QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Actinomyces multispecies_spp95_6 (SPP95) 186
Actinomyces massiliensis (SP397) 186
Corynebacterium matruchotii (SP150) 186
Corynebacterium durum (SP144) 186
Kingella oralis (SP566) 185
Rothia dentocariosa (SP394) 185
Porphyromonas sp. HMT930 (SP84) 184
Veillonella dispar (SP121) 183
Lautropia mirabilis (SP652) 183
Rothia mucilaginosa (SP59) 182
Gemella multispecies_spp6_4 (SPP6) 181
Prevotella nanceiensis (SP475) 180
Streptococcus multispecies_spp78_7 (SPP78) 180
Haemophilus multispecies_spp65_5 (SPP65) 180
Granulicatella elegans (SP602) 179
Streptococcus multispecies_spp8_6 (SPP8) 179
Bergeyella sp. HMT931 (SP9) 179
Prevotella melaninogenica (SP124) 178
Streptococcus multispecies_spp7_3 (SPP7) 178
Alloprevotella sp. HMT473 (SP513) 177
Schaalia multispecies_spp186_3 (SPP186) 177
Veillonella sp. HMT780 (SP75) 177
Leptotrichia shahii (SP6) 176
Rothia aeria (SP141) 176
Veillonella multispecies_spp5_2 (SPP5) 176
Fusobacterium periodonticum (SP687) 176
Streptococcus sanguinis (SP261) 175
Abiotrophia defectiva (SP280) 175
Neisseria multispecies_spp181_4 (SPP181) 175
Haemophilus multispecies_spp61_3 (SPP61) 174
Streptococcus multispecies_spp85_18 (SPP85) 174
Prevotella multispecies_spp12_4 (SPP12) 173
Bergeyella sp. HMT206 (SP520) 173
Cardiobacterium hominis (SP180) 173
Streptococcus multispecies_spp128_3 (SPP128) 173
Prevotella multispecies_spp102_2 (SPP102) 173
Oribacterium sinus (SP490) 173
multigenus multispecies_spp125_2 (SPP125) 173
Alloprevotella sp. HMT914 (SP135) 172
Schaalia lingnae_[Not_Validly_Published] (SP133) 172
multigenus multispecies_spp43_5 (SPP43) 172
Streptococcus multispecies_spp80_21 (SPP80) 171
Streptococcus hongkongensis (SP382) 171
Prevotella histicola (SP2) 171
Alloprevotella sp. HMT308 (SP391) 171
Haemophilus parainfluenzae (SP81) 170
Actinomyces multispecies_spp96_4 (SPP96) 170
Leptotrichia sp. HMT215 (SP11) 169
Prevotella sp. HMT942 (SP832) 167
multigenus multispecies_spp79_3 (SPP79) 167
Lachnoanaerobaculum saburreum (SP654) 163
Haemophilus pittmaniae (SP338) 163
Actinomyces graevenitzii (SP532) 163
Streptococcus intermedius (SP197) 163
Haemophilus parahaemolyticus (SP274) 161
multigenus multispecies_spp44_12 (SPP44) 160
Prevotella multispecies_spp11_2 (SPP11) 160
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP122) 160
Porphyromonas multispecies_spp174_3 (SPP174) 159
Actinomyces gerencseriae (SP273) 158
Selenomonas multispecies_spp70_2 (SPP70) 158
Leptotrichia sp. HMT221 (SP164) 157
Selenomonas noxia (SP512) 156
Prevotella multispecies_spp13_2 (SPP13) 156
Eikenella halliae (SP19) 155
Prevotella pallens (SP568) 155
Megasphaera micronuciformis (SP385) 155
Actinobacillus porcinus (SP661) 154
Prevotella sp. HMT313 (SP476) 154
Prevotella salivae (SP1) 153
