taxon lfc: Caries Free plaque vs. Caries Free saliva se: Caries Free plaque vs. Caries Free saliva W: Caries Free plaque vs. Caries Free saliva p: Caries Free plaque vs. Caries Free saliva q: Caries Free plaque vs. Caries Free saliva diff: Caries Free plaque vs. Caries Free saliva Prevotella salivae (SP1) -0.562103337190186 0.104346937111559 -5.38686954068651 7.16954343876658e-08 7.38462974192958e-06 TRUE Fusobacterium sp._HMT_248 (SP10) -0.421016695655149 0.0874456788628894 -4.81460835034837 1.47488862902293e-06 0.00013888764570208 TRUE Leptotrichia buccalis (SP106) 0.212468543247442 0.137556680711345 1.54458905339026 0.122445695655576 1 FALSE Veillonella atypica (SP109) 0.111590484165663 0.112731625348753 0.989877364230671 0.32223406465782 1 FALSE Leptotrichia sp._HMT_215 (SP11) -1.54029593405696 0.118858557721525 -12.9590663355157 2.08773121921808e-38 3.17335145321148e-36 TRUE Bergeyella sp._HMT_907 (SP119) 0.166928261386545 0.0911865950270375 1.83062281618312 0.0671568606221226 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP12) 0.267732314356955 0.0929699621424161 2.87977222091184 0.00397962573312149 0.254696046919776 FALSE Prevotella oris (SP120) 0.0411536672859404 0.110273021138094 0.373197966839088 0.709001109276451 1 FALSE Veillonella dispar (SP121) 1.43871006353926 0.169787268455785 8.47360391991892 2.37915403053061e-17 3.11669177999509e-15 TRUE Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP122) -0.721684645226449 0.104946190512662 -6.87671121458552 6.12500968680305e-12 7.10501123669154e-10 TRUE Prevotella melaninogenica (SP124) -3.14736007420436 0.129709657212013 -24.2646549366785 4.63121421154886e-130 8.19724915444148e-128 TRUE Leptotrichia sp._HMT_225 (SP132) 0.518622531267447 0.158666727640386 3.26862814264935 0.00108070229053432 0.078891267209005 FALSE Schaalia lingnae_[Not_Validly_Published] (SP133) -1.20018435598299 0.0830014384827132 -14.4598018772043 2.17422764556633e-47 3.45702195645047e-45 TRUE Alloprevotella sp._HMT_914 (SP135) -1.36785968232193 0.124137148838165 -11.0189390937695 3.09687438235095e-28 4.5524053420559e-26 TRUE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_872 (SP136) 0.3533972674625 0.0789608463043975 4.47560131384786 7.61965554611961e-06 0.000662910032512406 TRUE Neisseria sp._HMT_018 (SP137) 0.431054841781809 0.108586742028818 3.96968205996467 7.19685991417186e-05 0.00568551933219577 TRUE Rothia aeria (SP141) 1.6438219886992 0.165370574423893 9.94023268302622 2.78176599458214e-23 3.86665473246917e-21 TRUE Corynebacterium durum (SP144) 2.54373699011091 0.16711533204947 15.2214459254876 2.54835905468977e-52 4.10285807805052e-50 TRUE Corynebacterium matruchotii (SP150) 1.82513552982196 0.185319749329755 9.84857542934805 6.95223530284611e-23 9.59408471792763e-21 TRUE Leptotrichia sp._HMT_392 (SP151) 0.0337244787561582 0.139942652953087 0.240987847839812 0.809564535030655 1 FALSE Bergeyella sp._HMT_900 (SP152) 0.196504582813112 0.0849700231605636 2.31263421503119 0.0207427587086296 1 FALSE Schaalia sp._HMT_172 (SP153) -0.270546649837336 0.0678594394423035 -3.98686832754292 6.6951156859459e-05 0.00535609254875672 TRUE Leptotrichia sp._HMT_221 (SP164) -0.925975873460759 