QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Actinomyces multispecies_spp95_6 (SPP95) 187
Corynebacterium durum (SP144) 187
Streptococcus multispecies_spp8_6 (SPP8) 185
Porphyromonas sp. HMT930 (SP84) 184
Haemophilus multispecies_spp65_5 (SPP65) 184
Rothia mucilaginosa (SP59) 184
Haemophilus parainfluenzae (SP81) 181
Streptococcus multispecies_spp85_18 (SPP85) 181
Streptococcus multispecies_spp7_3 (SPP7) 181
Prevotella melaninogenica (SP124) 181
Prevotella nanceiensis (SP475) 180
Granulicatella elegans (SP602) 179
Streptococcus multispecies_spp78_7 (SPP78) 178
Streptococcus hongkongensis (SP382) 178
Oribacterium sinus (SP490) 178
Veillonella multispecies_spp5_2 (SPP5) 178
Lautropia mirabilis (SP652) 178
Bergeyella sp. HMT931 (SP9) 178
Haemophilus multispecies_spp61_3 (SPP61) 177
Abiotrophia defectiva (SP280) 177
Corynebacterium matruchotii (SP150) 177
Alloprevotella sp. HMT308 (SP391) 177
Gemella multispecies_spp6_4 (SPP6) 177
Schaalia lingnae_[Not_Validly_Published] (SP133) 177
Streptococcus sanguinis (SP261) 176
Alloprevotella sp. HMT473 (SP513) 176
Fusobacterium periodonticum (SP687) 176
Streptococcus multispecies_spp128_3 (SPP128) 175
multigenus multispecies_spp125_2 (SPP125) 175
Capnocytophaga sputigena (SP384) 175
multigenus multispecies_spp43_5 (SPP43) 175
Prevotella multispecies_spp102_2 (SPP102) 175
Veillonella sp. HMT780 (SP75) 175
Neisseria multispecies_spp181_4 (SPP181) 175
Cardiobacterium hominis (SP180) 175
Prevotella histicola (SP2) 175
Actinomyces multispecies_spp96_4 (SPP96) 175
Streptococcus multispecies_spp80_21 (SPP80) 175
Eikenella halliae (SP19) 174
Porphyromonas multispecies_spp174_3 (SPP174) 174
Leptotrichia sp. HMT215 (SP11) 174
Bergeyella sp. HMT206 (SP520) 174
Kingella oralis (SP566) 174
Schaalia multispecies_spp186_3 (SPP186) 174
Alloprevotella sp. HMT914 (SP135) 173
Capnocytophaga gingivalis (SP291) 173
multigenus multispecies_spp44_12 (SPP44) 173
Campylobacter concisus (SP292) 172
Rothia aeria (SP141) 172
Porphyromonas multispecies_spp175_2 (SPP175) 172
Haemophilus parahaemolyticus (SP274) 171
Kingella sp. HMT012 (SP252) 171
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 171
Actinomyces massiliensis (SP397) 170
Leptotrichia sp. HMT221 (SP164) 170
Rothia dentocariosa (SP394) 169
Capnocytophaga granulosa (SP499) 168
Leptotrichia shahii (SP6) 167
Capnocytophaga leadbetteri (SP312) 167
Veillonella dispar (SP121) 166
Leptotrichia hongkongensis (SP224) 166
