GroupParkinson...1 GroupParkinson...2 GroupParkinson...3 GroupParkinson...4 GroupParkinson...5 GroupParkinson...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Prevotella sp._HMT_317 (SP10) 1.60277685183377 1.33926509078482 1.19675847811021 0.231400706589578 1 FALSE Treponema amylovorum (SP103) 0.360504400156108 0.75365750262838 0.478339827970728 0 0 TRUE Fretibacterium sp._HMT_360 (SP105) 1.78454004851543 1.18634618036957 1.50423213564822 0 0 TRUE Leptothrix sp._HMT_025 (SP106) -5.05871122766459 1.50133705220424 -3.36947071294714 0 0 TRUE Dialister invisus (SP107) -0.655671060875697 1.23539962375637 -0.530736004987644 0.595601732008218 1 FALSE Haemophilus parainfluenzae (SP109) -3.57393776001021 1.2857898544854 -2.77956599792941 0 0 TRUE Tannerella forsythia (SP11) 3.02588033730772 0.948528585921479 3.19007817183299 0 0 TRUE Veillonellaceae_[G-1] bacterium_HMT_135 (SP110) -0.0661394353733709 0.671102344751638 -0.0985534261511898 0 0 TRUE Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP112) 0.142734055961207 0.755776066027762 0.188857602638033 0 0 TRUE Capnocytophaga sp._HMT_338 (SP114) -0.76656453546745 0.835524947074464 -0.9174645690132 0.358899251061249 1 FALSE Porphyromonas endodontalis (SP116) 0.514783571406588 1.30280521020896 0.395134719582539 0.692743466810514 1 FALSE Bacteroidaceae_[G-1] bacterium_HMT_272 (SP139) 0.899413633060923 0.860198228002314 1.04558880009516 0 0 TRUE Lautropia mirabilis (SP14) -2.63742026894276 1.34333243801814 -1.96334145912074 0.0496065111058273 1 FALSE Treponema lecithinolyticum (SP140) -0.00831474123234099 0.998157437345139 -0.00833008994498526 0.993353626708634 1 FALSE Treponema sp._HMT_237 (SP141) 1.94339965120322 1.16824130900347 1.66352587964979 0.0962072148779192 1 FALSE Treponema denticola (SP143) 2.82181814921359 1.03035713265519 2.73867968666543 0.00616864411021866 0.771080513777333 FALSE Porphyromonas gingivalis (SP15) 1.54944259995332 1.12280788541349 1.37997124893964 0 0 TRUE Treponema maltophilum (SP150) 0.562081244837978 0.866271842942409 0.64885087679728 0 0 TRUE Selenomonas noxia (SP154) 0.413461155330713 0.994456703431164 0.41576586884492 0 0 TRUE Alloprevotella tannerae (SP157) 2.45593008065832 0.980576102478981 2.50457876186205 0 0 TRUE Treponema sp._HMT_270 (SP158) -0.983213132147835 0.674019969672882 -1.45872997297841 0.144639443081043 1 FALSE Prevotella oralis (SP159) -0.964395928127529 1.27506343335645 -0.756351333508852 0.449438578189441 1 FALSE Peptidiphaga sp._HMT_183 (SP160) -0.582881284744593 1.16127525621701 -0.501932062725077 0.61571531060334 1 FALSE Leptotrichia sp._Oral_Taxon_B57 (SP161) 0.736868778481694 0.87048858241004 0.846500222256327 0 0 TRUE Campylobacter concisus (SP164) 0.522603487973322 0.836636402792244 0.624648277590063 0 0 TRUE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP165) 1.23162341908985 1.08062945075483 1.13972779312052 0.254399724348795 1 FALSE Fretibacterium sp._HMT_361 (SP169) 0.16940051624157 0.813846762177676 0.208147926752564 0 0 TRUE Peptostreptococcaceae_[XI][G-1] bacterium_HMT_383 (SP17) -0.0222895886656527 0.74869283976887 -0.0297713394354536 0 0 TRUE Clostridiales_[G] sp._Oral_Taxon_G74 (SP170) 0.679755096122732 0.939195344365894 