0.124767068959284 -7.42163682440066 1.15681661550505e-13 1.43445260322626e-11 TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP165) -0.127064801965499 0.0979865189784568 -1.29675799579567 0.194714467444213 1 FALSE Prevotella micans (SP166) -0.0216287766262116 0.0640284986362923 -0.337799215769087 0.735514500911617 1 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP178) 0.0440445818200896 0.065186640633128 0.675668839386487 0.499250924233278 1 FALSE Simonsiella muelleri (SP179) -0.216101793949918 0.0581916806443874 -3.71362008378016 0.000204315447597287 0.0155279740173938 TRUE Cardiobacterium hominis (SP180) 1.81220462909631 0.141344763334649 12.8211656827054 1.24809883117507e-37 1.8721482467626e-35 TRUE Eikenella halliae (SP19) 1.02769062596351 0.0774313289532032 13.2722844855809 3.35203685749089e-40 5.19565712911088e-38 TRUE Cardiobacterium valvarum (SP192) 0.458272045934774 0.105410705958686 4.34749053017807 1.37704014288444e-05 0.00115671372002293 TRUE Streptococcus intermedius (SP197) 0.657362893198233 0.129600582956421 5.07222173081797 3.93197857309692e-07 3.81401921590402e-05 TRUE Alloprevotella sp._HMT_912 (SP199) 0.00348272776046255 0.0687265758534472 0.0506751241017613 0.959584399265199 1 FALSE Prevotella histicola (SP2) -1.49350067843292 0.114365124374546 -13.0590570036168 5.64223495269048e-39 8.63261947761643e-37 TRUE Leptotrichia hongkongensis (SP224) 1.09018896022125 0.171579232283874 6.35385148721001 2.099895808841e-10 2.37288226399033e-08 TRUE Kingella sp._HMT_012 (SP252) 1.29902558355878 0.139761724280678 9.29457324775127 1.47797901153229e-20 2.01005145568391e-18 TRUE Lachnoanaerobaculum orale (SP260) -0.416474369515765 0.0879580843206448 -4.73491860051815 2.19143032750077e-06 0.000203803020457571 TRUE Streptococcus sanguinis (SP261) 1.7747756341006 0.115730905364165 15.3353646419338 4.43773783743533e-53 7.18913529664523e-51 TRUE Actinomyces gerencseriae (SP273) 0.495860393901506 0.0913220224665262 5.42980083564468 5.64169767524589e-08 5.86736558225573e-06 TRUE Haemophilus parahaemolyticus (SP274) -1.08439657089268 0.116589684109368 -9.30096499682984 1.39176707995178e-20 1.90672089953393e-18 TRUE Tannerella serpentiformis (SP278) -0.00810708481583246 0.063160126375814 -0.128357640825382 0.897865951520902 1 FALSE Prevotella saccharolytica (SP279) 0.2641581343684 0.0822482709308971 3.21171656715238 0.0013194447972269 0.0945781094575136 FALSE Abiotrophia defectiva (SP280) 1.90224276369205 0.136564399870729 13.9292726764274 4.20616923679822e-44 6.60368570177321e-42 TRUE Capnocytophaga sp._HMT_332 (SP281) -0.00370291621128754 0.0975952013114018 -0.0379415807491647 0.969734260257902 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP289) 0.375727845619992 0.079354028508682 4.73483013630346 2.19238636743702e-06 0.000203803020457571 TRUE Capnocytophaga gingivalis (SP291) 1.1588113633555 0.13225825375791 8.7617319178932 1.9227310156225e-18 2.55723225077792e-16 TRUE Campylobacter concisus (SP292) -0.772278818472414 0.105963377091591 -7.28816728637182 3.14199696843261e-13 3.83323630148779e-11 TRUE Leptotrichia sp._HMT_498 (SP3) 0.163095334026463 0.1030558930839 1.58259104982656 0.113514704793237 1 FALSE