QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Actinomyces multispecies_spp95_6 (SPP95) 442
Corynebacterium durum (SP144) 442
Haemophilus multispecies_spp65_5 (SPP65) 442
Haemophilus multispecies_spp61_3 (SPP61) 437
Porphyromonas sp. HMT930 (SP84) 436
Streptococcus multispecies_spp8_6 (SPP8) 432
Rothia mucilaginosa (SP59) 432
Streptococcus sanguinis (SP261) 431
Fusobacterium periodonticum (SP687) 430
Eikenella halliae (SP19) 430
Bergeyella sp. HMT206 (SP520) 430
Streptococcus multispecies_spp78_7 (SPP78) 430
Prevotella melaninogenica (SP124) 430
Gemella multispecies_spp6_4 (SPP6) 429
Prevotella nanceiensis (SP475) 429
Neisseria multispecies_spp181_4 (SPP181) 428
Streptococcus multispecies_spp7_3 (SPP7) 428
Haemophilus parahaemolyticus (SP274) 427
Granulicatella elegans (SP602) 427
Prevotella histicola (SP2) 427
Actinomyces multispecies_spp96_4 (SPP96) 426
Lautropia mirabilis (SP652) 426
Abiotrophia defectiva (SP280) 426
Aggregatibacter multispecies_spp76_3 (SPP76) 425
Haemophilus parainfluenzae (SP81) 425
Porphyromonas multispecies_spp174_3 (SPP174) 423
multigenus multispecies_spp125_2 (SPP125) 423
Porphyromonas multispecies_spp175_2 (SPP175) 422
Fusobacterium multispecies_spp97_2 (SPP97) 421
Bergeyella sp. HMT931 (SP9) 421
Oribacterium sinus (SP490) 421
Streptococcus multispecies_spp85_18 (SPP85) 420
Cardiobacterium hominis (SP180) 418
Streptococcus multispecies_spp128_3 (SPP128) 416
multigenus multispecies_spp79_3 (SPP79) 416
Veillonella multispecies_spp5_2 (SPP5) 416
Streptococcus multispecies_spp80_21 (SPP80) 413
Schaalia multispecies_spp186_3 (SPP186) 412
Prevotella multispecies_spp10_3 (SPP10) 411
Alloprevotella sp. HMT308 (SP391) 411
Fusobacterium multispecies_spp51_2 (SPP51) 410
Leptotrichia sp. HMT215 (SP11) 409
Alloprevotella sp. HMT473 (SP513) 409
Veillonella sp. HMT780 (SP75) 406
Leptotrichia hofstadii (SP528) 406
Acinetobacter johnsonii (SP567) 404
Fusobacterium multispecies_spp156_4 (SPP156) 396
Schaalia lingnae_[Not_Validly_Published] (SP133) 396
Streptococcus hongkongensis (SP382) 396
Leptotrichia buccalis (SP106) 394
Actinobacillus porcinus (SP661) 394
Fusobacterium multispecies_spp50_3 (SPP50) 393
Prevotella pallens (SP568) 392
Haemophilus pittmaniae (SP338) 392
Fusobacterium nucleatum (SP79) 390
Campylobacter concisus (SP292) 390
Tannerella multispecies_spp23_2 (SPP23) 383
Arachnia multispecies_spp47_2 (SPP47) 383
Corynebacterium argentoratense (SP809) 383
Leptotrichia sp. HMT392 (SP151) 380
Fusobacterium multispecies_spp158_3 (SPP158) 379
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP122) 377
Prevotella nigrescens (SP575) 377
Prevotella multispecies_spp163_2 (SPP163) 366
Alloprevotella sp. HMT914 (SP135) 362
Catonella morbi (SP96) 357
