taxon lfc_(Intercept) lfc_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER se_(Intercept) se_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER W_(Intercept) W_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER p_(Intercept) p_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER q_(Intercept) q_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER diff_(Intercept) diff_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER passed_ss_(Intercept) passed_ss_Age_HIV_Shedding_AgeADULT HIV-Pos NON-SHEDDER Lachnospiraceae_[G-3] -0.057786159112959 0.28115438774592 0.398071752550054 0.621062538478669 -0.145165183770966 0.452698996198716 0.885845099165513 0.655006861877512 1 1 FALSE FALSE TRUE TRUE Butyrivibrio 0.541689733433418 -0.700732201707838 0.283515652295664 0.473974365006835 1.91061667688286 -1.4784179344757 0.0671406789123604 0.151309550430723 1 1 FALSE FALSE FALSE FALSE Oribacterium 0.435924491287134 -0.419320175384853 0.356459893852925 0.510735751407204 1.22292717583257 -0.821011989525937 0.231550846707661 0.418575062790519 1 1 FALSE FALSE TRUE TRUE Fusobacterium 0.430660645558563 -0.410547099170568 0.196595419887299 0.443344180335104 2.19059348282602 -0.926023431412257 0.0369692026325363 0.36234706029922 1 1 FALSE FALSE FALSE TRUE Treponema 0.378098405004922 -0.401902247226307 0.38592776436785 0.627588038125351 0.979712889079768 -0.640391822041123 0.336256728961771 0.527521922847322 1 1 FALSE FALSE TRUE TRUE Peptoniphilaceae_[G-1] -0.0763590763023736 0.0342941019119547 0.170592957270753 0.342143107214895 -0.447609781341569 0.10023320998957 0.677605837537823 0.924982024383482 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-9] 0.0748273306209088 0.0571103265137787 0.382947217543994 0.517618825664007 0.195398548919636 0.110332784825816 0.846725808779196 0.913062907161182 1 1 FALSE FALSE TRUE TRUE Romboutsia -0.248682386338514 0.72169128732456 0.245100878169981 0.437378849481278 -1.01461238407334 1.65003700608859 0.318978324733816 0.110110434751448 1 1 FALSE FALSE TRUE FALSE Eikenella -0.296021128398096 0.800589190757196 0.358807987393473 0.520063623635515 -0.825012649658426 1.53940624641397 0.416338038476986 0.134931190498818 1 1 FALSE FALSE TRUE TRUE Prevotella 0.112242737515941 0.120149414233802 0.28757714905865 0.506091857277409 0.390304785631802 0.237406337418986 0.699264771038534 0.814070116978957 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-6] -0.206367588213404 0.163887143867663 0.168005233733438 0.462900458043509 -1.2283402345717 0.354044030460343 0.2590120205089 0.733730381948262 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-1] -0.453107926372164 1.01172053730315 0.284149148556927 0.448908590884174 -1.59461300050803 2.25373396243198 0.122884208901517 0.0328693343968269 1 1 FALSE FALSE TRUE FALSE Centipeda 0.685128177410454 -0.96923913096328 0.329318222969414 0.478016603637405 2.08044417109006 -2.02762649579111 0.049338930335895 0.0548811466752314 1 1 FALSE FALSE FALSE TRUE Bulleidia 0.999256948514327 -1.2745328870155 0.277262636712889 0.441312513241489 3.60400867697539 -2.88805064160524 0.00260416545910133 0.0112642809562736 0.244791553155525 1 FALSE FALSE FALSE FALSE Leptotrichia 0.138564825690771 0.0762792672757517 0.20861200548454 0.386363322415954 0.664222681570643 0.197428852197389 0.511981023325689 0.844918195484102 1 1 FALSE FALSE TRUE TRUE Shuttleworthia 0.4232832973931 -0.499453667973613 0.384615775796419 0.548971099297206 1.10053545389971 -0.909799566157517 0.281583175680499 0.371616764438646 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-2] 0.134866607269191 -0.130922985475781 0.294427567632894 0.473415993629485 0.458063789180736 -0.27654956156434 0.651205003572617 