Capnocytophaga leadbetteri (SP312) 1.05510544617509 0.152400145629833 6.92325746681271 4.41374507443326e-12 5.20821918783125e-10 TRUE Leptotrichia sp._HMT_212 (SP32) 0.849178856745372 0.158750261905016 5.34914932772493 8.83686073291845e-08 8.92522934024763e-06 TRUE Haemophilus pittmaniae (SP338) -0.749340942642597 0.0954257351124548 -7.85260854170559 4.07471970939793e-15 5.17489403093537e-13 TRUE Prevotella sp._HMT_472 (SP340) 0.115225794220007 0.0897463965780552 1.2839044085719 0.199175404530067 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP350) 0.425748296213179 0.0899318155332417 4.73412322089515 2.20004046146771e-06 0.000203803020457571 TRUE Leptotrichia sp._HMT_219 (SP368) -0.0097726163487673 0.0868774140521479 -0.112487422138294 0.910436942125677 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP371) 0.996155773996143 0.122739563818039 8.11601200956638 4.81753039042345e-16 6.21461420364625e-14 TRUE Neisseria oralis (SP374) 0.207464506450935 0.159570878252007 1.30014015541915 0.19355293707359 1 FALSE Leptotrichia sp._HMT_417 (SP375) -0.330514715705877 0.139013452105067 -2.37757361392675 0.0174269641257835 0.94105606279231 FALSE Streptococcus hongkongensis (SP382) -1.10687621551637 0.0735594620905218 -15.047366906439 3.59251023561422e-51 5.74801637698275e-49 TRUE Capnocytophaga sputigena (SP384) 1.65430684623014 0.150352668773373 11.0028432466582 3.70269745309628e-28 5.40593828152057e-26 TRUE Megasphaera micronuciformis (SP385) -0.437704303495142 0.0665139311826498 -6.5806410132817 4.68424328662766e-11 5.38687977962181e-09 TRUE Prevotella sp._HMT_317 (SP386) 0.263790986096746 0.143759895818264 1.83494141113054 0.0665143709595877 1 FALSE Leptotrichia sp._HMT_217 (SP387) -0.0294006995023538 0.106549083707778 -0.275935732896478 0.782597428060823 1 FALSE Alloprevotella sp._HMT_308 (SP391) -1.23954819388872 0.0986365282287123 -12.5668270786512 3.21364285734392e-36 4.78832785744243e-34 TRUE Rothia dentocariosa (SP394) 1.57027511180508 0.171179503109934 9.17326597680696 4.58900407033319e-20 6.1951554949498e-18 TRUE Veillonella denticariosi (SP395) 0.576598637656145 0.132674636048225 4.34595982194036 1.38667952017333e-05 0.00115671372002293 TRUE Actinomyces massiliensis (SP397) 1.46549156164254 0.142657008912881 10.2728325289471 9.3420700226027e-25 1.31723187318698e-22 TRUE Leptotrichia trevisanii (SP4) -0.0821973852783913 0.0889390922898721 -0.924198607857295 0.355382920323187 1 FALSE Granulicatella adiacens (SP401) -0.351111428045147 0.105522885233591 -3.32734863407032 0.000876766067782347 0.0648806890158937 FALSE Prevotella nanceiensis (SP475) -2.17383990997139 0.110899188857731 -19.60194598682 1.48822424161861e-85 2.559745695584e-83 TRUE Prevotella sp._HMT_313 (SP476) -0.442184612052403 0.076707153095837 -5.76458119231648 8.18608625598207e-09 8.84097315646064e-07 TRUE Gracilibacteria_(GN02)_[G-2] bacterium_HMT_873 (SP478) 0.178494476546248 0.0642351396014627 2.77876685025813 0.00545656742294055 0.338307180222314 FALSE Oribacterium sinus (SP490) -1.38985808866252 0.0813788275573628 -17.0788659701791 2.13222718687112e-65 3.58214167394348e-63 TRUE Prevotella sp._HMT_309 (SP491) -0.187809794039529 0.0708611301804149 -2.65039230338775 0.00803983551531846 0.490429966434426 FALSE Peptidiphaga sp._HMT_183 (SP494) 0.247593389003228 0.079098271498721 3.13019974156112 0.0017468747946172 0.122281235623204 FALSE Campylobacter gracilis (SP495) 0.44005708360837 0.11169467712609 3.93982143940126 8.15422787771327e-05 0.00636029774461635 TRUE Capnocytophaga granulosa (SP499) 1.00452807556402 0.144703386189613 6.94198043332396 3.86640779232237e-12 4.63968935078684e-10 TRUE Selenomonas noxia (SP512) 0.481599288832076 0.103359037659832 4.65947922635543 3.17010385597917e-06 0.000285309347038126 TRUE Alloprevotella sp._HMT_473 (SP513) -2.66615516520705 0.157540158073234 -16.9236542467328 3.01151788215068e-64 5.02923486319164e-62 TRUE Bergeyella sp._HMT_206 (SP520) -2.49045050364012 0.149439545257473 -16.6652708916456 2.34424115141426e-62 3.86799789983353e-60 TRUE Leptotrichia hofstadii (SP528) 0.0356609672193038 0.137415156494616 0.259512619488236 0.795239746518246 1 FALSE Actinomyces graevenitzii (SP532) -0.546545327323001 0.0673712764439815 -8.11243835906014 4.96139420090379e-16 6.35058457715685e-14 TRUE Ottowia sp._HMT_894 (SP55) 0.18807713650317 0.0868341667123557 2.16593471929303 0.030316175751041 1 FALSE Kingella oralis (SP566) 1.65331592965157 0.154463908538475 10.7035743514139 9.79263585732305e-27 1.41013956345452e-24 TRUE Acinetobacter johnsonii (SP567) 0.386143814022917 0.0606889718061778 6.36266857932844 1.98278224606745e-10 2.26037176051689e-08 TRUE Prevotella pallens (SP568) -0.476947355788882 0.0805542909134568 -5.92081874696517 3.20342765572178e-09 3.52377042129396e-07 TRUE Prevotella nigrescens (SP575) -0.240481382116497 0.0984866670375099 -2.44176586892627 0.0146156219735835 0.818474830520674 FALSE Rothia mucilaginosa (SP59) -3.37775289115155 0.108455393613755 -31.144167003633 6.08367515697123e-213 1.11939622888271e-210 TRUE Leptotrichia shahii (SP6) 1.09234609676718 0.179466866809507 6.08661707972335 1.15321335439504e-09 1.28006682337849e-07 TRUE Granulicatella elegans (SP602) -2.72029594176169 0.109241978607975 -24.9015623519942 7.15581871244208e-137 1.28089154952713e-134 TRUE Prevotella oulorum (SP627) 0.152196966597948 0.121679881790781 1.25079811352577 0.211008143336206 1 FALSE Prevotella maculosa (SP631) 0.000796013653639745 0.0821324331696899 0.00969183089943457 0.992267158819292 1 FALSE Lautropia mirabilis (SP652) 1.98954533698204 0.150553832366933 13.2148435260889 7.20359622577898e-40 1.10935381876996e-37 TRUE Lachnoanaerobaculum saburreum (SP654) 0.539129015301999 0.11193692668041 4.81636428022776 1.46197521791663e-06 0.00013888764570208 TRUE Actinobacillus porcinus (SP661) -0.523920486996019 0.0584967283893976 -8.95640664736695 3.35431198534537e-19 4.4947780603628e-17 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP667) 0.030559415833889 0.064086765454981 0.476844409558415 0.633472919605983 1 FALSE Fusobacterium periodonticum (SP687) -2.49669692398529 0.12948483905123 -19.2817703005175 7.64159564750082e-83 1.30671285572264e-80 TRUE Veillonella sp._HMT_780 (SP75) -2.50532137414672 0.134956663903231 -18.563895265988 6.29690031223095e-77 1.06417615276703e-74 TRUE Prevotella veroralis (SP764) 0.0174629364293236 