Prevotella sp. HMT317 (SP386) 356
Leptotrichia trevisanii (SP4) 356
Prevotella multispecies_spp102_2 (SPP102) 356
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 356
Actinomyces graevenitzii (SP532) 355
Haemophilus multispecies_spp62_4 (SPP62) 354
Ruminococcaceae_[G-1] bacterium HMT075 (SP826) 354
multigenus multispecies_spp106_4 (SPP106) 351
Prevotella oris (SP120) 349
Leptotrichia sp. HMT417 (SP375) 348
Prevotella multispecies_spp13_2 (SPP13) 345
Arachnia propionica (SP223) 344
Prevotella sp. HMT313 (SP476) 343
multigenus multispecies_spp48_6 (SPP48) 337
Prevotella maculosa (SP631) 335
Oribacterium asaccharolyticum (SP277) 333
Kingella multispecies_spp49_2 (SPP49) 332
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Caries Free plaque Caries Free plaque Caries Free plaque Caries Free plaque Caries Free plaque Caries saliva Caries saliva Caries saliva Caries saliva Caries saliva
Actinomyces multispecies_spp95_6 (SPP95) 1.0 426.75 935.0 1734.25 10382.0 1.0 36.0 75.0 170.0 1233.0
Corynebacterium durum (SP144) 1.0 6.00 247.0 747.50 4436.0 1.0 8.0 20.0 48.0 469.0
Haemophilus multispecies_spp65_5 (SPP65) 1.0 5.00 12.0 30.00 2134.0 2.0 170.0 443.0 918.0 5740.0
Haemophilus multispecies_spp61_3 (SPP61) 1.0 1.00 2.0 8.00 1021.0 1.0 20.5 79.0 278.0 3584.0
Porphyromonas sp. HMT930 (SP84) 1.0 2.00 6.0 15.25 806.0 1.0 38.0 165.0 419.5 3106.0
Streptococcus multispecies_spp8_6 (SPP8) 1.0 1.00 1.0 2.00 392.0 1.0 11.0 27.0 56.5 503.0
Rothia mucilaginosa (SP59) 1.0 2.00 4.0 10.00 592.0 1.0 29.0 84.0 198.0 2465.0
Streptococcus sanguinis (SP261) 1.0 567.75 1257.5 2291.75 9988.0 7.0 170.5 332.0 689.0 3274.0
Fusobacterium periodonticum (SP687) 1.0 1.00 3.5 10.00 384.0 1.0 16.5 52.0 166.0 1177.0
Eikenella halliae (SP19) 1.0 2.00 5.0 11.00 154.0 1.0 1.0 1.0 3.0 35.0
Bergeyella sp. HMT206 (SP520) 1.0 1.00 1.0 2.00 492.0 1.0 1.0 22.0 143.0 8330.0
Streptococcus multispecies_spp78_7 (SPP78) 1.0 3.00 6.0 15.00 9092.0 3.0 27.0 68.0 154.0 761.0
Prevotella melaninogenica (SP124) 1.0 1.00 3.0 10.00 1149.0 2.0 20.0 55.0 174.0 2449.0
Gemella multispecies_spp6_4 (SPP6) 1.0 24.00 68.0 151.25 2224.0 4.0 280.5 579.0 978.5 5360.0
Prevotella nanceiensis (SP475) 1.0 1.00 2.0 5.00 368.0 1.0 6.5 20.0 54.5 1294.0
Neisseria multispecies_spp181_4 (SPP181) 1.0 10.00 29.0 94.00 2223.0 1.0 107.5 301.0 650.0 4270.0
Streptococcus multispecies_spp7_3 (SPP7) 1.0 2.00 6.0 16.00 9335.0 1.0 34.5 79.0 254.0 1820.0
Haemophilus parahaemolyticus (SP274) 1.0 1.00 1.0 1.00 1212.0 1.0 1.0 6.0 71.0 3921.0
Granulicatella elegans (SP602) 1.0 6.00 15.0 38.00 720.0 1.0 68.0 165.0 380.5 2354.0
Prevotella histicola (SP2) 1.0 1.00 1.0 2.00 200.0 1.0 3.0 9.0 28.5 968.0
Actinomyces multispecies_spp96_4 (SPP96) 1.0 1.00 5.0 13.25 160.0 1.0 1.0 2.0 3.0 49.0