multigenus multispecies_spp119_2 (SPP119) 152
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 152
Leptotrichia hongkongensis (SP224) 152
Capnocytophaga granulosa (SP499) 151
Fusobacterium sp. HMT248 (SP10) 151
Prevotella multispecies_spp163_2 (SPP163) 150
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP350) 150
Fusobacterium multispecies_spp156_4 (SPP156) 149
Capnocytophaga leadbetteri (SP312) 149
Selenomonas multispecies_spp67_9 (SPP67) 147
Campylobacter gracilis (SP495) 146
Eikenella corrodens (SP97) 146
Capnocytophaga sputigena (SP384) 146
Veillonella denticariosi (SP395) 143
Prevotella sp. HMT309 (SP491) 140
Kingella sp. HMT012 (SP252) 140
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Caries Free saliva Caries Free saliva Caries Free saliva Caries Free saliva Caries Free saliva Caries plaque Caries plaque Caries plaque Caries plaque Caries plaque
Actinomyces multispecies_spp95_6 (SPP95) 1.0 3.00 26.0 95.50 3032.0 1.0 585.0 988.0 2054.0 12509.0
Actinomyces massiliensis (SP397) 1.0 1.00 1.0 7.00 277.0 1.0 15.0 77.0 204.0 1304.0
Corynebacterium matruchotii (SP150) 1.0 1.00 3.5 54.00 908.0 1.0 84.0 397.0 866.0 4488.0
Corynebacterium durum (SP144) 1.0 1.00 6.0 31.00 1364.0 1.0 149.0 402.0 1111.0 8333.0
Kingella oralis (SP566) 1.0 1.00 4.0 27.00 1340.0 1.0 26.0 103.0 238.0 3916.0
Rothia dentocariosa (SP394) 1.0 1.00 8.0 53.75 1758.0 1.0 37.0 237.0 898.0 9557.0
Porphyromonas sp. HMT930 (SP84) 1.0 58.25 234.5 629.25 5559.0 1.0 1.0 4.0 14.0 353.0
Veillonella dispar (SP121) 1.0 3.00 14.0 97.75 5050.0 1.0 42.0 228.0 676.0 3282.0
Lautropia mirabilis (SP652) 1.0 2.00 16.0 66.75 1860.0 1.0 57.0 171.0 435.0 6769.0
Rothia mucilaginosa (SP59) 1.0 46.00 134.0 323.50 3321.0 1.0 2.0 4.0 7.0 802.0
Gemella multispecies_spp6_4 (SPP6) 3.0 364.25 597.0 923.00 3383.0 1.0 38.0 95.0 194.0 1664.0
Prevotella nanceiensis (SP475) 1.0 7.00 23.0 70.00 1330.0 1.0 1.0 2.0 4.0 69.0
Streptococcus multispecies_spp78_7 (SPP78) 1.0 33.00 89.5 213.00 4177.0 1.0 3.0 5.0 11.0 1258.0
Haemophilus multispecies_spp65_5 (SPP65) 1.0 146.25 421.0 1046.00 4245.0 1.0 5.0 13.0 36.0 1116.0
Granulicatella elegans (SP602) 1.0 127.00 266.5 494.50 4520.0 1.0 4.0 16.0 38.0 1444.0
Streptococcus multispecies_spp8_6 (SPP8) 1.0 10.00 37.0 102.75 1172.0 1.0 1.0 1.0 2.0 47.0
Bergeyella sp. HMT931 (SP9) 1.0 5.00 14.0 34.00 254.0 1.0 1.0 1.0 1.0 24.0
Prevotella melaninogenica (SP124) 1.0 25.00 101.0 319.25 6014.0 1.0 2.0 3.0 9.0 853.0
Streptococcus multispecies_spp7_3 (SPP7) 1.0 30.25 119.0 383.00 4830.0 1.0 2.0 6.0 15.0 1314.0
Alloprevotella sp. HMT473 (SP513) 1.0 33.25 340.0 1412.00 11483.0 1.0 3.0 12.0 43.0 1139.0
Schaalia multispecies_spp186_3 (SPP186) 1.0 1.00 1.0 2.00 54.0 1.0 2.0 6.0 32.0 415.0
Veillonella sp. HMT780 (SP75) 1.0 41.50 164.5 579.75 4365.0 1.0 2.0 6.0 19.0 343.0
