taxon lfc_(Intercept) lfc_GroupGroup2 se_(Intercept) se_GroupGroup2 W_(Intercept) W_GroupGroup2 p_(Intercept) p_GroupGroup2 q_(Intercept) q_GroupGroup2 diff_(Intercept) diff_GroupGroup2 Capnocytophaga sputigena (SP1) 0.17059279969561 -0.348977592768438 1.53545602629827 2.05828765646437 0.111102367488101 -0.169547532227782 0.911535171382982 0.865365988186658 1 1 FALSE FALSE Schaalia sp._HMT_172 (SP103) 0.547262142036058 -1.02698240898124 0.992708432291847 1.32998669507076 0.551281850978745 -0.772174949409252 0.581440477840083 0.440010816244273 1 1 FALSE FALSE Abiotrophia defectiva (SP106) -0.17750557552802 0.277599482634098 1.19217095246504 1.59765095673972 -0.148892719757174 0.173754775073391 0.881638285972493 0.862058187910287 1 1 FALSE FALSE Oribacterium sinus (SP108) 0.114514196667382 -0.248036107317627 0.884946593965482 1.18537184498021 0.129402381395966 -0.209247510279585 0.897039263443892 0.834255025388703 1 1 FALSE FALSE Veillonella dispar (SP11) -1.73801589649982 3.08651806038333 1.042903795417 1.39734659129563 -1.66651603353776 2.20884215813737 0.0956106774131235 0.0271856215713881 1 0.951496754998584 FALSE FALSE Haemophilus parainfluenzae (SP19) -0.277688247672095 0.457928292493433 1.53908851214218 2.06316176563856 -0.180423832340607 0.221954623297171 0.856819845825481 0.824349207609853 1 1 FALSE FALSE Enterococcus faecalis (SP2) 7.05944376055984 -12.7489093223241 0.481281322929719 0.643685943784636 14.6680193563022 -19.8061017883429 1.03317080863762e-48 2.63729694434477e-87 5.47580528577937e-47 1.39776738050273e-85 TRUE TRUE Schaalia odontolytica (SP22) -1.36932843186776 2.42288062404563 1.18355143315519 1.5860844658349 -1.15696571649389 1.52758612560413 0.247286367504349 0.126615328707024 1 1 FALSE FALSE Streptococcus sp._HMT_074 (SP23) -2.22542528048423 3.96385495155528 0.796921426132602 1.06724002287781 -2.79252785470213 3.71411759921331 0.00522979646714082 0.000203913958752213 0.251030230422759 0.00978787002010621 FALSE TRUE Streptococcus peroris (SP25) -2.04541316399126 3.63983314186793 0.846337261198185 1.13355755883796 -2.41678259692301 3.21098219802725 0.015658366224359 0.0013228212923497 0.720284846320513 0.060849779448086 FALSE FALSE Rothia mucilaginosa (SP29) -3.34704041579958 5.9827621951229 0.533252167066478 0.71340135068232 -6.27665600350447 8.38625016535334 3.45932277497069e-10 5.01894707321047e-17 1.79884784298476e-08 2.60985247806945e-15 TRUE TRUE Mixta calida (SP35) 3.72538403879795 -6.74760182315264 1.93086811403128 2.58884416370913 1.92938296081759 -2.60641483088928 0.0536833374382844 0.00914955752460097 1 0.347683185934837 FALSE FALSE Veillonella atypica (SP41) -1.57517944315072 2.79341244435495 0.688906902202114 0.922279640643704 -2.28649101658817 3.02881286895295 0.0222255490804066 0.00245516708884696 0.955698610457483 0.103117017731572 FALSE FALSE Prevotella melaninogenica (SP44) -0.595030254443297 1.0291439046816 1.24821439182862 1.67285482771315 -0.476705170472827 0.615202160780725 0.633572080531658 0.538421220983217 1 1 FALSE FALSE Actinomyces graevenitzii (SP61) -0.680808527259279 1.18354479575036 1.408944305666 1.88853124613143 -0.483204711869336 0.62670119870921 0.628950390065627 0.530855117969942 1 1 FALSE FALSE Gemella sanguinis (SP62) -0.740132036279591 1.29032711198692 0.647868539719761 0.867204851751911 -1.14241083013498 1.48791500575698 0.253283291642741 0.136773309821022 1 1 FALSE FALSE Actinomyces oris (SP66) 0.570740930221304 -1.06924422771469 0.960059146300938 1.28617230866902 0.594485175648127 -0.831338243334738 0.552187654519103 0.405782575922741 1 1 FALSE FALSE Granulicatella adiacens (SP67) -1.30239661660684 2.30240335657597 0.801831244488493 1.07382918083079 -1.62427770875612 2.14410578300234 0.104316552488763 0.0320244118149416 1 