0.723763272678565 0 0 TRUE Veillonellaceae_[G-1] bacterium_HMT_155 (SP173) 0.772783352599211 0.960870939614475 0.804253017485648 0 0 TRUE Prevotella sp._HMT_292 (SP174) 1.10994449438734 0.940067738131761 1.18070693138898 0 0 TRUE Fretibacterium sp._HMT_359 (SP176) -0.134687206571244 1.31175824043439 -0.102676851892039 0.918219446040296 1 FALSE Anaerolineae_[G-1] bacterium_HMT_439 (SP177) 0.677321395286171 0.911295009585523 0.743251513682963 0 0 TRUE Kingella oralis (SP178) -0.789374577682677 0.883471446765461 -0.893491895604223 0.371593810276696 1 FALSE Cardiobacterium hominis (SP18) -1.41727394020699 0.828113990090478 -1.71144788901845 0.0869984631890842 1 FALSE Desulfobulbus sp._HMT_041 (SP181) 0.176766636554928 0.846928666367392 0.208714905486795 0 0 TRUE Dialister pneumosintes (SP183) 1.14413236473485 0.899166649742269 1.27243638880823 0 0 TRUE Porphyromonas pasteri (SP184) -1.03308682307347 0.916598735611968 -1.12708733160507 0.259705558992863 1 FALSE Prevotella micans (SP185) -0.814243838336307 0.906155328229492 -0.898569829001869 0.36888183528199 1 FALSE Capnocytophaga leadbetteri (SP186) -2.07349433004316 1.1647990257457 -1.78013054974502 0.0750545979887252 1 FALSE Prevotella denticola (SP19) 1.55745682393821 1.1578934487616 1.34507784425584 0 0 TRUE Fretibacterium fastidiosum (SP199) 2.42632361793128 1.21511908711913 1.99677845871365 0.0458492546298428 1 FALSE Selenomonas sputigena (SP2) 4.71730053932826 0.958560060391239 4.92123627329401 8.59992313937239e-07 0.000117818947009402 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP204) 1.01736120378623 0.906894553911906 1.12180760089233 0 0 TRUE Porphyromonas sp._HMT_278 (SP207) -0.0383543677907406 0.743495392893637 -0.0515865574384635 0 0 TRUE Prevotella sp._HMT_314 (SP208) 0.571302185050585 0.90491191513386 0.631334581295766 0 0 TRUE Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 (SP209) -0.316937926671325 0.504830869073531 -0.627810116391995 0 0 TRUE Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP21) 3.13527955716135 0.919917310019466 3.40821889425584 0 0 TRUE Peptococcus sp._HMT_167 (SP210) -0.984951248577901 0.694862459493994 -1.4174765597427 0.156343642837228 1 FALSE Prevotella sp._HMT_300 (SP212) 1.24994096723464 0.991800007883027 1.26027521405511 0 0 TRUE Bacteroidetes_[G-5] bacterium_HMT_511 (SP223) -0.0460043464733397 1.0355647833508 -0.0444244022324536 0.964566110678236 1 FALSE Treponema parvum (SP226) -0.199587594836787 0.595205852929003 -0.335325322919152 0 0 TRUE Selenomonas sp._HMT_134 (SP229) 0.707826478118398 0.959354969675584 0.737814990792988 0 0 TRUE Veillonella parvula (SP23) 0.683140468374168 1.39182053344465 0.490825111398124 0.623550147676222 1 FALSE Prevotella oulorum (SP243) 1.04311665648879 0.861229351057215 1.21119496822571 0 0 TRUE Bacteroidetes_[G-5] bacterium_HMT_505 (SP244) -1.28773457035918 0.821169734215579 -1.56817100862745 0.11684122834789 1 FALSE Fretibacterium sp._HMT_358 (SP25) 0.148480894524707 0.799101910599765 0.185809710320008 0 0 TRUE Pseudoramibacter alactolyticus (SP261) -0.0855886777530012 0.708239981988694 -0.120847000917222 0 0 TRUE Parvimonas micra (SP275) 1.21091426734851 0.825170629011411 1.46747136261895 0 0 