Leptotrichia shahii (SP6) 1.0 1.00 3.0 49.00 3764.0 1.0 6.0 38.0 570.0 3174.0
Rothia aeria (SP141) 1.0 1.00 21.0 86.00 2277.0 1.0 39.0 96.0 329.0 4806.0
Veillonella multispecies_spp5_2 (SPP5) 1.0 31.00 177.5 542.75 3935.0 1.0 4.0 19.0 79.0 1074.0
Fusobacterium periodonticum (SP687) 1.0 12.00 60.0 204.75 3948.0 1.0 1.0 4.0 12.0 235.0
Streptococcus sanguinis (SP261) 3.0 50.25 158.0 429.75 5473.0 1.0 498.0 929.0 2003.0 8113.0
Abiotrophia defectiva (SP280) 1.0 3.00 16.5 58.00 659.0 1.0 42.0 94.0 221.0 802.0
Neisseria multispecies_spp181_4 (SPP181) 1.0 126.00 432.5 1278.75 7905.0 1.0 12.0 45.0 229.0 4053.0
Haemophilus multispecies_spp61_3 (SPP61) 1.0 2.00 41.5 196.50 3031.0 1.0 1.0 2.0 11.0 491.0
Streptococcus multispecies_spp85_18 (SPP85) 8.0 3831.50 5633.5 8265.50 19280.0 1.0 795.0 1444.0 2755.0 11595.0
Prevotella multispecies_spp12_4 (SPP12) 1.0 1.00 2.0 5.00 750.0 1.0 1.0 1.0 1.0 397.0
Bergeyella sp. HMT206 (SP520) 1.0 1.00 14.5 177.00 6674.0 1.0 1.0 1.0 2.0 16.0
Cardiobacterium hominis (SP180) 1.0 1.00 6.0 29.00 377.0 1.0 10.0 43.0 119.0 3185.0
Streptococcus multispecies_spp128_3 (SPP128) 1.0 8.00 13.0 20.00 91.0 1.0 2.0 3.0 6.0 83.0
Prevotella multispecies_spp102_2 (SPP102) 1.0 1.00 2.0 5.75 545.0 1.0 1.0 1.0 1.0 22.0
Oribacterium sinus (SP490) 1.0 2.00 5.0 13.00 147.0 1.0 1.0 1.0 1.0 21.0
multigenus multispecies_spp125_2 (SPP125) 1.0 4.00 26.5 96.75 1639.0 1.0 27.0 143.0 437.0 5378.0
Alloprevotella sp. HMT914 (SP135) 1.0 1.00 8.0 38.00 1602.0 1.0 1.0 1.0 2.0 90.0
Schaalia lingnae_[Not_Validly_Published] (SP133) 1.0 1.00 4.0 10.00 684.0 1.0 1.0 1.0 1.0 5.0
multigenus multispecies_spp43_5 (SPP43) 1.0 62.25 266.5 798.75 5733.0 2.0 418.0 1310.0 2778.0 11713.0
Streptococcus multispecies_spp80_21 (SPP80) 1.0 13.00 22.0 33.00 102.0 1.0 3.0 7.0 12.0 61.0
Streptococcus hongkongensis (SP382) 1.0 2.00 3.0 9.00 98.0 1.0 1.0 1.0 1.0 15.0
Prevotella histicola (SP2) 1.0 1.00 5.0 31.00 1980.0 1.0 1.0 1.0 3.0 174.0
Alloprevotella sp. HMT308 (SP391) 1.0 1.00 5.0 18.00 532.0 1.0 1.0 1.0 2.0 25.0
Haemophilus parainfluenzae (SP81) 1.0 294.25 736.5 1581.75 8718.0 1.0 44.0 204.0 612.0 4484.0
Actinomyces multispecies_spp96_4 (SPP96) 1.0 1.00 1.0 2.00 20.0 1.0 3.0 8.0 15.0 98.0
Leptotrichia sp. HMT215 (SP11) 1.0 4.00 13.0 45.75 920.0 1.0 1.0 3.0 8.0 506.0
Prevotella sp. HMT942 (SP832) 1.0 1.00 3.0 13.00 756.0 1.0 1.0 1.0 2.0 181.0
multigenus multispecies_spp79_3 (SPP79) 1.0 1.00 2.0 10.00 345.0 1.0 1.0 1.0 2.0 36.0
Lachnoanaerobaculum saburreum (SP654) 1.0 1.00 1.0 2.00 221.0 1.0 1.0 4.0 40.0 401.0
Haemophilus pittmaniae (SP338) 1.0 1.00 1.0 5.00 1634.0 1.0 1.0 1.0 1.0 41.0
Actinomyces graevenitzii (SP532) 1.0 1.00 1.0 4.00 453.0 1.0 1.0 1.0 1.0 11.0
Streptococcus intermedius (SP197) 1.0 1.00 2.0 11.75 436.0 1.0 4.0 15.0 55.0 464.0