0.784595992053111 1 1 FALSE FALSE TRUE TRUE Cardiobacterium 0.0365025902375439 0.248625271403021 0.28188518203367 0.468369790035753 0.129494533817616 0.530831143878947 0.898002598085007 0.600220295798553 1 1 FALSE FALSE TRUE TRUE Filifactor 0.245195081672788 -0.145889105250995 0.522576998190935 0.756826755112612 0.469203739394594 -0.192764201668964 0.644263349722658 0.849189163560019 1 1 FALSE FALSE TRUE TRUE Schaalia 0.0953362678232863 0.14832686372156 0.345763134416625 0.504554389007159 0.275727104291031 0.293975965630646 0.784782447074931 0.770944518879625 1 1 FALSE FALSE TRUE TRUE Clostridioides -0.283933527653251 0.780443189515788 0.28443795027938 0.452938132192063 -0.998226598716401 1.72306797340889 0.326718577153274 0.0959047711433234 1 1 FALSE FALSE TRUE FALSE Veillonellaceae_[G-1] 0.0646546040666968 -0.0231266557630591 0.45064388945952 0.58959808597175 0.143471609354873 -0.0392244417227758 0.88735344470795 0.969100355043022 1 1 FALSE FALSE FALSE FALSE Erysipelotrichaceae_[G-1] 0.101260196591642 -0.152168486770755 0.325265530041547 0.461506061780045 0.311315486085194 -0.329721534282422 0.759346002963869 0.745638360234905 1 1 FALSE FALSE TRUE TRUE Dialister 0.467482371953988 -0.471916643162944 0.322573010409784 0.514257379015852 1.44922965303302 -0.917666255107633 0.158381862815782 0.366631005634638 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-8] -0.0492905354228675 0.190999125707235 0.404027439347029 0.60796352030094 -0.121997989796259 0.31416214843399 0.904252316226579 0.757009891360008 1 1 FALSE FALSE TRUE TRUE Lautropia -0.0647863464811439 0.415197887562277 0.698725417992034 0.841551862537141 -0.0927207524056073 0.493371717235018 0.926785662278495 0.62559759885 1 1 FALSE FALSE TRUE TRUE Peptidiphaga 0.302809206929297 -0.224681761179192 0.346163759208949 0.531047318003113 0.87475710230694 -0.423091791563995 0.389715328592351 0.675707435164856 1 1 FALSE FALSE TRUE TRUE Mitsuokella 0.133938468241567 -0.0646602461982676 0.174598621966009 0.371900210176499 0.767122138384589 -0.173864505662905 0.459157710836457 0.865130306495751 1 1 FALSE FALSE TRUE TRUE Cryptobacterium 0.411003925894398 -1.0579510066029 0.280438910028273 0.426697868351425 1.46557382444883 -2.47939135644237 0.164861267486381 0.026500182681726 1 1 FALSE FALSE FALSE TRUE Johnsonella 0.0887715756257534 0.00436511553652582 0.152085784530904 0.373913760454672 0.583694103295465 0.0116741238172618 0.570234955768337 0.990877449947108 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-3] -0.0708214099886576 0.0548457041680669 0.246613557943853 0.421663332089362 -0.287175654814492 0.1300698922439 0.778876487457042 0.898666048355638 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum 0.172177010815368 0.0202589587347562 0.257541255570923 0.421390018704301 0.668541474777244 0.0480765035608791 0.509262470225411 0.961996562054161 1 1 FALSE FALSE TRUE TRUE Corynebacterium -0.103630416932915 0.479938004981895 0.335221821934573 0.516453641514535 -0.30913982966521 0.929295422478665 0.759503876339184 0.360678854533293 1 1 FALSE FALSE TRUE TRUE Scardovia -0.619024152380841 1.65185940912028 0.259239178552842 0.484777924129172 -2.38784953661879 3.40745592342636 0.028118891295468 0.00313923650360057 1 0.298227467842054 FALSE FALSE FALSE FALSE Haemophilus -0.222140536507343 0.677454870939275 0.277381321901458 0.468612755408227 -0.800848935986614 1.44566033066923 0.429962597638704 0.159373270775024 1 1 FALSE FALSE TRUE TRUE Weeksellaceae_[G-1] -0.311156609201089 0.766164505440917 0.279335535939756 0.461282913388345 -1.11391702510846 1.66094273861798 0.276820585548409 0.11029778535063 1 1 FALSE FALSE TRUE TRUE Abiotrophia -0.485576482114392 1.09057590998154 0.324626789262175 