0.0676758526247642 0.25803792271593 0.796377639889454 1 FALSE Fusobacterium nucleatum (SP79) 0.249707029397487 0.138916458028319 1.79753380514915 0.072250916389316 1 FALSE Bergeyella sp._HMT_322 (SP797) 0.495418285207653 0.110603729070147 4.4792186427408 7.49167664545553e-06 0.000659267544800087 TRUE Streptococcus mutans (SP8) 0.138587060211298 0.113020517745608 1.22621151429546 0.220119089399373 1 FALSE Haemophilus parainfluenzae (SP81) -1.79804850385551 0.13891467849279 -12.9435458035404 2.55556565506346e-38 3.85890413914583e-36 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_952 (SP810) 0.371391085295382 0.0731163376848568 5.07945415559704 3.78520850266034e-07 3.70950433260713e-05 TRUE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP826) -0.15589588917978 0.0915492259712459 -1.70286408788146 0.0885935060030774 1 FALSE Actinomyces dentalis (SP828) 0.211093233876831 0.068882943291369 3.06452111060244 0.00218018787105374 0.150432963102708 FALSE Prevotella sp._HMT_942 (SP832) -0.733308167307116 0.106470137167503 -6.88745395484416 5.67997485899827e-12 6.64557058502797e-10 TRUE Leptotrichia wadei (SP838) 0.275148855699597 0.116375213880511 2.36432524181745 0.0180629471133995 0.957336197010172 FALSE Porphyromonas sp._HMT_930 (SP84) -3.39930220220641 0.125583984525086 -27.0679594620393 2.34780991540688e-161 4.24953594688645e-159 TRUE Bergeyella sp._HMT_931 (SP9) -2.21349991396161 0.090310834248008 -24.5097936741785 1.16150595203474e-132 2.06748059462183e-130 TRUE Fusobacterium nucleatum_subsp._vincentii (SP90) -0.0341438462883455 0.0708379092106102 -0.481999633654227 0.629806206515117 1 FALSE Peptidiphaga gingivicola (SP908) 0.377618265371649 0.124570746232881 3.03135589045686 0.00243458104425304 0.165551511009207 FALSE Eikenella corrodens (SP97) 0.61891505741124 0.0986121637906137 6.27625470956505 3.4682584599613e-10 3.88444947515666e-08 TRUE Lachnospiraceae_[G-2] bacterium_HMT_096 (SP973) -0.0584051076642475 0.0625639963478051 -0.933525846711622 0.350548531763363 1 FALSE Prevotella melaninogenica_scopos_sp._HMT_314 (SPP10) -0.543658183588495 0.147228439899158 -3.69261661646939 0.000221958505159854 0.016646887886989 TRUE Prevotella jejuni_sp._HMT_313 (SPP102) -0.740204873614998 0.0858071134229381 -8.62638124145458 6.33236901927467e-18 8.35872710544257e-16 TRUE Prevotella sp._HMT_313_veroralis (SPP103) -0.206729081057751 0.0692335268207693 -2.98596778975205 0.00282682416501333 0.188368771614108 FALSE Enterococcus dongliensis_italicus (SPP108) -0.689634252427109 0.0944731852366195 -7.29978830183227 2.88220850842165e-13 3.54511646535863e-11 TRUE Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP109) 0.0528213630684007 0.136254390097762 0.387667237954693 0.698262303688423 1 FALSE Prevotella scopos_sp._HMT_314 (SPP11) -0.430479138104849 0.0860359840701152 -5.00347782102462 5.63051467802122e-07 5.40529409090037e-05 TRUE Aggregatibacter_Necropsobacter rosorum_sp._HMT_513_sp._HMT_898 (SPP110) -0.0259174488840192 0.110526373224721 -0.234491082334931 0.814603755492632 1 FALSE Moraxella bovoculi_equi_lacunata_sp._HMT_276 (SPP114) 0.151088301426945 0.0970710944692566 1.55647056678439 0.119596236357002 1 