GroupParkinson...1 GroupParkinson...2 GroupParkinson...3 GroupParkinson...4 GroupParkinson...5 GroupParkinson...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Prevotella sp._HMT_317 (SP10) 0.946027333613608 1.40802265218516 0.671883603680262 0.50165779936845 1 FALSE Fusobacterium hwasookii (SP101) -0.764374933741822 1.02977834052543 -0.742271325450299 0.457922961480381 1 FALSE Treponema amylovorum (SP103) 1.33680927413222 0.763545478074271 1.7507919469365 0 0 TRUE Fretibacterium sp._HMT_360 (SP105) 0.542734466651334 1.59027045598953 0.341284380029321 0.73288950573138 1 FALSE Dialister invisus (SP107) -0.750195490771194 1.16143581175297 -0.645920750143666 0.518330680610255 1 FALSE Tannerella forsythia (SP11) 0.906430111198842 1.20591292313566 0.751654695632506 0.452258741754516 1 FALSE Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP112) -0.971344656132843 1.08261070634042 -0.897224321211738 0.36959922972131 1 FALSE Capnocytophaga sp._HMT_338 (SP114) -0.582235156694881 1.06002708718526 -0.549264413837684 0.582824005112706 1 FALSE Porphyromonas endodontalis (SP116) 0.0386823790463966 1.36647326831459 0.0283081857094119 0.977416351965503 1 FALSE Bacteroidaceae_[G-1] bacterium_HMT_272 (SP139) 1.42463255638535 0.955836286266297 1.4904566575415 0.136104204678131 1 FALSE Lautropia mirabilis (SP14) -1.04893356687889 0.975343229449594 -1.07545070822999 0.282172989476548 1 FALSE Treponema lecithinolyticum (SP140) 0.571542129106348 1.13213345478305 0.50483635713766 0.61367377754028 1 FALSE Treponema sp._HMT_237 (SP141) 0.15701499683561 1.3109291303473 0.119773825450055 0.90466231691599 1 FALSE Bacteroidetes_[G-6] bacterium_HMT_516 (SP142) -0.50814096491089 0.78772992107587 -0.64507003138446 0.518881803641403 1 FALSE Treponema denticola (SP143) 0.532762785816993 1.16572869988535 0.45702124848551 0.647655772833694 1 FALSE Porphyromonas gingivalis (SP15) -1.42161097150554 1.44976064446183 -0.980583227263189 0.326798308882782 1 FALSE Treponema maltophilum (SP150) 0.123476254873523 1.07304786030059 0.115070594184805 0.908389167488436 1 FALSE Prevotella maculosa (SP153) -1.0942122427451 1.03017506801637 -1.06216144878369 0.288162397780417 1 FALSE Selenomonas noxia (SP154) 0.144199692620897 1.25006560409959 0.115353699956221 0.908164775986439 1 FALSE Alloprevotella tannerae (SP157) 1.61236242597693 1.28864462854849 1.25120796708172 0.210858612256361 1 FALSE Treponema sp._HMT_270 (SP158) 0.155472086198747 0.690932932278109 0.22501762318107 0.821965564484466 1 FALSE Prevotella oralis (SP159) 0.632696880099769 0.892823872264345 0.708646912066932 0.478543616760494 1 FALSE Peptidiphaga sp._HMT_183 (SP160) 0.0941006764067542 1.26944131984885 0.0741276299545368 0.940908830211876 1 FALSE Leptotrichia sp._Oral_Taxon_B57 (SP161) 0.220405698654787 1.1075765371056 0.198998165156846 0.842264179883725 1 FALSE Centipeda sp._Oral_Taxon_B01 (SP163) -1.05882062311674 0.793029225060708 -1.33515965068714 0.181824099694584 1 FALSE Campylobacter concisus (SP164) 0.268384007451971 1.07920133200243 0.248687616937974 0.803602428229577 1 FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP165) 1.96124487781465 1.1479905637789 1.70841550418213 0.0875592724473179 1 FALSE Fretibacterium sp._HMT_361 (SP169) 0.183387566776302 1.00605456597159 0.182283916776618 0.855359919786179 1 FALSE Clostridiales_[G] sp._Oral_Taxon_G74 (SP170) 0.355280353554867 1.10542395124354 0.321397372614547 0.747909273944532 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP173) 1.19340542040536 1.07288827125608 1.11232963615885 0.265996445987386 1 FALSE Prevotella sp._HMT_292 (SP174) 2.08624936836344 0.958448089235748 2.17669521364166 