QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Haemophilus multispecies_spp65_5 (SPP65) 187
Corynebacterium durum (SP144) 187
Actinomyces multispecies_spp95_6 (SPP95) 187
Haemophilus multispecies_spp61_3 (SPP61) 182
Porphyromonas sp. HMT930 (SP84) 181
Rothia mucilaginosa (SP59) 177
Streptococcus multispecies_spp8_6 (SPP8) 177
Streptococcus sanguinis (SP261) 176
Fusobacterium periodonticum (SP687) 175
Bergeyella sp. HMT206 (SP520) 175
Streptococcus multispecies_spp78_7 (SPP78) 175
Eikenella halliae (SP19) 175
Prevotella melaninogenica (SP124) 175
Prevotella nanceiensis (SP475) 174
Gemella multispecies_spp6_4 (SPP6) 174
Streptococcus multispecies_spp7_3 (SPP7) 173
Neisseria multispecies_spp181_4 (SPP181) 173
Prevotella histicola (SP2) 172
Haemophilus parahaemolyticus (SP274) 172
Granulicatella elegans (SP602) 172
Abiotrophia defectiva (SP280) 171
Lautropia mirabilis (SP652) 171
Actinomyces multispecies_spp96_4 (SPP96) 171
Aggregatibacter multispecies_spp76_3 (SPP76) 170
Haemophilus parainfluenzae (SP81) 170
multigenus multispecies_spp125_2 (SPP125) 168
Porphyromonas multispecies_spp174_3 (SPP174) 168
Porphyromonas multispecies_spp175_2 (SPP175) 167
Bergeyella sp. HMT931 (SP9) 166
Oribacterium sinus (SP490) 166
Fusobacterium multispecies_spp97_2 (SPP97) 166
Cardiobacterium hominis (SP180) 166
Streptococcus multispecies_spp85_18 (SPP85) 165
multigenus multispecies_spp79_3 (SPP79) 161
Streptococcus multispecies_spp128_3 (SPP128) 161
Veillonella multispecies_spp5_2 (SPP5) 161
Schaalia multispecies_spp186_3 (SPP186) 160
Streptococcus multispecies_spp80_21 (SPP80) 158
Prevotella multispecies_spp10_3 (SPP10) 156
Alloprevotella sp. HMT308 (SP391) 156
Fusobacterium multispecies_spp51_2 (SPP51) 155
Alloprevotella sp. HMT473 (SP513) 154
Leptotrichia sp. HMT215 (SP11) 154
Acinetobacter johnsonii (SP567) 152
Veillonella sp. HMT780 (SP75) 151
Leptotrichia hofstadii (SP528) 151
Arachnia multispecies_spp47_2 (SPP47) 148
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 143
Streptococcus hongkongensis (SP382) 141
Schaalia lingnae_[Not_Validly_Published] (SP133) 141
Fusobacterium multispecies_spp156_4 (SPP156) 141
Capnocytophaga sputigena (SP384) 141
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Caries Free plaque Caries Free plaque Caries Free plaque Caries Free plaque Caries Free plaque Caries saliva Caries saliva Caries saliva Caries saliva Caries saliva
Haemophilus multispecies_spp65_5 (SPP65) 1.0 5.00 12.0 30.00 2134.0 2.0 170.0 443.0 918.0 5740.0
Corynebacterium durum (SP144) 1.0 6.00 247.0 747.50 4436.0 1.0 8.0 20.0 48.0 469.0
Actinomyces multispecies_spp95_6 (SPP95) 1.0 426.75 935.0 1734.25 10382.0 1.0 36.0 75.0 170.0 1233.0
Haemophilus multispecies_spp61_3 (SPP61) 1.0 1.00 2.0 8.00 1021.0 1.0 20.5 79.0 278.0 3584.0
Porphyromonas sp. HMT930 (SP84) 1.0 2.00 6.0 15.25 806.0 1.0 38.0 165.0 419.5 3106.0
Rothia mucilaginosa (SP59) 1.0 2.00 4.0 10.00 592.0 1.0 29.0 84.0 198.0 2465.0