FALSE Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP115) 0.295312633715923 0.127062765843031 2.32414768997506 0.0201175797955844 1 FALSE Conchiformibius_Kingella kuhniae_oralis (SPP119) 0.564723626690867 0.0722586273834468 7.81531074060002 5.482760082333e-15 6.90827770373958e-13 TRUE Prevotella jejuni_scopos_sp._HMT_313_sp._HMT_314 (SPP12) -0.496378816495428 0.0927482756715201 -5.35189266756201 8.70390228223376e-08 8.87798032787843e-06 TRUE Lachnoanaerobaculum gingivalis_umeaense (SPP123) -0.052481608210667 0.118840328907119 -0.441614464494496 0.658768215228119 1 FALSE Kingella_Neisseria denitrificans_elongata (SPP125) 1.80498446876247 0.149934241070107 12.0385073875052 2.22953104753964e-33 3.29970595035867e-31 TRUE Capnocytophaga sp._HMT_323_sp._HMT_412_sp._HMT_902 (SPP127) 0.354396624673378 0.0834125611723157 4.24872009314348 2.14995351658339e-05 0.00176296188359838 TRUE Streptococcus lactarius_peroris_sp._HMT_074 (SPP128) -1.53591583617466 0.0697882925262074 -22.0082162863905 2.40260044165468e-107 4.18052476847915e-105 TRUE Prevotella histicola_melaninogenica (SPP13) -0.409041216959175 0.0707553892155938 -5.78106094099509 7.42309926190158e-09 8.09117819547272e-07 TRUE Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP133) 0.366130129251155 0.0836137340260149 4.3788276353887 1.19319454346174e-05 0.00101421536194248 TRUE Capnocytophaga ochracea_sp._HMT_324 (SPP139) 0.23681954907436 0.0737067858529297 3.21299519893455 0.00131358485357658 0.0945781094575136 FALSE Leptotrichia shahii_sp._HMT_879 (SPP149) 0.210738222974369 0.103487723223161 2.03635964161598 0.0417142549204023 1 FALSE Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP156) 0.731157041100166 0.162417038486979 4.50172622226937 6.74037707381525e-06 0.000599893559569558 TRUE Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP158) -0.0346564458717367 0.118562317614584 -0.292305739032497 0.770052871228614 1 FALSE Prevotella sp._HMT_306_vespertina (SPP163) -0.490018581313407 0.0887645204167686 -5.52043292762316 3.3816545688741e-08 3.5507372973178e-06 TRUE Leptotrichia_Pseudoleptotrichia goodfellowii (SPP166) -0.112519837797491 0.0730758842346921 -1.53976703772916 0.123617149346191 1 FALSE Campylobacter rectus_showae (SPP168) 0.498836570214033 0.113237231091164 4.40523461592269 1.05669447140262e-05 0.00090875724540625 TRUE Capnocytophaga endodontalis_sp._HMT_326 (SPP170) 0.254615193632609 0.100926497218439 2.52277846402947 0.0116431725436013 0.698590352616075 FALSE Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP174) -1.48039020514541 0.136214423224801 -10.8680870211684 1.63594977742097e-27 2.37212717726041e-25 TRUE Porphyromonas pasteri_sp._HMT_278 (SPP175) -1.21544318975287 0.155617857137176 -7.81043520398476 5.69908524143121e-15 7.12385655178901e-13 TRUE Neisseria cinerea_flavescens_perflava_subflava (SPP181) -2.31303252171269 0.137441384725646 -16.8292288842247 1.49030343537613e-63 2.47390370272437e-61 TRUE Selenomonas sp._HMT_442_sputigena (SPP184) 0.264969807492384 0.08981425476693 2.95019769612282 0.00317570652721619 0.206420924269052 FALSE Schaalia georgiae_sp._HMT_178_sp._HMT_877 (SPP186) 1.04540537715465 0.102817514148965 10.1675807454364 2.76695617114509e-24 3.87373863960312e-22 TRUE Kingella_Neisseria potus_sp._HMT_018_sp._HMT_020 (SPP19) 0.167087797535771 0.0678898788394259 2.46115916528544 0.0138488912589245 0.803235693017623 FALSE Neisseria sp._HMT_018_sp._HMT_499 (SPP20) 0.316597923520846 0.11004907844062 2.8768793706135 0.00401629096888296 0.254696046919776 FALSE Pseudomonas brenneri_fildesensis_gessardii_proteolytica_veroni ...