Lautropia mirabilis (SP652) 1.0 40.75 161.0 417.25 8308.0 1.0 18.0 44.0 86.5 897.0
Abiotrophia defectiva (SP280) 1.0 40.50 142.0 332.25 3770.0 1.0 19.0 43.0 91.0 442.0
Aggregatibacter multispecies_spp76_3 (SPP76) 1.0 1.00 5.0 46.00 1366.0 1.0 28.5 88.0 223.5 1482.0
Haemophilus parainfluenzae (SP81) 1.0 24.00 112.5 373.00 7524.0 19.0 504.0 870.0 1733.0 6190.0
Porphyromonas multispecies_spp174_3 (SPP174) 1.0 2.00 13.0 60.00 933.0 1.0 29.0 86.0 211.0 2604.0
multigenus multispecies_spp125_2 (SPP125) 1.0 47.25 179.5 532.50 6120.0 1.0 21.0 62.0 145.5 2699.0
Porphyromonas multispecies_spp175_2 (SPP175) 1.0 2.00 25.0 175.50 2109.0 1.0 85.0 181.0 365.5 1717.0
Fusobacterium multispecies_spp97_2 (SPP97) 1.0 1.00 3.0 25.00 1867.0 1.0 9.0 33.0 95.0 1120.0
Bergeyella sp. HMT931 (SP9) 1.0 1.00 1.0 2.00 131.0 1.0 2.0 7.0 18.0 210.0
Oribacterium sinus (SP490) 1.0 1.00 1.0 1.00 33.0 1.0 2.0 5.0 12.0 147.0
Streptococcus multispecies_spp85_18 (SPP85) 1.0 641.00 1329.0 2616.00 16350.0 674.0 2978.5 4710.0 6856.0 15734.0
Cardiobacterium hominis (SP180) 1.0 11.75 71.0 178.50 1994.0 1.0 7.5 22.0 51.5 498.0
Streptococcus multispecies_spp128_3 (SPP128) 1.0 1.00 3.0 6.00 26.0 1.0 7.0 11.0 16.5 73.0
multigenus multispecies_spp79_3 (SPP79) 1.0 1.00 1.0 2.25 89.0 1.0 1.0 7.0 20.0 224.0
Veillonella multispecies_spp5_2 (SPP5) 1.0 3.00 14.0 67.25 5305.0 2.0 27.5 90.0 280.0 2696.0
Streptococcus multispecies_spp80_21 (SPP80) 1.0 2.00 6.0 13.00 188.0 1.0 12.5 21.0 33.5 125.0
Schaalia multispecies_spp186_3 (SPP186) 1.0 1.00 2.0 17.00 334.0 1.0 1.0 2.0 4.0 70.0
Prevotella multispecies_spp10_3 (SPP10) 1.0 1.00 2.0 26.25 2335.0 1.0 5.0 25.0 93.0 1664.0
Alloprevotella sp. HMT308 (SP391) 1.0 1.00 1.0 2.00 49.0 1.0 2.0 4.0 12.0 322.0
Fusobacterium multispecies_spp51_2 (SPP51) 1.0 1.00 1.0 5.00 882.0 1.0 2.0 9.0 31.5 1625.0
Leptotrichia sp. HMT215 (SP11) 1.0 1.00 2.0 7.00 481.0 1.0 4.0 13.0 29.5 297.0
Alloprevotella sp. HMT473 (SP513) 1.0 4.00 15.0 55.25 1554.0 1.0 13.0 86.0 317.5 4079.0
Veillonella sp. HMT780 (SP75) 1.0 4.00 10.0 35.25 1230.0 1.0 13.0 53.0 172.0 1633.0
Leptotrichia hofstadii (SP528) 1.0 1.00 1.0 9.00 1171.0 1.0 2.0 14.0 63.5 1587.0
Acinetobacter johnsonii (SP567) 1.0 1.00 1.0 2.00 523.0 1.0 1.0 1.0 1.0 4.0
Fusobacterium multispecies_spp156_4 (SPP156) 1.0 4.00 62.0 205.75 1072.0 1.0 47.5 112.0 264.0 1243.0
Schaalia lingnae_[Not_Validly_Published] (SP133) 1.0 1.00 1.0 1.00 24.0 1.0 1.0 3.0 6.0 77.0
Streptococcus hongkongensis (SP382) 1.0 1.00 1.0 1.00 22.0 1.0 1.0 2.0 5.0 35.0
Leptotrichia buccalis (SP106) 1.0 1.00 2.0 22.00 2299.0 1.0 3.0 18.0 50.0 1131.0
Actinobacillus porcinus (SP661) 1.0 1.00 1.0 2.00 14.0 1.0 2.0 3.0 5.0 19.0
