GroupPeriodontitis...1 GroupPeriodontitis...2 GroupPeriodontitis...3 GroupPeriodontitis...4 GroupPeriodontitis...5 GroupPeriodontitis...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance FusobacteriumFusobacterium nucleatum_subsp._polymorphum (SP1) -0.76678564960526 0.775547613884058 -0.98870222263348 0.322808855042529 1 FALSE FusobacteriumFusobacterium periodonticum (SP10) 0.395855383488338 0.732360079405011 0.540520154798636 0.588838365345569 1 FALSE CampylobacterCampylobacter gracilis (SP103) -0.059382974152737 0.325937243541222 -0.182191435098231 0.855432494307566 1 FALSE OribacteriumOribacterium sinus (SP11) 0.634057545181673 0.646725019901132 0.980412889049205 0.326882350017746 1 FALSE CapnocytophagaCapnocytophaga sp._oral_taxon_326 (SP12) -2.40793158001132 0.385001890503204 -6.25433702900553 3.99208081569038e-10 2.59485253019875e-08 TRUE PrevotellaPrevotella multiformis (SP128) 0.0441240835917769 0.253545113371758 0.174028530879554 0 0 TRUE StreptococcusStreptococcus cristatus (SP13) -1.54952621155714 0.417263579535295 -3.71354291999997 0.000204377784296352 0.00858386694044679 TRUE PrevotellaPrevotella oralis (SP131) -0.534198220266651 0.381000434833491 -1.40209346611405 0 0 TRUE Peptostreptococcaceae_[XI][G-2]Peptostreptococcaceae_[XI][G-2] sp._oral_taxon_091 (SP138) 0.00682280399151924 0.253506570166041 0.0269137166230069 0.978528553197735 1 FALSE AtopobiumAtopobium sp._oral_taxon_199 (SP14) 4.71773970045527 0.449660768188877 10.4917752096923 9.42408844114606e-26 7.44502986850539e-24 TRUE Bacteroidetes_[G-5]Bacteroidetes_[G-5] sp._oral_taxon_511 (SP145) -0.071135117190732 0.234472988696712 -0.303382993436163 0.761598004599279 1 FALSE ParvimonasParvimonas micra (SP15) 3.07388738357208 0.439339755689624 6.99660648453508 2.62236482676763e-12 1.86187902700501e-10 TRUE SlackiaSlackia exigua (SP16) 1.51113754394051 0.798431328099389 1.89263308033976 0.0584066813771558 1 FALSE CatonellaCatonella morbi (SP17) 2.29976379495491 0.395569808290939 5.81380011000094 6.10703332897286e-09 3.72529033067344e-07 TRUE AtopobiumAtopobium parvulum (SP18) -1.16589893635149 0.469815109092557 -2.48161226360602 0.0130789504379191 0.405447463575493 FALSE SolobacteriumSolobacterium moorei (SP19) 0.323232481529879 0.440873641920993 0.733163543462196 0.46345868778065 1 FALSE CampylobacterCampylobacter concisus (SP2) -1.03622136724297 0.745246331935719 -1.39044141894864 0.164394876488911 1 FALSE StreptococcusStreptococcus tigurinus (SP20) 1.85742070030474 0.436979169440428 4.25059323235763 2.13205063865179e-05 0.0010660253193259 TRUE PrevotellaPrevotella oulorum (SP21) -1.47336466829615 0.342315440463664 -4.3041139666399 1.67655347819113e-05 0.000878894682160251 TRUE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._oral_taxon_274 (SP22) 0.9075738047441 0.367822953023125 2.46742025554626 0.0136090530283972 0.408271590851916 FALSE PrevotellaPrevotella melaninogenica (SP23) -2.05143893296702 0.5486873866179 -3.73881190455654 0.000184891996581831 0.00795035585301875 TRUE CryptobacteriumCryptobacterium curtum (SP24) -1.36649887911159 0.456256800653945 -2.9950213939891 0.00274425593030693 0.0905604457001286 FALSE PrevotellaPrevotella salivae (SP25) -1.49609268881248 0.31878544811492 -4.69310220293727 2.69092968225195e-06 0.000153382991888361 TRUE FretibacteriumFretibacterium sp._oral_taxon_360 (SP26) 2.31563823253496 0.35614676269271 6.50192132880045 7.9300572060233e-11 5.55104004421631e-09 TRUE AlloprevotellaAlloprevotella sp._oral_taxon_308 (SP27) -1.71514357426771 0.313336605857456 -5.47380530140793 4.40472998129311e-08 2.64283798877587e-06 TRUE CapnocytophagaCapnocytophaga leadbetteri (SP28) -0.634060513329478 0.354046294531915 -1.79089718808601 0.0733097950184255 1 FALSE GranulicatellaGranulicatella adiacens (SP29) -1.91966272601929 0.309290246176262 -6.20667075587405 5.4118813132806e-10 3.46360404049958e-08 TRUE KlebsiellaKlebsiella sp._Oral_Taxon_A36 (SP3) -4.97151915434911 0.541492237763483 -9.18114574436542 0 0 TRUE PorphyromonasPorphyromonas endodontalis (SP30) 1.97747335000416 0.461969598728091 4.28052702049789 1.86451246691226e-05 0.000950901358125255 TRUE MogibacteriumMogibacterium diversum (SP31) 3.13107170898728 0.497868331459316 6.28895535454063 3.1960936196374e-10 2.10942178896068e-08 TRUE CatonellaCatonella sp._oral_taxon_164 (SP32) 0.957594913094001 0.290518616812453 3.29615679573535 0 0 TRUE EikenellaEikenella corrodens (SP33) -2.50246473826406 0.333669014454577 -7.4998415491311 6.3895023355063e-14 4.6643367049196e-12 TRUE StreptococcusStreptococcus dentisani (SP34) 1.6771779685785 0.42004774508509 3.99282697789213 6.52902099698758e-05 0.00306863986858416 TRUE AlloprevotellaAlloprevotella rava (SP35) 1.10111046147017 0.284923514575027 3.86458261654014 0.000111279321157492 0.00496596588873913 TRUE FretibacteriumFretibacterium fastidiosum (SP36) 1.93252542263184 0.305167926898309 6.33266228949354 2.4096660964562e-10 1.63857294559022e-08 TRUE AlloprevotellaAlloprevotella tannerae (SP37) 1.70906638411561 0.503909572114103 3.39161325502389 0.000694824402785379 0.0270981517086298 TRUE ParvimonasParvimonas sp._oral_taxon_110 (SP38) 0.369298887637464 0.621695986699061 0.594018452006232 0.552499771589051 1 FALSE StreptococcusStreptococcus oralis (SP39) -3.88245968265583 0.439588692519352 -8.83202809518336 0 0 TRUE FusobacteriumFusobacterium sp._HOT_204 (SP4) -4.01361251261281 0.622774824420762 -6.44472505186099 1.15810169616905e-10 7.99090170356645e-09 TRUE Bacteroidetes_[G-3]Bacteroidetes_[G-3] sp._oral_taxon_280 (SP40) 1.10212360319505 0.361837442176736 3.04590811985878 0 0 TRUE FusobacteriumFusobacterium nucleatum_subsp._animalis (SP41) 0.207002784820065 0.533908553250285 0.387712059602511 0.698229130291795 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP42) -1.32326679223913 0.320340797110084 -4.13080945098728 3.61488129009634e-05 0.00177129183214721 TRUE PrevotellaPrevotella pallens (SP43) -2.40475476494503 0.508222664291925 -4.73169524679784 2.22652514957562e-06 0.000129138458675386 TRUE PropionibacteriumPropionibacterium acnes (SP44) -1.28705051403649 0.332862027259609 -3.86661862463716 0.000110354797527536 0.00496596588873913 TRUE PorphyromonasPorphyromonas sp._oral_taxon_279 (SP45) -1.95407908500912 0.43307066033749 -4.51214839510559 6.41742620663426e-06 0.000352958441364884 TRUE PrevotellaPrevotella sp._oral_taxon_317 (SP46) 0.0887846364494185 0.410295763163211 0.216391794458041 0.828682361834056 1 FALSE Peptostreptococcaceae_[XI][G-9]Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP47) 0.842038133817102 0.432324556204697 1.94769906481651 0 0 TRUE PorphyromonasPorphyromonas sp._oral_taxon_278 (SP48) 0.5904817291128 0.547868390095949 1.07778024756892 0.281131836449241 1 FALSE StomatobaculumStomatobaculum longum (SP49) 0.361923293475134 0.507484430887664 0.713171225454302 0 0 TRUE FusobacteriumFusobacterium nucleatum_subsp._vincentii (SP5) 3.0703712855438 0.326033610352487 9.41734590560866 4.62634032859359e-21 3.608545456303e-19 TRUE FusobacteriumFusobacterium sp._oral_taxon_203 (SP50) -0.568380486956859 0.256697388121088 -2.21420440276839 0.0268147211429269 0.777626913144882 FALSE Peptostreptococcaceae_[XI][G-7]Peptostreptococcaceae_[XI][G-7] sp._oral_taxon_081 (SP51) 1.40039116709113 0.406978076709056 3.44094988706787 0 0 TRUE StreptococcusStreptococcus sp._oral_taxon_056 (SP52) 0.0626188845439446 0.226042666534143 0.277022411317583 0.781762897582026 1 FALSE BurkholderiaBurkholderia cepacia (SP53) -1.28652935086175 0.358777941981674 -3.58586523952878 0.000335962427272597 0.0137744595181765 