(5 species) (SPP21) 0.334117411584012 0.0649892385349768 5.14111903933436 2.73106943937369e-07 2.70375874497996e-05 TRUE Centipeda_Selenomonas dianae_noxia_periodontii (SPP22) 0.226062000134538 0.075665933503279 2.98763247432534 0.00281147420319564 0.188368771614108 FALSE Tannerella sp._HMT_286_sp._HMT_808 (SPP23) 0.0135898946331597 0.107481565597377 0.126439306662755 0.899384189588966 1 FALSE Tannerella serpentiformis_sp._HMT_286_sp._HMT_808 (SPP24) 0.00516746086226996 0.0585591965121547 0.0882433702996145 0.929683247228849 1 FALSE Schaalia odontolytica_odontolyticus_sp._HMT_180 (SPP36) -0.0491529876101788 0.119495923873542 -0.411336102662344 0.680826100330535 1 FALSE Alloprevotella sp._HMT_912_sp._HMT_913 (SPP37) 0.000415652234529284 0.0790530641023906 0.00525788897936867 0.995804830890474 1 FALSE Eikenella_Kingella halliae_sp._HMT_012 (SPP38) 0.141422466419235 0.0710809692068795 1.98959676545248 0.0466353727584311 1 FALSE Eikenella_Neisseria canis_halliae (SPP39) 0.204929663666299 0.0884421792426592 2.31710328059683 0.0204981063558089 1 FALSE Veillonella parvula_rogosae_tobetsuensis (SPP4) -0.383165733899432 0.152193664509994 -2.51761947603457 0.0118150890398163 0.698590352616075 FALSE Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP43) 1.54387984323719 0.146010642579414 10.5737487073758 3.94407042683317e-26 5.64002071037143e-24 TRUE Morococcus_Neisseria animalis_cerebrosus_cinerea_flava_flavescens_macac ...(12 species) (SPP44) 1.28962223499478 0.122415930163957 10.5347582889542 5.97365404193374e-26 8.48258873954591e-24 TRUE Arachnia propionica_rubra (SPP47) 0.666703783864125 0.0791195877597899 8.42653257861078 3.56058713567572e-17 4.62876327637843e-15 TRUE Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP48) 0.0126733033939792 0.0736116242156189 0.172164430944457 0.863308260297107 1 FALSE Veillonella atypica_dispar (SPP5) -2.14971587019627 0.148757155900169 -14.4511761951065 2.46441159761128e-47 3.89377032422582e-45 TRUE Fusobacterium nucleatum_nucleatum_subsp._animalis_simiae (SPP50) 0.0411835983529706 0.0909029962187982 0.453049955073474 0.650512770381581 1 FALSE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP51) -0.153596209250602 0.113073011484119 -1.35838081284475 0.174342879347484 1 FALSE Sphingomonas alpina_echinoides_oligophenolica (SPP55) 0.535316871826589 0.0937880069039352 5.70773267817602 1.14491048542792e-08 1.22505421940788e-06 TRUE Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP59) -0.401280147173066 0.100504010144955 -3.99267796970794 6.53312656424597e-05 0.00529183251703923 TRUE Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP6) -2.31709394335137 0.0924873640468381 -25.0530866268167 1.61573950011527e-138 2.90833110020748e-136 TRUE Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP61) -2.23485623621825 0.145230603965839 -15.3883284596402 1.96031186559445e-53 3.19530834091895e-51 TRUE Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP65) -3.4535903256445 0.118979659940659 -29.0267288321968 3.02695463266068e-185 5.50905743144244e-183 TRUE Selenomonas dianae_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146 ...