Fusobacterium multispecies_spp50_3 (SPP50) 1.0 1.00 3.0 8.00 44.0 1.0 3.5 9.0 17.0 63.0
Prevotella pallens (SP568) 1.0 1.00 1.0 1.00 221.0 1.0 1.0 2.0 6.0 515.0
Haemophilus pittmaniae (SP338) 1.0 1.00 1.0 1.00 878.0 1.0 1.0 2.0 8.5 1062.0
Fusobacterium nucleatum (SP79) 1.0 1.00 12.0 66.00 1075.0 1.0 13.0 33.0 76.0 688.0
Campylobacter concisus (SP292) 1.0 1.00 3.0 10.25 356.0 1.0 5.0 10.0 19.5 323.0
Tannerella multispecies_spp23_2 (SPP23) 1.0 1.00 1.0 6.00 282.0 1.0 2.0 6.0 18.0 433.0
Arachnia multispecies_spp47_2 (SPP47) 1.0 1.00 1.0 5.25 387.0 1.0 1.0 1.0 3.0 18.0
Corynebacterium argentoratense (SP809) 1.0 1.00 1.0 4.00 39.0 1.0 1.0 1.0 2.0 19.0
Leptotrichia sp. HMT392 (SP151) 1.0 1.00 2.0 22.25 1334.0 1.0 3.0 17.0 54.0 596.0
Fusobacterium multispecies_spp158_3 (SPP158) 1.0 1.00 1.0 8.00 3825.0 1.0 1.0 5.0 29.0 544.0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP122) 1.0 1.00 1.0 4.00 293.0 1.0 1.0 5.0 15.5 274.0
Prevotella nigrescens (SP575) 1.0 1.00 1.0 1.00 198.0 1.0 1.0 2.0 10.0 1891.0
Prevotella multispecies_spp163_2 (SPP163) 1.0 1.00 1.0 1.00 341.0 1.0 1.0 2.0 5.0 416.0
Alloprevotella sp. HMT914 (SP135) 1.0 1.00 1.0 5.00 451.0 1.0 1.0 5.0 16.5 208.0
Catonella morbi (SP96) 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 3.0 29.0
Prevotella sp. HMT317 (SP386) 1.0 1.00 1.0 32.25 886.0 1.0 3.0 11.0 43.5 770.0
Leptotrichia trevisanii (SP4) 1.0 1.00 1.0 3.00 400.0 1.0 1.0 3.0 10.0 755.0
Prevotella multispecies_spp102_2 (SPP102) 1.0 1.00 1.0 1.00 68.0 1.0 1.0 1.0 4.0 192.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 1.0 1.00 1.0 21.25 3519.0 1.0 1.0 1.0 5.0 305.0
Actinomyces graevenitzii (SP532) 1.0 1.00 1.0 1.00 23.0 1.0 1.0 2.0 3.0 235.0
Haemophilus multispecies_spp62_4 (SPP62) 1.0 1.00 1.0 1.00 25.0 1.0 1.0 2.0 3.0 32.0
Ruminococcaceae_[G-1] bacterium HMT075 (SP826) 1.0 1.00 1.0 3.00 141.0 1.0 1.0 3.0 9.0 287.0
multigenus multispecies_spp106_4 (SPP106) 1.0 1.00 1.0 1.00 524.0 1.0 1.0 1.0 1.0 1.0
Prevotella oris (SP120) 1.0 1.00 1.0 3.00 1362.0 1.0 1.0 3.0 15.5 611.0
Leptotrichia sp. HMT417 (SP375) 1.0 1.00 2.0 8.00 3062.0 1.0 2.0 8.0 41.5 761.0
Prevotella multispecies_spp13_2 (SPP13) 1.0 1.00 1.0 1.00 103.0 1.0 1.0 2.0 3.0 73.0
Arachnia propionica (SP223) 1.0 1.00 1.0 2.00 44.0 1.0 1.0 1.0 1.0 22.0
Prevotella sp. HMT313 (SP476) 1.0 1.00 1.0 1.00 53.0 1.0 1.0 1.0 3.0 74.0
multigenus multispecies_spp48_6 (SPP48) 1.0 1.00 1.0 1.00 508.0 1.0 1.0 1.0 5.0 220.0
Prevotella maculosa (SP631) 1.0 1.00 1.0 1.00 108.0 1.0 1.0 2.0 6.0 116.0
Oribacterium asaccharolyticum (SP277) 1.0 1.00 1.0 1.00 21.0 1.0 1.0 1.0 2.0 25.0
Kingella multispecies_spp49_2 (SPP49) 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 2.0 27.0
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