TRUE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP278) 0.013962702716463 0.722777310683804 0.019318125389483 0 0 TRUE Alloprevotella rava (SP288) 0.671491032444955 0.852523162817156 0.787651364481427 0.430900661216029 1 FALSE Aggregatibacter sp._HMT_513 (SP299) -1.23558619493723 0.735262177696145 -1.68047022194014 0.0928658633431654 1 FALSE Capnocytophaga granulosa (SP302) -0.0497950302240502 0.705172210872035 -0.0706139996107792 0 0 TRUE Clostridiales_[F-1][G-1] bacterium_HMT_093 (SP307) -0.0439827102990455 0.683972081681633 -0.0643048327219854 0 0 TRUE Treponema sp._HMT_231 (SP308) 1.00036564506114 0.828481304435874 1.2074691845247 0 0 TRUE Eikenella corrodens (SP315) -0.800761213787895 0.926440050891718 -0.864342180605367 0.387399945153555 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 (SP334) -1.2471390020671 0.753321916041236 -1.65551934108184 0.0978191964528013 1 FALSE Prevotella melaninogenica (SP336) -0.184540519616353 1.19489345777481 -0.154440982512377 0.877262041899023 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP35) 1.33312380798371 1.14060929419365 1.16878217174809 0.242491405113177 1 FALSE Selenomonas flueggei (SP355) 0.0969425727685345 0.785786950716236 0.123370046652178 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_952 (SP36) 0.105856730710872 0.754618721716122 0.140278431563607 0 0 TRUE Porphyromonas sp._Oral_Taxon_B94 (SP365) 0.00550642798356327 0.692209206647838 0.00795486094475578 0 0 TRUE Prevotella intermedia (SP37) -2.28098596302129 1.25147587321988 -1.82263678575969 0.0683584203184373 1 FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP41) 0.0122053691575821 0.613714789487266 0.0198876894718134 0 0 TRUE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP42) 1.38256215858619 1.02408860470452 1.35004154155694 0.177002658102196 1 FALSE Acinetobacter johnsonii (SP44) -2.75558463294122 1.17128798802981 -2.35261068251568 0.0186421407775899 1 FALSE Anaeroglobus geminatus (SP45) 1.43821431418082 1.03257015145579 1.39284901093947 0 0 TRUE Corynebacterium matruchotii (SP47) 0.431236292320608 1.18791880121067 0.363018324048002 0.716591196115327 1 FALSE Campylobacter gracilis (SP48) 3.84081661547554 0.634662148678015 6.0517499325836 0 0 TRUE Gemella morbillorum (SP49) -2.61422388557888 0.959710303507719 -2.72397188612433 0 0 TRUE Treponema sp._HMT_257 (SP50) 1.03391160853414 0.831460485833954 1.24348856758614 0 0 TRUE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP51) 1.50578044998228 0.838501962533634 1.79579836096315 0 0 TRUE Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP53) 1.38806140321279 1.04705740332186 1.32567841916696 0 0 TRUE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP54) -0.118441832347879 1.01633915349268 -0.116537704899836 0.907226405470297 1 FALSE Prevotella pleuritidis (SP55) 1.15084653349858 1.1768062762071 0.977940513036531 0.328103746385106 1 FALSE Solobacterium moorei (SP57) -1.62423920665042 1.1694327238667 -1.38891205411109 0.164859494604522 1 FALSE Selenomonas artemidis (SP58) -1.32091584800466 0.881752665452351 -1.49805710802929 0.134118413686907 1 FALSE Treponema socranskii (SP59) 4.29185773872668 0.730585966921128 5.87454171452765 4.24014702535362e-09 