Haemophilus parahaemolyticus (SP274) 1.0 1.00 1.0 9.00 2868.0 1.0 1.0 1.0 1.0 184.0
multigenus multispecies_spp44_12 (SPP44) 1.0 2.00 9.5 29.00 287.0 1.0 14.0 45.0 100.0 339.0
Prevotella multispecies_spp11_2 (SPP11) 1.0 1.00 1.0 4.00 453.0 1.0 1.0 1.0 1.0 65.0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP122) 1.0 1.00 4.0 15.00 451.0 1.0 1.0 1.0 4.0 115.0
Porphyromonas multispecies_spp174_3 (SPP174) 1.0 18.00 64.5 178.50 1736.0 1.0 4.0 29.0 123.0 1065.0
Actinomyces gerencseriae (SP273) 1.0 1.00 1.0 1.00 82.0 1.0 1.0 1.0 12.0 1421.0
Selenomonas multispecies_spp70_2 (SPP70) 1.0 1.00 1.0 2.00 168.0 1.0 1.0 4.0 22.0 239.0
Leptotrichia sp. HMT221 (SP164) 1.0 1.00 2.0 23.00 3260.0 1.0 1.0 1.0 4.0 398.0
Selenomonas noxia (SP512) 1.0 1.00 1.0 2.00 294.0 1.0 1.0 2.0 19.0 388.0
Prevotella multispecies_spp13_2 (SPP13) 1.0 1.00 1.0 4.00 114.0 1.0 1.0 1.0 1.0 56.0
Eikenella halliae (SP19) 1.0 1.00 1.0 2.00 25.0 1.0 2.0 4.0 10.0 81.0
Prevotella pallens (SP568) 1.0 1.00 1.0 3.75 662.0 1.0 1.0 1.0 1.0 217.0
Megasphaera micronuciformis (SP385) 1.0 1.00 1.0 3.00 329.0 1.0 1.0 1.0 1.0 28.0
Actinobacillus porcinus (SP661) 1.0 1.00 3.0 5.00 22.0 1.0 1.0 1.0 3.0 15.0
Prevotella sp. HMT313 (SP476) 1.0 1.00 1.0 3.00 279.0 1.0 1.0 1.0 1.0 71.0
Prevotella salivae (SP1) 1.0 1.00 2.0 10.00 824.0 1.0 1.0 1.0 3.0 228.0
multigenus multispecies_spp119_2 (SPP119) 1.0 1.00 1.0 2.00 51.0 1.0 1.0 4.0 8.0 34.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 1.0 1.00 1.0 2.00 305.0 1.0 1.0 3.0 18.0 756.0
Leptotrichia hongkongensis (SP224) 1.0 1.00 15.0 111.00 2967.0 1.0 8.0 114.0 356.0 2598.0
Capnocytophaga granulosa (SP499) 1.0 1.00 3.0 18.00 1106.0 1.0 2.0 13.0 87.0 1191.0
Fusobacterium sp. HMT248 (SP10) 1.0 1.00 1.0 2.75 722.0 1.0 1.0 1.0 1.0 28.0
Prevotella multispecies_spp163_2 (SPP163) 1.0 1.00 1.0 4.00 2123.0 1.0 1.0 1.0 2.0 136.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP350) 1.0 1.00 1.0 2.00 97.0 1.0 1.0 2.0 14.0 311.0
Fusobacterium multispecies_spp156_4 (SPP156) 1.0 2.00 14.0 124.50 2651.0 1.0 11.0 66.0 231.0 1746.0
Capnocytophaga leadbetteri (SP312) 1.0 2.00 13.0 63.75 3539.0 1.0 5.0 58.0 201.0 1104.0
Selenomonas multispecies_spp67_9 (SPP67) 1.0 1.00 1.0 3.00 342.0 1.0 1.0 3.0 19.0 326.0
Campylobacter gracilis (SP495) 1.0 1.00 1.0 5.00 546.0 1.0 1.0 5.0 21.0 384.0
Eikenella corrodens (SP97) 1.0 1.00 1.0 5.00 79.0 1.0 1.0 5.0 14.0 116.0
Capnocytophaga sputigena (SP384) 1.0 4.00 28.5 109.75 1773.0 1.0 18.0 105.0 300.0 2375.0
Veillonella denticariosi (SP395) 1.0 1.00 1.0 4.00 1614.0 1.0 1.0 4.0 32.0 672.0
Prevotella sp. HMT309 (SP491) 1.0 1.00 1.0 2.00 325.0 1.0 1.0 1.0 1.0 43.0
Kingella sp. HMT012 (SP252) 1.0 1.00 5.0 35.75 874.0 1.0 6.0 23.0 72.0 646.0
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