multigenus multispecies_spp79_3 (SPP79) 164
Haemophilus pittmaniae (SP338) 164
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP122) 164
Enterococcus multispecies_spp108_2 (SPP108) 163
Megasphaera micronuciformis (SP385) 162
Prevotella pallens (SP568) 162
Actinomyces graevenitzii (SP532) 162
Actinobacillus porcinus (SP661) 162
Prevotella sp. HMT942 (SP832) 161
Prevotella salivae (SP1) 161
Prevotella multispecies_spp163_2 (SPP163) 161
Prevotella multispecies_spp13_2 (SPP13) 161
Prevotella sp. HMT313 (SP476) 161
Prevotella multispecies_spp11_2 (SPP11) 160
Arachnia multispecies_spp47_2 (SPP47) 159
Prevotella multispecies_spp12_4 (SPP12) 159
Selenomonas multispecies_spp70_2 (SPP70) 158
Fusobacterium sp. HMT248 (SP10) 156
Lachnoanaerobaculum orale (SP260) 155
Schaalia sp. HMT172 (SP153) 154
Prevotella multispecies_spp103_2 (SPP103) 154
multigenus multispecies_spp119_2 (SPP119) 154
Prevotella multispecies_spp10_3 (SPP10) 153
Eikenella corrodens (SP97) 152
Leptotrichia sp. HMT212 (SP32) 152
Prevotella sp. HMT309 (SP491) 151
Streptococcus multispecies_spp59_3 (SPP59) 151
Selenomonas multispecies_spp67_9 (SPP67) 150
Streptococcus intermedius (SP197) 149
Simonsiella muelleri (SP179) 147
Fusobacterium multispecies_spp156_4 (SPP156) 143
Granulicatella adiacens (SP401) 141
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Caries Free plaque Caries Free plaque Caries Free plaque Caries Free plaque Caries Free plaque Caries Free saliva Caries Free saliva Caries Free saliva Caries Free saliva Caries Free saliva
Actinomyces multispecies_spp95_6 (SPP95) 1.0 426.75 935.0 1734.25 10382.0 1.0 3.00 26.0 95.50 3032.0
Corynebacterium durum (SP144) 1.0 6.00 247.0 747.50 4436.0 1.0 1.00 6.0 31.00 1364.0
Streptococcus multispecies_spp8_6 (SPP8) 1.0 1.00 1.0 2.00 392.0 1.0 10.00 37.0 102.75 1172.0
Porphyromonas sp. HMT930 (SP84) 1.0 2.00 6.0 15.25 806.0 1.0 58.25 234.5 629.25 5559.0
Haemophilus multispecies_spp65_5 (SPP65) 1.0 5.00 12.0 30.00 2134.0 1.0 146.25 421.0 1046.00 4245.0
Rothia mucilaginosa (SP59) 1.0 2.00 4.0 10.00 592.0 1.0 46.00 134.0 323.50 3321.0
Haemophilus parainfluenzae (SP81) 1.0 24.00 112.5 373.00 7524.0 1.0 294.25 736.5 1581.75 8718.0
Streptococcus multispecies_spp85_18 (SPP85) 1.0 641.00 1329.0 2616.00 16350.0 8.0 3831.50 5633.5 8265.50 19280.0
Streptococcus multispecies_spp7_3 (SPP7) 1.0 2.00 6.0 16.00 9335.0 1.0 30.25 119.0 383.00 4830.0
Prevotella melaninogenica (SP124) 1.0 1.00 3.0 10.00 1149.0 1.0 25.00 101.0 319.25 6014.0