5.851402894988e-07 TRUE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP60) 2.57564662128797 0.706090810211255 3.64775547853026 0.000264541218337123 0.0357130644755116 TRUE Bacteroidetes_[G-3] bacterium_HMT_280 (SP61) 1.11294902057333 0.904411199456725 1.23057854794575 0 0 TRUE Fusobacterium nucleatum_ss_animalis (SP71) 0.342258573002223 0.950375499140046 0.360129836377219 0 0 TRUE Veillonellaceae_[G-1] sp._Oral_Taxon_G40 (SP72) 0.121213627027375 0.873961625491662 0.138694450067169 0 0 TRUE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP73) 1.18606635539306 1.14610219018283 1.03486963514471 0.300729797041561 1 FALSE Prevotella oris (SP74) 2.73352892459007 1.20778682966827 2.26325445636864 0.0236200080389274 1 FALSE Mycoplasma faucium (SP75) 0.576713641647737 0.848063173418188 0.680036180940679 0.496481551930536 1 FALSE Leptotrichia sp._HMT_498 (SP76) 0.179716070751778 0.861406146693536 0.208631052194843 0 0 TRUE Selenomonas sp._HMT_126 (SP79) 0.755201444580172 0.869343993354091 0.86870266586471 0 0 TRUE Acinetobacter sp._Oral_Taxon_A58 (SP83) -4.57972984466261 1.09749450189328 -4.17289547853055 0 0 TRUE Filifactor alocis (SP84) 1.73929980929762 0.972169789079091 1.78909057742394 0.0736002294097537 1 FALSE Sphingobium yanoikuyae (SP88) -4.1220105291266 1.17556060819083 -3.50642110700725 0 0 TRUE Prevotella nigrescens (SP9) 3.68237417057637 1.18914620139249 3.09665385657737 0.00195718265889527 0.252476562997489 FALSE Acidovorax temperans (SP96) -4.4041072831527 1.29243509808972 -3.40760421135436 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346_nov_97.968% (SPN10) 0.708551263473508 0.887048757987018 0.798773750702752 0 0 TRUE Treponema sp._HMT_927_nov_94.839% (SPN14) -1.07490713742412 0.843726190091945 -1.27399996592139 0.202663428249099 1 FALSE Prevotella intermedia_nov_96.963% (SPN18) -0.150844867797489 0.665974335117809 -0.226502523961084 0 0 TRUE Treponema sp._Oral_Taxon_G53_nov_96.368% (SPN27) -0.213812324618534 0.540199342078829 -0.395802637959031 0 0 TRUE Treponema sp._HMT_262_nov_97.634% (SPN9) -0.0152145030538676 0.730921578401053 -0.0208155067567584 0 0 TRUE Pseudomonas alcaliphila_chengduensis_mendocina_oleovorans_toyo ...(5 species) (SPP100) -4.10937072211818 1.50340689279551 -2.73337227719969 0 0 TRUE Selenomonas sp._HMT_138_sp._HMT_892 (SPP11) 0.707599951206531 0.87833011870715 0.805619591239881 0 0 TRUE Streptococcus sanguinis_sp._Oral_Taxon_B66 (SPP14) -3.67937162094223 1.30753583976616 -2.81397381933351 0 0 TRUE Prevotella sp._HMT_292_sp._HMT_300 (SPP18) 0.462131016719258 0.791760991306929 0.583674899108678 0 0 TRUE Fusobacterium canifelinum_nucleatum_nucleatum_ss_polymorphum_nuc ...(4 species) (SPP19) -0.69847591767822 1.07762909815822 -0.648159852839893 0.516881565424276 1 FALSE Streptococcus anginosus_constellatus (SPP28) -1.30879595661574 1.15597098446196 -1.13220485133968 0.257548320997739 1 FALSE Peptococcus sp._HMT_167_sp._Oral_Taxon_167 (SPP31) -0.228902054406516 0.563859058906271 -0.405956153033211 0 0 TRUE Oribacterium sp._HMT_078_sp._Oral_Taxon_78 (SPP33) 0.682614109874738 0.925089118393735 0.737890108425429 0 0 TRUE Catonella morbi_sp._HMT_164 (SPP35) -0.0495260072630703 1.03302964372481 -0.047942484094158 0.961762080888944 1 FALSE Streptococcus cristatus_gwangjuense_infantis_infantis_clade_431_ ...