081650618779 0.186718679272904 -0.508294967763575 0.611246498613103 1 FALSE Leptotrichia shahii (SP175) -0.231035313903695 1.63218371821097 -0.14154982146062 0.887435604381747 1 FALSE Selenomonas artemidis (SP177) 0.146091902688952 0.29169209547531 0.500842857777466 0.616481720562206 1 FALSE Alloprevotella tannerae (SP182) 0.177798909778748 0.171274605966642 1.03809265112761 0.299226922460874 1 FALSE Actinomyces sp._HMT_414 (SP184) 1.02078599627635 1.87336682724496 0.544893814404493 0.585826550768739 1 FALSE Fusobacterium nucleatum (SP22) 1.85819438440033 1.57811126451629 1.17747995732727 0.239003992644874 1 FALSE Streptococcus sp._str._2136FAA (SP24) -0.0338589690605774 0.297591688245479 -0.113776595240952 0.90941489238509 1 FALSE Streptococcus anginosus (SP25) 1.80000009108666 1.03609546455201 1.73729173871535 0.0823356890177642 1 FALSE Haemophilus parainfluenzae (SP3) -0.16752798909992 0.150697362290924 -1.11168494626007 0.266273634539368 1 FALSE Granulicatella adiacens (SP30) 0.515348076182973 1.54370787224901 0.333837823494524 0.738501940143119 1 FALSE Granulicatella paradiacens (SP31) 0.0266469030709333 0.741489238388083 0.0359370058139492 0.971332588541611 1 FALSE Streptococcus oralis (SP36) 0.0545497776217473 0.179847423066034 0.303311421936352 0.761652542496962 1 FALSE Actinomyces odontolyticus (SP37) -1.37304492640847 1.71563848853389 -0.800311333410234 0.42353043831326 1 FALSE Lancefieldella rimae (SP39) 0.138590764690095 1.56590641926357 0.0885051386118421 0.929475200346927 1 FALSE Fusobacterium nucleatum_ss_polymorphum (SP4) 1.3646616565865 1.38215999761094 0.987339858587513 0.323476056873933 1 FALSE Neisseria elongata (SP41) -0.125539876636331 1.54067079878369 -0.081483907357393 0.935057122386873 1 FALSE Streptococcus sp._str._C300 (SP45) 0.040355875190441 0.109142141230783 0.369755208532219 0.711564891957099 1 FALSE Selenomonas sputigena (SP48) -2.61039094007817 1.24533118067974 -2.0961419585217 0.0360695998878715 1 FALSE Streptococcus sanguinis (SP49) -0.303056978325779 0.0939958900083107 -3.2241513783101 0.00126346591248389 0.101077272998711 FALSE Veillonella parvula (SP5) -0.246070620102449 0.113437709269829 -2.16921358590848 0.0300664721676043 1 FALSE Campylobacter showae (SP50) 1.42312673535748 1.2747765922405 1.11637344458628 0.264262315613509 1 FALSE Actinomyces sp._HMT_448 (SP51) -4.34531680591708 1.38214398949529 -3.14389588852015 0.00166714741349527 0.130037498252631 FALSE Arachnia propionica (SP52) 1.90598484238469 1.00731589454504 1.89214213009667 0.0584720463174667 1 FALSE Streptococcus mitis (SP53) -0.836557027857099 0.489855391671708 -1.70776323396629 0.0876802836290723 1 FALSE Campylobacter concisus (SP55) 1.32583370491511 0.907003906216521 1.46177287201077 0.143803460359541 1 FALSE Atopobium rimae (SP58) 1.35688827983427 1.13861057588823 1.1917053192447 0 0 TRUE Actinomyces sp._Oral_Taxon_180 (SP6) 0.513578169446953 0.391779360091823 1.31088623281886 0.189896202773543 1 FALSE Dialister invisus (SP61) 0.170452125599101 1.32590531043229 0.128555277860323 0.897709555668854 1 FALSE Prevotella salivae (SP63) 0.191385759345444 1.45676788145505 0.13137697623748 0.895477101087672 1 FALSE Campylobacter gracilis (SP65) 0.0714900945425365 1.56949488265746 0.045549746821404 0.963669123789386 1 FALSE Streptococcus vestibularis (SP71) -1.0240541872196 0.798706338359408 -1.2821410549002 0 0 TRUE Prevotella sp._HMT_317 (SP76) -1.45943982891289 1.72032736173696 -0.848350064861693 0.396243043433849 1 FALSE Streptococcus intermedius (SP77) 0.274611344261332 0.244914192378977 1.12125533271016 0.262179192769937 1 FALSE Parvimonas micra (SP78) 1.56741674235061 1.23067368702577 1.2736249737643 0.202796357183574 1 FALSE Actinomyces israelii (SP79) 0.959594693647302 1.41881309986836 0.676336223380184 0.498827199297212 1 FALSE Oribacterium sp._Oral_Taxon_78 (SP80) 1.1657729529185 0.829612335778483 1.40520204756185 0 0 TRUE Corynebacterium matruchotii (SP82) 3.74931051032131 1.50804525191305 2.48620557345019 0.0129113357909741 0.95543884853208 FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP83) 0.266735244904009 0.234608299463412 1.13693865696174 0.25556393045987 1 FALSE Prevotella oris (SP87) 1.81185395423754 1.24118815530652 1.45977380342474 0.144352250498643 1 FALSE Megasphaera micronuciformis (SP90) 0.984567804055503 0.68473286446263 1.4378860065789 0 0 TRUE Prevotella oulorum (SP91) 1.55628125968491 1.43096973781427 1.0875710495891 0.276784517025866 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP93) 1.54601421092458 1.41232978177208 1.09465525040813 0 0 TRUE Streptococcus gordonii (SP95) -0.151452111001925 0.170373589944231 -0.888941244071341 0.37403465798258 1 FALSE Prevotella melaninogenica (SP96) -0.179299672719878 0.16827251311014 -1.06553155596197 0.286635453452794 1 FALSE Actinomyces viscosus_nov_96.023% (SPN15) -1.14508351198101 1.34391401667681 -0.852051171259112 0.394185691380473 1 FALSE Actinomyces sp._HMT_175_nov_97.822% (SPN26) -0.295700469307247 0.41923143167694 -0.70533945444986 0.480599012783958 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957_nov_97.639% (SPN37) 1.28999804801355 0.929508267653354 1.38782848190291 0 0 TRUE Actinomyces massiliensis_nov_96.357% (SPN59) 0.0465682110183056 1.69137101557133 0.0275328183997378 0.978034764465272 1 FALSE Atopobium_Lancefieldella parvula_parvulum (SPP2) -1.12731666684128 1.76145170978366 -0.639992944785146 0.522177186164307 1 FALSE Prevotella sp._HMT_292_sp._HMT_300 (SPP8) -0.27700736624241 1.6021617624397 -0.172896003847074 0.862733172818997 1 FALSE Granulicatella adiacens_paradiacens (SPP9) 0.136248731130231 1.45804773914414 0.0934460014390255 0.925549246505035 1 FALSE