(11 species) (SPP66) 0.142605621810414 0.0691814905736766 2.06132623954586 0.0392719265202 1 FALSE Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP67) 0.57168336711413 0.110632466091328 5.16741050174367 2.37359562172267e-07 2.37359562172267e-05 TRUE Selenomonas flueggei_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_1 ...(10 species) (SPP68) 0.167375507455621 0.0683480309828735 2.4488709484193 0.0143304782659864 0.816837261161225 FALSE Streptococcus salivarius_thermophilus_vestibularis (SPP7) -2.82869622349427 0.126784092857321 -22.3111287839367 2.88132588360989e-110 5.04232029631731e-108 TRUE Selenomonas artemidis_sp._HMT_137 (SPP70) 0.709966262493738 0.102404472047684 6.93296150350879 4.12120384926866e-12 4.9042325806297e-10 TRUE Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP76) -0.296879451096472 0.155130021735384 -1.9137459517854 0.0556526244931243 1 FALSE Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP78) -2.60560093488818 0.107914528340822 -24.1450430720413 8.41777922702536e-129 1.48152914395646e-126 TRUE Canicola_Haemophilus haemoglobinophilus_parainfluenzae_pittmaniae (SPP79) -0.677485457993904 0.0948713830274207 -7.14109393554524 9.25910460184973e-13 1.12035165682382e-10 TRUE Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP8) -3.00820096850415 0.100950468727297 -29.798781584961 4.05122492696645e-195 7.4137416163486e-193 TRUE Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(21 species) (SPP80) -1.34879067686737 0.0848115050817106 -15.9033927716281 6.0024045303926e-57 9.84394342984387e-55 TRUE Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP82) -0.0150314916837703 0.104344910682727 -0.14405582012021 0.885456391186084 1 FALSE Prevotella loescheii_sp._HMT_472 (SPP83) 0.46258595391397 0.11954318035554 3.86961391304939 0.000109007840578945 0.00839360372457878 TRUE Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP85) -1.6226450632574 0.086843739978379 -18.6846520389539 6.6007838302432e-78 1.12213325114134e-75 TRUE Leptotrichia sp._HMT_215_sp._HMT_217 (SPP9) 0.119937367458176 0.0999407303625229 1.20008496058732 0.230106345802871 1 FALSE Conchiformibius_Eikenella corrodens_steedae (SPP91) 0.403163846017424 0.0715521538632732 5.63454521282221 1.75520909513063e-08 1.86052164083847e-06 TRUE Aggregatibacter aphrophilus_paraphrophilus (SPP94) 0.147812226904151 0.133763813732852 1.10502401792577 0.269149182080093 1 FALSE Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP95) 3.33836078856579 0.155660835941517 21.4463758232677 4.93647746847706e-102 8.54010602046531e-100 TRUE Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP96) 1.09917106278359 0.0820111483666766 13.4027029821498 5.83005218249534e-41 9.09488140469273e-39 TRUE Fusobacterium hwasookii_sp._HMT_370 (SPP97) -0.334203117091569 0.139319408951109 -2.39882669333496 0.0164476972004732 0.904623346026028 FALSE