0.555518803485707 -1.49579917054298 1.96316650874556 0.146746650041337 0.0604075364437988 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-1] 0.126602020763381 0.0962172754880677 0.407168538401361 0.640423533212643 0.310932719066288 0.150240068483118 0.758154803076247 0.881652279193859 1 1 FALSE FALSE TRUE TRUE Lancefieldella 0.430975904695329 -0.411072531065179 0.2882500406953 0.482772941209041 1.49514603243682 -0.85148212746908 0.146062699873407 0.401725483491434 1 1 FALSE FALSE TRUE TRUE Kingella -0.0183830810815833 0.337859111896342 0.324367252036424 0.556751499639061 -0.0566736653166178 0.606840057216505 0.955207651895145 0.54884654924526 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-4] -0.267284048670145 0.307217032776523 0.219221441813151 0.436610222524558 -1.21924227146521 0.703641410409816 0.244413201943691 0.494066972250797 1 1 FALSE FALSE TRUE TRUE Stomatobaculum 0.0489935210630906 0.225564774988553 0.349266754248019 0.525686706456591 0.140275363936585 0.429085940766849 0.889446671374888 0.67114421512729 1 1 FALSE FALSE TRUE TRUE Fannyhessea -0.622546702248436 2.02639761719511 0.267520773013859 0.396199612217422 -2.32709667826874 5.11458758339997 0.102418600594204 0.0144637597013037 1 1 FALSE FALSE TRUE FALSE Bacteroidetes_[G-5] 0.121735203404876 -0.0952216237228501 0.26056564119564 0.42774696864422 0.467195915955297 -0.222612036327605 0.647074229838804 0.826840277782281 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-5] 0.433989776657609 -0.536670013866489 0.275639666862046 0.530329883034648 1.57448230001967 -1.01195506991905 0.141358614673553 0.33152956812628 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-2] 0.228131066609656 -0.18044770041504 0.354361900445114 0.52333475696941 0.643779893727572 -0.344803585108695 0.525356814776544 0.733015730008557 1 1 FALSE FALSE TRUE TRUE Desulfobulbus -0.403202169728076 0.925542487208124 0.337017324077889 0.508221270461982 -1.19638410527196 1.82114079240877 0.254650269970622 0.0935950848356513 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia 0.808038866028376 -1.03951079995359 0.375462615649038 0.634116894302889 2.15211537007905 -1.63930469175777 0.0401560609130828 0.112339030922673 1 1 FALSE FALSE FALSE TRUE Capnocytophaga -0.220399222500526 0.674552680927913 0.282614636746094 0.443500506189284 -0.779857777495566 1.52097386928352 0.442017229863338 0.139480137414123 1 1 FALSE FALSE TRUE FALSE Parvimonas 0.358222488989363 -0.289816838221902 0.487920244619475 0.664495323654959 0.73418246719551 -0.436145790504299 0.468941535495736 0.666075404511825 1 1 FALSE FALSE TRUE TRUE Solobacterium 0.0185612896118683 0.276285160740589 0.364791588614166 0.568570627676481 0.0508819013135204 0.485929359153945 0.959780882385406 0.630798522949384 1 1 FALSE FALSE TRUE TRUE Ottowia -0.194792611899172 0.454396974112084 0.329452265645254 0.517017694294354 -0.591262019454191 0.878880895425179 0.562125066649207 0.391719522934932 1 1 FALSE FALSE TRUE TRUE Anaeroglobus 0.183210327487499 -0.207542864917466 0.291746272681539 0.511548007647809 0.62797829704404 -0.405715322539884 0.536788215832731 0.689055853477902 1 1 FALSE FALSE TRUE TRUE Bacteroidales_[G-2] 0.360998023439404 -0.483585076355904 0.417673802085578 0.601409848594848 0.864306120318838 -0.804085728701927 0.395976305703059 0.429240630904952 1 1 FALSE FALSE TRUE TRUE Actinomyces -0.0162512315804281 0.334306029394418 0.364347532369755 0.544423589600758 -0.0446036548531792 0.614055003824456 0.96473981564262 0.544136347095107 1 1 FALSE FALSE TRUE TRUE Limosilactobacillus 0.455228616276729 -0.727944331557323 0.339212953835091 0.470776935100471 1.34201424541717 -1.54626167359276 0.209266206851521 0.153077828875751 1 1 FALSE FALSE TRUE