Prevotella nanceiensis (SP475) 1.0 1.00 2.0 5.00 368.0 1.0 7.00 23.0 70.00 1330.0
Granulicatella elegans (SP602) 1.0 6.00 15.0 38.00 720.0 1.0 127.00 266.5 494.50 4520.0
Streptococcus multispecies_spp78_7 (SPP78) 1.0 3.00 6.0 15.00 9092.0 1.0 33.00 89.5 213.00 4177.0
Streptococcus hongkongensis (SP382) 1.0 1.00 1.0 1.00 22.0 1.0 2.00 3.0 9.00 98.0
Oribacterium sinus (SP490) 1.0 1.00 1.0 1.00 33.0 1.0 2.00 5.0 13.00 147.0
Veillonella multispecies_spp5_2 (SPP5) 1.0 3.00 14.0 67.25 5305.0 1.0 31.00 177.5 542.75 3935.0
Lautropia mirabilis (SP652) 1.0 40.75 161.0 417.25 8308.0 1.0 2.00 16.0 66.75 1860.0
Bergeyella sp. HMT931 (SP9) 1.0 1.00 1.0 2.00 131.0 1.0 5.00 14.0 34.00 254.0
Haemophilus multispecies_spp61_3 (SPP61) 1.0 1.00 2.0 8.00 1021.0 1.0 2.00 41.5 196.50 3031.0
Abiotrophia defectiva (SP280) 1.0 40.50 142.0 332.25 3770.0 1.0 3.00 16.5 58.00 659.0
Corynebacterium matruchotii (SP150) 1.0 1.00 185.5 701.25 4008.0 1.0 1.00 3.5 54.00 908.0
Alloprevotella sp. HMT308 (SP391) 1.0 1.00 1.0 2.00 49.0 1.0 1.00 5.0 18.00 532.0
Gemella multispecies_spp6_4 (SPP6) 1.0 24.00 68.0 151.25 2224.0 3.0 364.25 597.0 923.00 3383.0
Schaalia lingnae_[Not_Validly_Published] (SP133) 1.0 1.00 1.0 1.00 24.0 1.0 1.00 4.0 10.00 684.0
Streptococcus sanguinis (SP261) 1.0 567.75 1257.5 2291.75 9988.0 3.0 50.25 158.0 429.75 5473.0
Alloprevotella sp. HMT473 (SP513) 1.0 4.00 15.0 55.25 1554.0 1.0 33.25 340.0 1412.00 11483.0
Fusobacterium periodonticum (SP687) 1.0 1.00 3.5 10.00 384.0 1.0 12.00 60.0 204.75 3948.0
Streptococcus multispecies_spp128_3 (SPP128) 1.0 1.00 3.0 6.00 26.0 1.0 8.00 13.0 20.00 91.0
multigenus multispecies_spp125_2 (SPP125) 1.0 47.25 179.5 532.50 6120.0 1.0 4.00 26.5 96.75 1639.0
Capnocytophaga sputigena (SP384) 1.0 40.75 195.5 463.50 5451.0 1.0 4.00 28.5 109.75 1773.0
multigenus multispecies_spp43_5 (SPP43) 1.0 484.75 1418.0 3250.25 25181.0 1.0 62.25 266.5 798.75 5733.0
Prevotella multispecies_spp102_2 (SPP102) 1.0 1.00 1.0 1.00 68.0 1.0 1.00 2.0 5.75 545.0
Veillonella sp. HMT780 (SP75) 1.0 4.00 10.0 35.25 1230.0 1.0 41.50 164.5 579.75 4365.0
Neisseria multispecies_spp181_4 (SPP181) 1.0 10.00 29.0 94.00 2223.0 1.0 126.00 432.5 1278.75 7905.0
Cardiobacterium hominis (SP180) 1.0 11.75 71.0 178.50 1994.0 1.0 1.00 6.0 29.00 377.0
Prevotella histicola (SP2) 1.0 1.00 1.0 2.00 200.0 1.0 1.00 5.0 31.00 1980.0
Actinomyces multispecies_spp96_4 (SPP96) 1.0 1.00 5.0 13.25 160.0 1.0 1.00 1.0 2.00 20.0