TRUE PorphyromonasPorphyromonas sp._oral_taxon_284 (SP55) -3.08555092549281 0.520986290415104 -5.92251846595492 3.1704819152551e-09 1.96569878745816e-07 TRUE Peptostreptococcaceae_[XI][G-7]Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsp._yurii_&_margaretiae (SP56) 0.322917917524591 0.299581811654421 1.07789560301174 0 0 TRUE StreptococcusStreptococcus sp._oral_taxon_058 (SP59) -2.3788420522391 0.483401701764775 -4.92104608559415 8.60828553779696e-07 5.07888846730021e-05 TRUE StreptococcusStreptococcus sp._oral_taxon_423 (SP6) -6.03143314035826 0.432351708388313 -13.9502932990406 3.13314274378953e-44 2.50651419503162e-42 TRUE AtopobiumAtopobium rimae (SP60) -0.00553174825547842 0.443480567880827 -0.0124734850997235 0.990047856892254 1 FALSE OribacteriumOribacterium sp._oral_taxon_078 (SP61) -0.0400553507771175 0.394962832559725 -0.10141549400363 0.919220637450395 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP63) -1.48936727910331 0.365978549909918 -4.06954800894726 4.71044327552938e-05 0.0022610127722541 TRUE StreptococcusStreptococcus sp._oral_taxon_070 (SP66) 2.02143124666938 0.319329711552145 6.33023227573765 0 0 TRUE VeillonellaVeillonella parvula_group (SP67) -1.72802798191428 0.578355888494784 -2.98782811118532 0.00280967525403569 0.0905604457001286 FALSE LautropiaLautropia mirabilis (SP69) -1.36449010528415 0.413013498560842 -3.30374215380068 0.000954035355909331 0.0352993081686452 TRUE StreptococcusStreptococcus mitis (SP7) -1.79817419169357 0.298775125090852 -6.01848695117029 1.76054902854971e-09 1.10914588798632e-07 TRUE CapnocytophagaCapnocytophaga sp._oral_taxon_338 (SP71) -1.76806088973202 0.408573973184897 -4.32739480674628 1.50883365607145e-05 0.000814770174278583 TRUE PrevotellaPrevotella sp._oral_taxon_472 (SP72) -1.05513466314878 0.324387778334233 -3.25269548861248 0.00114315931917663 0.040010576171182 TRUE StreptococcusStreptococcus sanguinis (SP73) -3.29846863641818 0.369635198109855 -8.92357830987156 4.51460289520607e-19 3.43109820035661e-17 TRUE Lachnospiraceae_[G-8]Lachnospiraceae_[G-8] sp._oral_taxon_500 (SP76) 0.374932083345872 0.262158280310591 1.43017448429122 0 0 TRUE OribacteriumOribacterium sp._oral_taxon_102 (SP8) 1.95411429589362 0.453755228411654 4.30653835710916 1.65829185313255e-05 0.000878894682160251 TRUE EikenellaEikenella sp._oral_taxon_011 (SP80) -0.29442360347574 0.426916471940092 -0.689651542695817 0 0 TRUE StreptococcusStreptococcus sp._oral_taxon_064 (SP82) -2.8580962437493 0.364548765369767 -7.84009305545252 4.50212667522904e-15 3.33157373966949e-13 TRUE CampylobacterCampylobacter showae (SP9) 2.20015121767459 0.477312137887068 4.60946002214414 4.03716151994416e-06 0.000226081045116873 TRUE CapnocytophagaCapnocytophaga sp._oral_taxon_864 (SP91) -2.19429958999541 0.308530699155822 -7.11209482881051 1.14294682588952e-12 8.22921714640452e-11 TRUE StomatobaculumStomatobaculum sp._oral_taxon_097 (SP98) -0.305866126490303 0.413478175728851 -0.739739469806703 0 0 TRUE Lachnospiraceae_[G-8]Lachnospiraceae_[G-8] sp._oral_taxon_500_nov_97.912% (SPN126) -0.169888256764621 0.220909679859798 -0.769039441243327 0 0 TRUE FusobacteriumFusobacterium naviforme_nucleatum_subsp._vincentii (SPP15) 1.17975056821785 0.354209377094164 3.33065876995184 0.000866407386434869 0.032923480684525 TRUE FusobacteriumFusobacterium nucleatum_subsp._polymorphum_periodonticum (SPP8) -0.30282335419951 0.517639642759179 -0.585008042632455 0.558542308921307 1 FALSE FusobacteriumFusobacterium nucleatum_subsp._polymorphum_sp._HOT_204 (SPP9) -0.542142578272714 0.261286568247951 -2.07489647059944 0.0379961308947863 1 FALSE ParvimonasParvimonas multispecies_sppn3_2_nov_96.868% (SPPN3) -2.85170001344972 0.727506885865268 -3.91982545987592 8.86131209721373e-05 0.00407620356471832 TRUE