0 0 TRUE Fretibacterium sp._HMT_359 (SP176) 0.668558954427771 1.27823843240808 0.523031491995018 0.600952338291929 1 FALSE Anaerolineae_[G-1] bacterium_HMT_439 (SP177) 0.406951952388768 1.12425282937072 0.361975475406676 0.717370357296866 1 FALSE Kingella oralis (SP178) -0.228035884050643 1.14075740182767 -0.199898667048133 0.841559832945711 1 FALSE Desulfobulbus sp._HMT_041 (SP181) -0.539676717114087 1.18427332957285 -0.45570283788181 0.648603681007759 1 FALSE Dialister pneumosintes (SP183) 2.12043723871095 0.915525057443011 2.3160886984712 0 0 TRUE Porphyromonas pasteri (SP184) -0.174632706322961 1.00236386609087 -0.174220871512471 0.861691883276198 1 FALSE Prevotella micans (SP185) 0.00662281318697219 0.952483823999008 0.00695320279473753 0.994452191545326 1 FALSE Capnocytophaga leadbetteri (SP186) 0.447783997303452 1.0130883234609 0.441998971791265 0.658489949971198 1 FALSE Prevotella denticola (SP19) 2.53376169791432 1.17840476061842 2.15016247607878 0 0 TRUE Capnocytophaga sp._HMT_336 (SP193) -0.660569249753017 0.92008688239051 -0.717942253493245 0.472792893388228 1 FALSE Fretibacterium fastidiosum (SP199) 1.54985573008236 1.30612039502591 1.18661015935795 0.235381426734835 1 FALSE Selenomonas sputigena (SP2) 2.46168836669256 1.17907776412229 2.08780832070483 0.0368151286971762 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP204) 0.819967218427959 1.13028429711545 0.725452189790267 0.468174665466355 1 FALSE Porphyromonas sp._HMT_278 (SP207) -0.963451808526646 1.0654480352502 -0.904269168134883 0.365852691304261 1 FALSE Prevotella sp._HMT_314 (SP208) 0.841302242687875 1.1019404328782 0.763473430673963 0.445181101885518 1 FALSE Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP21) 0.743670848193393 1.22937484650522 0.604917898155677 0.545233550176451 1 FALSE Peptococcus sp._HMT_167 (SP210) -0.364142723847679 0.842999269926805 -0.431960900605877 0.665769830863196 1 FALSE Prevotella sp._HMT_300 (SP212) 2.22624584121075 1.00932758369196 2.20567224871385 0 0 TRUE Aggregatibacter sp._HMT_458 (SP22) -0.357112105223999 0.651042450280774 -0.548523533403985 0.583332474793277 1 FALSE Bacteroidetes_[G-5] bacterium_HMT_511 (SP223) -0.863620647339346 1.1494085209443 -0.751360923120561 0.452435473381631 1 FALSE Treponema parvum (SP226) 0.360828970803353 0.740926373509549 0.486997067055681 0.626260409416548 1 FALSE Selenomonas sp._HMT_134 (SP229) 0.693403317017024 1.18469556925127 0.585300844380851 0.558345447204524 1 FALSE Veillonella parvula (SP23) 0.715977079245049 1.40453326316156 0.509761568503838 0.610218513183391 1 FALSE Selenomonas sp._HMT_146 (SP236) -1.27718500649153 1.07388540711856 -1.18931219106371 0.234316839800109 1 FALSE Treponema sp._HMT_238 (SP237) -0.694753593151912 1.02661260506313 -0.676743680844627 0.498568596822564 1 FALSE Prevotella oulorum (SP243) 1.53266808541934 0.962668663235539 1.59210343491189 0.111361465436865 1 FALSE Fretibacterium sp._HMT_358 (SP25) 0.459241733464049 1.02307029679677 0.448885804721271 0.6535140367283 1 FALSE Pseudoramibacter alactolyticus (SP261) 0.292322568154387 0.931623307829798 0.313777645640218 0.753689923742287 1 FALSE Parvimonas micra (SP275) 1.21514254975253 0.995599569208227 1.22051333421016 0.222270337852008 1 FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP278) 0.222388676872655 0.895434149240946 0.248358494101629 0.803857044561741 1 FALSE Peptostreptococcus stomatis (SP287) -1.34429824271486 0.931755953163602 -1.44275787898167 0.149088688415158 1 FALSE Alloprevotella rava (SP288) 2.23030125555045 0.814430978703428 2.7384779236923 0 0 TRUE Syntrophomonadaceae_[VIII][G-1] bacterium_HMT_435 (SP3) -0.600607814796536 0.919412711508383 -0.653251589061873 0.513594096536112 1 FALSE Capnocytophaga granulosa (SP302) 0.361612419935936 0.936093174011149 0.38629960133822 0.699274795720316 1 FALSE Alloprevotella sp._HMT_473 (SP306) -0.729267611235519 0.809785733368686 -0.900568608688358 0.367817731353358 1 FALSE Clostridiales_[F-1][G-1] bacterium_HMT_093 (SP307) -0.046232661790082 0.915175601342032 -0.0505178041484995 0.959709761859884 1 FALSE Treponema sp._HMT_231 (SP308) 1.46250416338699 0.976655479991837 1.49746168771736 0.134273167356066 1 FALSE Prevotella melaninogenica (SP336) 0.165235072323155 1.15958049630712 0.142495560117968 0.886688586099811 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP35) 1.76418487653365 1.14345090409175 1.5428601877183 0.12286470229222 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_952 (SP36) -0.365748928939241 0.983011689111844 -0.372069765792609 0.709840906322998 1 FALSE Porphyromonas sp._Oral_Taxon_B43 (SP366) -0.686359027347607 0.894415302127275 -0.767382921239353 0.442853879813126 1 FALSE Prevotella intermedia (SP37) -1.68514370029558 1.06790108355031 -1.57799605811169 0.114566515392094 1 FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP41) 0.684057999361348 0.678898540269199 1.00759974986852 0.313646649073984 1 FALSE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP42) -0.146909226369646 1.16285030027276 -0.126335458945306 0.899466388933864 1 FALSE Acinetobacter johnsonii (SP44) -0.753906322157015 1.04123534068601 -0.724049878733767 0.469035113727097 1 FALSE Anaeroglobus geminatus (SP45) 1.99863087982096 1.10190895375211 1.81378949051591 0.069710141122135 1 FALSE Corynebacterium matruchotii (SP47) -0.807097203981101 1.42840746842878 -0.565032892798363 0.572051391499456 1 FALSE Campylobacter gracilis (SP48) 0.654801018872036 1.10898925948371 0.590448476639781 0.554890018713767 1 FALSE Treponema sp._HMT_257 (SP50) 1.04228213242141 1.0221365388612 1.01970929792085 0.307866350688781 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP51) 2.48208532395839 0.856052648652002 2.89945405562012 0 0 TRUE Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP53) 1.83403578638299 1.17915693856339 1.555378869769 0.119855863493887 1 FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP54) 0.705309303991402 1.02544710388233 0.687806617543814 0.491574568296786 1 FALSE Prevotella pleuritidis (SP55) 2.48571255229617 1.14124601899803 2.17806897979678 0.0294009016224461 1 FALSE Treponema socranskii (SP59) 1.89803675703899 0.852188406505499 2.22725015096382 0.025930560066554 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP60) 3.17466499475591 0.899496285025543 3.5293808852871 0.000416533166522494 0.0508170463157443 FALSE Bacteroidetes_[G-3] bacterium_HMT_280 (SP61) 1.21792856711737 1.0514669522663 1.15831369164031 0.246736045986784 1 FALSE Johnsonella sp._HMT_166 (SP64) -2.6618150486372 0.881626221748078 -3.01921038981734 0 0 TRUE Veillonellaceae_[G-1] bacterium_HMT_129 (SP70) -1.6821333702636 1.00073077634392 -1.68090500464983 0.0927813677295351 1 FALSE Fusobacterium nucleatum_ss_animalis (SP71) 0.86423396875133 1.02841878540071 0.840352180473436 0.400710952497979 1 FALSE Veillonellaceae_[G-1] sp._Oral_Taxon_G40 (SP72) -0.067297040419551 1.13809087772225 -0.0591315172952073 0.952847355382386 1 FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP73) 1.02794047707121 1.36400001581147 0.753622041902743 0.451076205045985 1 FALSE Prevotella oris (SP74) 3.15422001305294 1.40541612768879 2.24433173272322 0.0248110652955464 1 FALSE Mycoplasma faucium (SP75) 0.775255917833385 1.02605409118431 0.755570222363766 0.449906915009734 1 FALSE