Streptococcus multispecies_spp80_21 (SPP80) 1.0 2.00 6.0 13.00 188.0 1.0 13.00 22.0 33.00 102.0
Eikenella halliae (SP19) 1.0 2.00 5.0 11.00 154.0 1.0 1.00 1.0 2.00 25.0
Porphyromonas multispecies_spp174_3 (SPP174) 1.0 2.00 13.0 60.00 933.0 1.0 18.00 64.5 178.50 1736.0
Leptotrichia sp. HMT215 (SP11) 1.0 1.00 2.0 7.00 481.0 1.0 4.00 13.0 45.75 920.0
Bergeyella sp. HMT206 (SP520) 1.0 1.00 1.0 2.00 492.0 1.0 1.00 14.5 177.00 6674.0
Kingella oralis (SP566) 1.0 3.00 57.0 208.50 7723.0 1.0 1.00 4.0 27.00 1340.0
Schaalia multispecies_spp186_3 (SPP186) 1.0 1.00 2.0 17.00 334.0 1.0 1.00 1.0 2.00 54.0
Alloprevotella sp. HMT914 (SP135) 1.0 1.00 1.0 5.00 451.0 1.0 1.00 8.0 38.00 1602.0
Capnocytophaga gingivalis (SP291) 1.0 2.00 20.0 61.50 2363.0 1.0 1.00 4.0 18.00 457.0
multigenus multispecies_spp44_12 (SPP44) 1.0 15.00 46.0 98.00 590.0 1.0 2.00 9.5 29.00 287.0
Campylobacter concisus (SP292) 1.0 1.00 3.0 10.25 356.0 1.0 3.00 8.0 19.75 349.0
Rothia aeria (SP141) 1.0 14.00 169.0 515.75 4990.0 1.0 1.00 21.0 86.00 2277.0
Porphyromonas multispecies_spp175_2 (SPP175) 1.0 2.00 25.0 175.50 2109.0 1.0 29.25 117.0 290.00 2487.0
Haemophilus parahaemolyticus (SP274) 1.0 1.00 1.0 1.00 1212.0 1.0 1.00 1.0 9.00 2868.0
Kingella sp. HMT012 (SP252) 1.0 6.75 32.5 104.00 3033.0 1.0 1.00 5.0 35.75 874.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 1.0 1.00 1.0 21.25 3519.0 1.0 1.00 1.0 2.00 305.0
Actinomyces massiliensis (SP397) 1.0 1.00 9.5 114.00 1578.0 1.0 1.00 1.0 7.00 277.0
Leptotrichia sp. HMT221 (SP164) 1.0 1.00 1.0 4.00 525.0 1.0 1.00 2.0 23.00 3260.0
Rothia dentocariosa (SP394) 1.0 3.00 74.5 444.00 7944.0 1.0 1.00 8.0 53.75 1758.0
Capnocytophaga granulosa (SP499) 1.0 1.00 15.0 86.00 3510.0 1.0 1.00 3.0 18.00 1106.0
Leptotrichia shahii (SP6) 1.0 2.00 14.0 314.50 4735.0 1.0 1.00 3.0 49.00 3764.0
Capnocytophaga leadbetteri (SP312) 1.0 4.00 53.5 193.00 3271.0 1.0 2.00 13.0 63.75 3539.0
Veillonella dispar (SP121) 1.0 8.00 110.0 498.25 5709.0 1.0 3.00 14.0 97.75 5050.0
Leptotrichia hongkongensis (SP224) 1.0 4.00 92.0 342.00 5165.0 1.0 1.00 15.0 111.00 2967.0
multigenus multispecies_spp79_3 (SPP79) 1.0 1.00 1.0 2.25 89.0 1.0 1.00 2.0 10.00 345.0
Haemophilus pittmaniae (SP338) 1.0 1.00 1.0 1.00 878.0 1.0 1.00 1.0 5.00 1634.0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP122) 1.0 1.00 1.0 4.00 293.0 1.0 1.00 4.0 15.00 451.0
Enterococcus multispecies_spp108_2 (SPP108) 1.0 2.00 7.0 14.00 146.0 1.0 6.00 12.0 23.00 251.0