(20 species) (SPP4) -1.97659055397745 1.63312330627934 -1.21031311376029 0.226158767538174 1 FALSE Veillonella dispar_parvula (SPP41) -0.789161997269281 1.34346247446267 -0.587409036180866 0.556929026468487 1 FALSE Neisseria oralis_sp._Oral_Taxon_14 (SPP47) -2.04625843291279 0.935988524825756 -2.18620034181907 0.0288009512791373 1 FALSE Fretibacterium sp._HMT_358_sp._HMT_362 (SPP48) 0.355978348601397 0.974081267781382 0.365450358584753 0 0 TRUE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP52) -0.880496453703027 0.782212696441592 -1.12564837889815 0.26031438178215 1 FALSE Cutibacterium_Propionibacterium acnes_sp._str._LG (SPP57) -2.78978309435726 1.18302852036216 -2.35817061578805 0 0 TRUE Eubacterium_[XI][G-7]_Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsps._yurii_&_margaretiae_yurii (SPP58) -1.46487059655536 1.05289238780885 -1.39128235089995 0.16413982357578 1 FALSE Pseudomonas fildesensis_veronii (SPP60) -2.9925624917113 1.33115816040116 -2.24808935612088 0 0 TRUE Veillonellaceae_[G-1] bacterium_HMT_132_bacterium_HMT_150 (SPP61) -0.620218753514925 0.961431679207962 -0.64509914425315 0.518862938386146 1 FALSE Selenomonas sp._HMT_134_sputigena (SPP63) -0.054988246295249 0.656116773995461 -0.0838086274801281 0 0 TRUE Dietzia_Nocardia_Rhodococcus coeliaca_erythropolis_qingshengii_sp._Oral_Taxon_D ...(4 species) (SPP67) -1.66330211325416 0.961160616055616 -1.73051421944438 0.0835384429402495 1 FALSE Neisseria flava_macacae_mucosa_sicca_sp._TM101 (SPP69) -0.617716499913292 1.16534539488724 -0.530071601624225 0.596062287787921 1 FALSE Paraburkholderia caledonica_fungorum_strydomiana (SPP70) -3.47960195043449 1.23159953898001 -2.82527058536921 0 0 TRUE Prevotella jejuni_sp._HMT_313 (SPP71) 0.059704726113607 0.753186971993821 0.079269462077335 0 0 TRUE Peptostreptococcaceae_[XI][G-7]_unclassified_Peptostreptococcaceae Oral_sp._str._CM5_bacterium_HMT_081 (SPP78) -1.14931800966045 0.718590592996941 -1.59940586595647 0.109730449746497 1 FALSE Fusobacterium nucleatum_nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP88) -1.22758685079447 0.938324559541263 -1.30827530656836 0.190779947523788 1 FALSE Fusobacterium naviforme_nucleatum_nucleatum_ss_animalis_nucleatu ...(5 species) (SPP89) -1.08521788760311 0.850712649531042 -1.27565740112286 0.202076653355598 1 FALSE Fusobacterium nucleatum_nucleatum_subsp._vincentii (SPP90) -0.387136757438929 0.973548452523401 -0.397655356993774 0.690884249271 1 FALSE Fusobacterium nucleatum_nucleatum_ss_nucleatum_nucleatum_subsp._nucleatum (SPP91) 1.56433313313707 1.1312620929354 1.38282113659261 0 0 TRUE Fusobacterium nucleatum_nucleatum_ss_animalis (SPP92) 0.556927486945682 1.44994227993928 0.384103212004415 0.700901950921198 1 FALSE Fusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP94) -0.419793255011982 0.990872155779262 -0.423660360787754 0.67181352770812 1 FALSE Granulicatella adiacens_paradiacens (SPP96) -1.89602416391915 1.36222462529193 -1.39185867640062 0.163965197492768 1 FALSE Campylobacter rectus_showae (SPP97) 1.13389520428723 1.25074541091305 0.906575546385165 0.364631298046087 1 FALSE