Selenomonas sp._HMT_126 (SP79) 0.593199586785079 1.10181572013387 0.53838366611161 0.590312200587945 1 FALSE Filifactor alocis (SP84) 0.493161215688879 1.2395687637747 0.397849018223981 0.690741482026801 1 FALSE Prevotella nigrescens (SP9) 3.76684508683455 1.09544235179058 3.43865204835048 0.000584618128625375 0.0707387935636704 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346_nov_97.968% (SPN10) -0.0323187273788506 1.18250947550098 -0.0273306286743778 0.978196027838499 1 FALSE Prevotella nigrescens_nov_96.739% (SPN13) -1.44147587646421 0.657260194276288 -2.19315864404572 0 0 TRUE Treponema sp._HMT_927_nov_94.839% (SPN14) -0.624791489080388 1.04243819705681 -0.599355905073707 0.548935574977812 1 FALSE Selenomonas sp._HMT_138_sp._HMT_892 (SPP11) -1.08952218324422 1.22183649418525 -0.891708660225232 0.372549110455458 1 FALSE Lautropia dentalis_mirabilis (SPP13) -1.71832559832885 0.920744761951024 -1.86623445425612 0 0 TRUE Prevotella sp._HMT_292_sp._HMT_300 (SPP18) 1.43843589069537 0.820004128896206 1.75418127788164 0 0 TRUE Oribacterium sp._HMT_078_sp._Oral_Taxon_78 (SPP33) 0.119682034649565 1.14637919111186 0.104400041083689 0.916851890081273 1 FALSE Catonella morbi_sp._HMT_164 (SPP35) 0.559475229904011 1.14828548079691 0.487226599360759 0.626097757333607 1 FALSE Capnocytophaga endodontalis_sp._HMT_326 (SPP36) -1.0525691311813 1.06850200747643 -0.985088585530355 0.324580559647547 1 FALSE Streptococcus cristatus_gwangjuense_infantis_infantis_clade_431_ ...(20 species) (SPP4) 0.289037755024456 1.38690300488222 0.208405168931767 0.834912620712249 1 FALSE Veillonella dispar_parvula (SPP41) -0.613673420011122 1.44202543122293 -0.425563521089007 0.670425926239784 1 FALSE Aggregatibacter segnis_sp._HMT_512 (SPP49) -2.10788939745391 0.850901043769766 -2.47724387328905 0 0 TRUE Eubacterium_[XI][G-7]_Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsps._yurii_&_margaretiae_yurii (SPP58) -2.17889638360542 1.02285714069091 -2.13020596613681 0.0331546127259379 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_132_bacterium_HMT_150 (SPP61) 0.604895034386776 0.970266200272303 0.623432037740791 0.533000650108438 1 FALSE Selenomonas sp._HMT_134_sputigena (SPP63) -0.252705411059833 0.932944136260486 -0.270868748982925 0.786491981475204 1 FALSE Neisseria flavescens_flavescens|subflava (SPP65) -0.171693520581964 0.794787214420726 -0.21602451255724 0.828968640397385 1 FALSE Neisseria flava_macacae_mucosa_sicca_sp._TM101 (SPP69) -1.02001014268788 1.26202464411879 -0.80823314143766 0.41895638260861 1 FALSE Porphyromonas catoniae_sp._HMT_275_sp._HMT_284 (SPP79) -1.44879170165248 1.08294938445725 -1.33782032885922 0.180955013373567 1 FALSE Fusobacterium nucleatum_nucleatum_ss_vincentii (SPP87) -0.592288338121012 0.799713283999581 -0.740625859256481 0.458920324297446 1 FALSE Fusobacterium nucleatum_nucleatum_subsp._vincentii (SPP90) -0.354024936426859 1.19758188585123 -0.295616475674415 0.767522989943264 1 FALSE Fusobacterium nucleatum_nucleatum_ss_nucleatum_nucleatum_subsp._nucleatum (SPP91) 1.21049738393422 1.42086286275225 0.851945262042709 0.394244473660227 1 FALSE Fusobacterium nucleatum_nucleatum_ss_animalis (SPP92) 1.29061200091951 1.29124941369891 0.999506359675646 0.317549459840396 1 FALSE Fusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP94) -0.106609143845663 1.26459298858313 -0.0843031274158096 0.932815425937901 1 FALSE Campylobacter rectus_showae (SPP97) -0.495757506443446 1.26193304562572 -0.392855633792861 0.694426111470476 1 FALSE Selenomonas infelix_sp._HMT_479_sp._HMT_481 (SPP98) -0.892081910773055 1.00847028875434 -0.884589184947582 0.376378241793308 1 FALSE