1 FALSE FALSE Alloprevotella sp._HMT_308 (SP68) -0.0389428035968281 0.0281864931579509 0.727518483534374 0.974098172297677 -0.0535282669488193 0.0289359881370739 0.957311009160079 0.976915643247732 1 1 FALSE FALSE Alishewanella aestuarii (SP78) 1.94524403833546 -3.54334982232017 1.1757024891379 1.57555198594398 1.65453765413207 -2.24895773286541 0.0980183192134787 0.0245151853294589 1 0.882546671860522 FALSE FALSE Prevotella nanceiensis (SP8) -0.397491045601374 0.673573328766133 1.25598946829049 1.68328801679943 -0.316476416113896 0.40015334395765 0.751640923186719 0.689043576241983 1 1 FALSE FALSE Bifidobacterium longum (SP81) 0.0782724436437769 -0.182800951875138 0.520838159181974 0.696746344929149 0.150281699341522 -0.262363704101995 0.880542370822425 0.793041052716201 1 1 FALSE FALSE Prevotella sp._HMT_313 (SP83) 0.105819508122966 -0.232385667937678 0.832749149220507 1.11532198460671 0.127072490223518 -0.208357470887318 0.898883024549196 0.834949860868948 1 1 FALSE FALSE Streptococcus parasanguinis_clade_411 (SP9) -1.25543614944739 2.21787451568897 1.4055878121573 1.88402737858734 -0.893175181649127 1.17719866542064 0.371763366616116 0.239116221222739 1 1 FALSE FALSE Fusobacterium periodonticum (SP91) 0.647757283616853 -1.20787366382667 0.854716813033357 1.14480308671052 0.757861871603985 -1.05509294816577 0.448533678023548 0.291382816881423 1 1 FALSE FALSE Schaalia lingnae_[Not_Validly_Published] (SP92) -0.242879973900241 0.395273399704095 0.725490198013544 0.971376114990239 -0.334780503672232 0.406921061372882 0.737790668526743 0.684065966615566 1 1 FALSE FALSE Schaalia sp._HMT_180 (SP95) -1.66013230384807 2.94632759361018 1.28600475446745 1.72356465381167 -1.29092236874004 1.70943839390903 0.196730598023607 0.087369774150107 1 1 FALSE FALSE Corynebacterium lowii (SP98) 3.49181818240055 -6.32718328163733 1.77690295682661 2.38225912156093 1.96511473459227 -2.65595930533852 0.0494009595920383 0.00790831570880085 1 0.316857063424636 FALSE FALSE Rothia mucilaginosa_nov_93.627% (SPN29) -2.23673425877033 3.98421111247026 0.728133884885638 0.974924070699581 -3.07187222734681 4.08668862756798 0.0021272075941229 4.37573747165041e-05 0.106360379706145 0.00218786873582521 FALSE TRUE Schaalia sp._HMT_180_nov_95.735% (SPN48) -0.270739030326134 0.445419701270702 1.01710183690199 1.3627216566465 -0.266186747976766 0.326860367337837 0.790095388551399 0.743773498280808 1 1 FALSE FALSE Actinomyces graevenitzii_nov_96.698% (SPN56) 0.510128576693095 -0.96014199136391 1.04476146375078 1.39983947932933 0.48827277267836 -0.685894351132259 0.625356644370143 0.492779732606749 1 1 FALSE FALSE Rothia mucilaginosa_nov_90.443% (SPN66) -0.398914736858305 0.676135973028608 0.636172280453736 0.851508336427581 -0.627054571717252 0.794045042313114 0.530623463969337 0.427169209968862 1 1 FALSE FALSE Veillonella atypica_nov_92.774% (SPN67) -0.277626168251965 0.457816549537197 0.754883792600126 1.01082372612385 -0.367773385749491 0.452914328883793 0.713042215407568 0.650610432595923 1 1 FALSE FALSE Oxalophagus oxalicus_nov_88.152% (SPN69) -0.231795026105385 0.375320493673354 0.733272289983539 0.981820059047675 -0.316110439834824 0.382270142287986 0.751918682899125 0.702260999003685 1 1 FALSE FALSE Bifidobacterium cebidarum_nov_95.332% (SPN70) -0.249515444422644 0.407217246644419 0.487380671251683 0.651866103814564 -0.511951866662751 0.624694617900028 0.608684696970249 0.532171506194231 1 1 FALSE FALSE Prevotella nanceiensis_nov_94.575% (SPN71) 0.631567082374476 -1.1787313015904 0.876608092908882 1.1741815032482 0.720466862539134 -1.00387486800772 0.471237595432859 0.315438931709483 1 1 FALSE FALSE Enterococcus faecalis_nov_95.082% (SPN72) 1.63605623080179 -2.98681176875957 0.841629318972303 1.12723939411641 