TRUE Alloprevotella -0.152573990964779 0.561510628368334 0.303691214315098 0.538654109253488 -0.50239843555854 1.0424326459637 0.619315765585418 0.306128552202759 1 1 FALSE FALSE TRUE TRUE Mycoplasma 0.124684551604593 -0.17631674546905 0.246526521861616 0.470369136316614 0.50576526477984 -0.374847607667795 0.620890996335705 0.71339108065383 1 1 FALSE FALSE TRUE TRUE Rothia -0.0782315909164139 0.437606628287727 0.278620300704436 0.448145400991553 -0.280782092039313 0.976483586174246 0.780941894265283 0.337186561955818 1 1 FALSE FALSE TRUE TRUE Pseudoramibacter 0.105702822524056 -0.158223516223225 0.354288897603333 0.499578067610571 0.29835206025113 -0.316714296486215 0.769274211509185 0.755555223857319 1 1 FALSE FALSE TRUE TRUE Streptobacillus 1.11741502631514 -1.87293297511121 0.123251214140594 0.352665450624803 9.06615836693086 -5.31079234382901 0.000273010714875988 0.00316393289617256 0.0259360179132188 0.298227467842054 TRUE FALSE FALSE FALSE Granulicatella -0.060764644692893 0.408495051248525 0.200721421129925 0.401206124481057 -0.302731239898709 1.01816753614341 0.764332351983994 0.317315794199799 1 1 FALSE FALSE TRUE TRUE Cloacibacterium -1.04560017524979 1.44200930000855 0.297729708099951 0.477198189983024 -3.51191079292217 3.0218247476166 0.00659877537239754 0.0144365769476467 0.613686109632971 1 FALSE FALSE FALSE TRUE Pseudostreptobacillus 1.18983216525137 -1.33954760286205 0.246271681185818 0.410551628984354 4.83138036627774 -3.26279938573353 0.0084528001518139 0.0309988442141522 0.777657613966879 1 FALSE FALSE FALSE FALSE Phocaeicola -0.278267323241817 0.36678843602104 0.241613886085186 0.42020724644553 -1.15170252732787 0.872875085148218 0.270184640932772 0.398567452554765 1 1 FALSE FALSE TRUE TRUE Peptostreptococcus -0.320332609241632 0.841108325496422 0.390483669961754 0.548142087220515 -0.82034828568633 1.53447134439441 0.418946902086492 0.13613707545093 1 1 FALSE FALSE TRUE TRUE Catonella 0.298110418058076 -0.226908888453574 0.195270479661417 0.391382474861967 1.52665379106445 -0.579762516279249 0.138477716328348 0.566881625480466 1 1 FALSE FALSE TRUE TRUE Megasphaera 0.114159034975634 0.116955585134313 0.387295428354632 0.595950165714366 0.294759572713321 0.196250612656712 0.770351998416737 0.845831443635656 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-2] 0.233248025347706 -0.263226247835942 0.388639543435907 0.549610361119753 0.600165447101944 -0.478932470086 0.554263894534774 0.636508581697902 1 1 FALSE FALSE TRUE TRUE Riemerella -0.204344321963248 0.647794513365784 0.308721418833737 0.519381521061589 -0.661905230726147 1.24724212760155 0.513443075123865 0.222640631034583 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] -0.999097557866385 1.71701765017208 0.46544990369106 0.687887171412268 -2.14652006573307 2.49607453304726 0.0431150151198663 0.020542446928961 1 1 FALSE FALSE FALSE FALSE Streptococcus -0.115622399472135 0.499924642547263 0.183993034330776 0.367565644903068 -0.628406395343606 1.36009621540963 0.534830590095155 0.184650379440399 1 1 FALSE FALSE TRUE FALSE Morococcus_Neisseria -0.666083235784389 1.41735936973435 0.475197196876044 0.615070808298782 -1.40169857937554 2.30438406539665 0.1719936409984 0.0288312941575029 1 1 FALSE FALSE TRUE TRUE Kingella_Neisseria -0.556372183095019 1.20784488057297 0.561592504301169 0.685463762890373 -0.990704432188521 1.76208422087827 0.330625908185516 0.0893749352701382 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter_Peptostreptococcaceae_[G-7] -0.109009479393518 0.259887158899618 0.439698862422936 0.625789715436986 -0.247918493108731 0.41529471080895 0.806725064244519 0.682347679974776 1 1 FALSE FALSE TRUE TRUE Mogibacterium 0.351002096774678 -0.277782851197427 0.343962350221805 0.538815618827102 1.02046661952488 -0.515543428013662 0.316243845910155 0.610220238924214 1 1 FALSE FALSE TRUE TRUE Parvimonas_Peptostreptococcus -0.676606904153468 1.34221214252518 0.405201733030419 0.566665254229828 -1.66980259213915 2.36861556713835 0.109798517679299 0.0275228487114864 1 1 FALSE FALSE TRUE FALSE Porphyromonas -0.280842336807243 0.775291204772442 0.289553151675322 0.497029918433019 -0.969916352774336 1.55984816209192 0.34039253470489 0.130028423079369 1 1 FALSE FALSE TRUE TRUE Aggregatibacter -0.627520008258952 1.35308732385862 0.477502949051467 0.626471666415172 -1.31416991142251 2.15985398286458 0.199453884867862 0.0394960538053781 1 1 FALSE FALSE TRUE TRUE Moraxella 0.159312615817358 0.0881537195174468 0.122617009987414 0.414647409360637 1.29927010806829 0.21259922895304 0.263678515122666 0.842034407501316 1 1 FALSE FALSE TRUE TRUE Fretibacterium -0.333615713600556 0.697238506507495 0.421046782027333 0.556698469638862 -0.792348327647113 1.25245270920145 0.437455802860455 0.224852945904157 1 1 FALSE FALSE TRUE TRUE Campylobacter 0.406538207772159 -0.370343036193228 0.19151536687082 0.34324434056996 2.12274458397051 -1.07894870335887 0.0427516065926445 0.289817825905394 1 1 FALSE FALSE TRUE FALSE Eikenella_Neisseria -0.56867873944464 1.16626861514369 0.327978356706256 0.535457131692095 -1.73389105657957 2.17808027219316 0.0983266891189957 0.0415396657032636 1 1 FALSE FALSE TRUE FALSE Eikenella_Kingella 0.0896792879150861 0.0401068312478391 0.193903172278034 0.416377148508973 0.462495207589985 0.0963233246383953 0.649268036029883 0.924328135623286 1 1 FALSE FALSE TRUE TRUE Tannerella 0.136616500769464 0.0394135328127615 0.309697914693316 0.51037886311727 0.441128255270143 0.0772240695314717 0.662632480687662 0.93901472471229 1 1 FALSE FALSE TRUE TRUE Hallella_Prevotella -0.454309081588905 0.698953770929854 0.375123438445562 0.568245104605224 -1.21109222999094 1.2300216319777 0.243445474810409 0.236468668105438 1 1 FALSE FALSE TRUE TRUE Lactobacillus 0.510310999865096 -1.04838996071842 0.193216024495035 0.340725668943768 2.64114221995189 -3.07693272411313 0.0775799700915572 0.0542662768871634 1 1 FALSE FALSE TRUE TRUE Selenomonas 0.427416356209577 -0.405139950255593 0.333795105800568 0.484365715983677 1.28047520404612 -0.836433993749562 0.210884218326089 0.409992680207054 1 1 FALSE FALSE TRUE TRUE Gemella -0.262785034076758 0.745195700221634 0.222333831958199 0.439920106323309 -1.18193903178066 1.6939341701149 0.247170816918063 0.101375128309869 1 1 FALSE FALSE TRUE FALSE Bifidobacterium 0.044401263339389 -0.514598014760453 0.423192734012144 0.559528108385133 0.104919720427229 -0.91970002408931 0.918740595644118 0.381718572857451 1 1 FALSE FALSE TRUE TRUE Veillonella 0.0082196885207879 0.293521162559056 0.232081858656219 0.440397101254729 0.0354171953309097 0.666492040303601 0.971998364776674 0.510551534309531 1 1 FALSE FALSE TRUE TRUE Centipeda_Selenomonas -0.0208412161520777 0.144579699589259 0.341724563545055 0.469015992680492 -0.0609883466844485 0.308261768992067 0.952123818560473 0.761860194100016 1 1 FALSE FALSE TRUE TRUE Neisseria -0.434092681714323 1.03070844628424 0.325610017741063 0.47445125065488 -1.33316746433621 2.17242223486937 0.193222962800355 0.0384448013964937 1 1 FALSE FALSE TRUE TRUE Mesocricetibacter_Pasteurella_Rodentibacter -0.133543238097718 0.396609835701271 0.327762685430696 0.478673403782748 -0.407438808729054 0.82856041837093 0.689085073316903 0.419541983819165 1 1 FALSE FALSE TRUE TRUE Peptococcus 0.14468649972427 -0.045690944035464 0.356265941256336 0.518742993815211 0.406119370305362 -0.0880801178622574 0.688110245653787 0.930514767427881 1 1 FALSE FALSE TRUE TRUE