Megasphaera micronuciformis (SP385) 1.0 1.00 1.0 1.00 199.0 1.0 1.00 1.0 3.00 329.0
Prevotella pallens (SP568) 1.0 1.00 1.0 1.00 221.0 1.0 1.00 1.0 3.75 662.0
Actinomyces graevenitzii (SP532) 1.0 1.00 1.0 1.00 23.0 1.0 1.00 1.0 4.00 453.0
Actinobacillus porcinus (SP661) 1.0 1.00 1.0 2.00 14.0 1.0 1.00 3.0 5.00 22.0
Prevotella sp. HMT942 (SP832) 1.0 1.00 1.0 4.00 163.0 1.0 1.00 3.0 13.00 756.0
Prevotella salivae (SP1) 1.0 1.00 1.0 2.00 653.0 1.0 1.00 2.0 10.00 824.0
Prevotella multispecies_spp163_2 (SPP163) 1.0 1.00 1.0 1.00 341.0 1.0 1.00 1.0 4.00 2123.0
Prevotella multispecies_spp13_2 (SPP13) 1.0 1.00 1.0 1.00 103.0 1.0 1.00 1.0 4.00 114.0
Prevotella sp. HMT313 (SP476) 1.0 1.00 1.0 1.00 53.0 1.0 1.00 1.0 3.00 279.0
Prevotella multispecies_spp11_2 (SPP11) 1.0 1.00 1.0 1.00 2010.0 1.0 1.00 1.0 4.00 453.0
Arachnia multispecies_spp47_2 (SPP47) 1.0 1.00 1.0 5.25 387.0 1.0 1.00 1.0 2.00 32.0
Prevotella multispecies_spp12_4 (SPP12) 1.0 1.00 1.0 1.00 235.0 1.0 1.00 2.0 5.00 750.0
Selenomonas multispecies_spp70_2 (SPP70) 1.0 1.00 1.0 13.00 587.0 1.0 1.00 1.0 2.00 168.0
Fusobacterium sp. HMT248 (SP10) 1.0 1.00 1.0 1.00 80.0 1.0 1.00 1.0 2.75 722.0
Lachnoanaerobaculum orale (SP260) 1.0 1.00 1.0 2.00 143.0 1.0 1.00 2.0 5.00 261.0
Schaalia sp. HMT172 (SP153) 1.0 1.00 1.0 3.00 28.0 1.0 1.00 2.0 4.00 42.0
Prevotella multispecies_spp103_2 (SPP103) 1.0 1.00 1.0 1.00 186.0 1.0 1.00 1.0 2.00 370.0
multigenus multispecies_spp119_2 (SPP119) 1.0 1.00 2.0 7.00 68.0 1.0 1.00 1.0 2.00 51.0
Prevotella multispecies_spp10_3 (SPP10) 1.0 1.00 2.0 26.25 2335.0 1.0 2.00 9.0 44.00 2777.0
Eikenella corrodens (SP97) 1.0 1.00 3.0 15.00 312.0 1.0 1.00 1.0 5.00 79.0
Leptotrichia sp. HMT212 (SP32) 1.0 3.00 39.0 185.25 4408.0 1.0 2.00 11.0 69.75 1103.0
Prevotella sp. HMT309 (SP491) 1.0 1.00 1.0 1.00 126.0 1.0 1.00 1.0 2.00 325.0
Streptococcus multispecies_spp59_3 (SPP59) 1.0 77.50 205.0 407.25 2740.0 1.0 126.25 233.0 384.25 1640.0
Selenomonas multispecies_spp67_9 (SPP67) 1.0 1.00 1.0 13.00 537.0 1.0 1.00 1.0 3.00 342.0
Streptococcus intermedius (SP197) 1.0 1.00 4.0 37.25 2822.0 1.0 1.00 2.0 11.75 436.0
Simonsiella muelleri (SP179) 1.0 1.00 1.0 1.00 71.0 1.0 1.00 1.0 1.00 983.0
Fusobacterium multispecies_spp156_4 (SPP156) 1.0 4.00 62.0 205.75 1072.0 1.0 2.00 14.0 124.50 2651.0
Granulicatella adiacens (SP401) 1.0 22.00 63.0 133.25 1126.0 1.0 32.00 66.0 134.75 1628.0
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