1.94391544343958 -2.64966943521415 0.0519056486087848 0.00805705607236678 1 0.316857063424636 FALSE FALSE Actinomyces graevenitzii_nov_93.381% (SPN90) -0.582634533083 1.00683160623306 1.11779994934325 1.49785208422697 -0.521233279197516 0.672183599993238 0.6022042737455 0.501466820220547 1 1 FALSE FALSE Streptococcus lactarius_peroris (SPP11) -2.3490921135994 4.18645525116258 0.544811539887704 0.728910690964978 -4.31175175563203 5.74344059300363 1.61966219214348e-05 9.27719207694928e-09 0.000826027717993175 4.73136795924413e-07 TRUE TRUE Streptococcus parasanguinis_parasanguinis_clade_721_sp._HMT_066 (SPP12) -0.958589020321017 1.68354968326149 1.23103931305996 1.64980793928054 -0.77868270342909 1.02045192241932 0.436166647441633 0.307514179653247 1 1 FALSE FALSE Streptococcus salivarius_sp._HMT_056_vestibularis (SPP13) 0.478955859078923 -0.904031099658401 1.08880463756544 1.45894260655394 0.439891457617102 -0.619648158602858 0.660015723164446 0.535489453289659 1 1 FALSE FALSE Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(5 species) (SPP14) 0.56858336512607 -1.06536061054327 0.963050200471836 1.29018623347297 0.590398470243295 -0.825741728522007 0.554923535943776 0.408950615710637 1 1 FALSE FALSE Streptococcus salivarius_vestibularis (SPP15) -0.126680281541731 0.186113953458776 1.48315644034792 1.98811122703008 -0.0854126227655486 0.0936134512638917 0.931933358319429 0.925416223977386 1 1 FALSE FALSE Streptococcus parasanguinis_clade_411_sp._HMT_056 (SPP16) 0.554550728978927 -1.04010186547841 0.98254983219159 1.3163541962624 0.564399596651494 -0.790138298971223 0.572482213312039 0.429447005094949 1 1 FALSE FALSE Streptococcus cristatus_downii_gwangjuense_infantis_infantis_cla ...(17 species) (SPP18) -1.86538786327137 3.31578760057212 0.990960807279751 1.32764144412501 -1.88240326919888 2.49750233035052 0.0597812823812309 0.012507164307609 1 0.462765079381533 FALSE FALSE Phyllobacterium brassicacearum_myrsinacearum (SPP20) 2.29600573489832 -4.17472087613331 1.00547772800945 1.34712260191694 2.28349735746383 -3.09899104223531 0.0224010883386909 0.00194180891036239 0.955698610457483 0.0834977831455828 FALSE FALSE Enterococcus canintestini_dispar_saigonensis (SPP22) 3.45944197146017 -6.26890610194464 1.75542586884349 2.35344169053448 1.97071379251083 -2.66371847118971 0.0487566220263339 0.00772822105913746 1 0.316857063424636 FALSE FALSE Atopobium_Lancefieldella parvula_parvulum (SPP3) 0.14308590206646 -0.299465177035967 0.668481244254196 0.89486763186866 0.214046247813723 -0.334647456641855 0.830510992287408 0.73789104166257 1 1 FALSE FALSE Schaalia odontolyticus_sp._HMT_180 (SPP4) -2.11409830031027 3.76346638724215 0.724804546221044 0.970455937130309 -2.91678399553737 3.8780394279115 0.00353660598971208 0.000105301654248192 0.173293693495892 0.00515978105816141 FALSE TRUE Veillonella dispar_parvula_tobetsuensis (SPP5) -0.0775713738967637 0.0977179196978352 0.918493001700442 1.23039114291964 -0.0844550516478109 0.0794202073545137 0.932694638697523 0.936698396262743 1 1 FALSE FALSE Enterococcus casseliflavus_gallinarum (SPP6) 3.84938770510408 -6.97080842250368 1.58209060918826 2.12086227042278 2.43310192396574 -3.28678034388065 0.0149700862387887 0.0010133984722993 0.703594053223068 0.047629728198067 FALSE TRUE Schaalia multispecies_sppn28_3_nov_93.365% (SPPN28) -1.69031854773991 3.0006628326155 0.711640196607711 0.952788748748594 -2.37524321391263 3.14934746716585 0.0175373902166011 0.00163635506653979 0.789182559747049 0.0719996229277509 FALSE FALSE multigenus multispecies_sppn29_3_nov_96.019% (SPPN29) 1.93976276858422 -3.53348353676793 0.833118053082399 1.11581706334449 2.32831681105386 -3.16672298071591 0.019895287287042 0.00154167102117971 0.875392640629846 0.0693751959530868 FALSE FALSE