Streptococcus multispecies_spp8_6 (SPP8) 1.0 1.00 1.0 2.00 392.0 1.0 11.0 27.0 56.5 503.0
Streptococcus sanguinis (SP261) 1.0 567.75 1257.5 2291.75 9988.0 7.0 170.5 332.0 689.0 3274.0
Fusobacterium periodonticum (SP687) 1.0 1.00 3.5 10.00 384.0 1.0 16.5 52.0 166.0 1177.0
Bergeyella sp. HMT206 (SP520) 1.0 1.00 1.0 2.00 492.0 1.0 1.0 22.0 143.0 8330.0
Streptococcus multispecies_spp78_7 (SPP78) 1.0 3.00 6.0 15.00 9092.0 3.0 27.0 68.0 154.0 761.0
Eikenella halliae (SP19) 1.0 2.00 5.0 11.00 154.0 1.0 1.0 1.0 3.0 35.0
Prevotella melaninogenica (SP124) 1.0 1.00 3.0 10.00 1149.0 2.0 20.0 55.0 174.0 2449.0
Prevotella nanceiensis (SP475) 1.0 1.00 2.0 5.00 368.0 1.0 6.5 20.0 54.5 1294.0
Gemella multispecies_spp6_4 (SPP6) 1.0 24.00 68.0 151.25 2224.0 4.0 280.5 579.0 978.5 5360.0
Streptococcus multispecies_spp7_3 (SPP7) 1.0 2.00 6.0 16.00 9335.0 1.0 34.5 79.0 254.0 1820.0
Neisseria multispecies_spp181_4 (SPP181) 1.0 10.00 29.0 94.00 2223.0 1.0 107.5 301.0 650.0 4270.0
Prevotella histicola (SP2) 1.0 1.00 1.0 2.00 200.0 1.0 3.0 9.0 28.5 968.0
Haemophilus parahaemolyticus (SP274) 1.0 1.00 1.0 1.00 1212.0 1.0 1.0 6.0 71.0 3921.0
Granulicatella elegans (SP602) 1.0 6.00 15.0 38.00 720.0 1.0 68.0 165.0 380.5 2354.0
Abiotrophia defectiva (SP280) 1.0 40.50 142.0 332.25 3770.0 1.0 19.0 43.0 91.0 442.0
Lautropia mirabilis (SP652) 1.0 40.75 161.0 417.25 8308.0 1.0 18.0 44.0 86.5 897.0
Actinomyces multispecies_spp96_4 (SPP96) 1.0 1.00 5.0 13.25 160.0 1.0 1.0 2.0 3.0 49.0
Aggregatibacter multispecies_spp76_3 (SPP76) 1.0 1.00 5.0 46.00 1366.0 1.0 28.5 88.0 223.5 1482.0
Haemophilus parainfluenzae (SP81) 1.0 24.00 112.5 373.00 7524.0 19.0 504.0 870.0 1733.0 6190.0
multigenus multispecies_spp125_2 (SPP125) 1.0 47.25 179.5 532.50 6120.0 1.0 21.0 62.0 145.5 2699.0
Porphyromonas multispecies_spp174_3 (SPP174) 1.0 2.00 13.0 60.00 933.0 1.0 29.0 86.0 211.0 2604.0
Porphyromonas multispecies_spp175_2 (SPP175) 1.0 2.00 25.0 175.50 2109.0 1.0 85.0 181.0 365.5 1717.0
Bergeyella sp. HMT931 (SP9) 1.0 1.00 1.0 2.00 131.0 1.0 2.0 7.0 18.0 210.0
Oribacterium sinus (SP490) 1.0 1.00 1.0 1.00 33.0 1.0 2.0 5.0 12.0 147.0
Fusobacterium multispecies_spp97_2 (SPP97) 1.0 1.00 3.0 25.00 1867.0 1.0 9.0 33.0 95.0 1120.0
Cardiobacterium hominis (SP180) 1.0 11.75 71.0 178.50 1994.0 1.0 7.5 22.0 51.5 498.0
Streptococcus multispecies_spp85_18 (SPP85) 1.0 641.00 1329.0 2616.00 16350.0 674.0 2978.5 4710.0 6856.0 15734.0
multigenus multispecies_spp79_3 (SPP79) 1.0 1.00 1.0 2.25 89.0 1.0 1.0 7.0 20.0 224.0
Streptococcus multispecies_spp128_3 (SPP128) 1.0 1.00 3.0 6.00 26.0 1.0 7.0 11.0 16.5 73.0
Veillonella multispecies_spp5_2 (SPP5) 1.0 3.00 14.0 67.25 5305.0 2.0 27.5 90.0 280.0 2696.0
Schaalia multispecies_spp186_3 (SPP186) 1.0 1.00 2.0 17.00 334.0 1.0 1.0 2.0 4.0 70.0
Streptococcus multispecies_spp80_21 (SPP80) 1.0 2.00 6.0 13.00 188.0 1.0 12.5 21.0 33.5 125.0
Prevotella multispecies_spp10_3 (SPP10) 1.0 1.00 2.0 26.25 2335.0 1.0 5.0 25.0 93.0 1664.0
Alloprevotella sp. HMT308 (SP391) 1.0 1.00 1.0 2.00 49.0 1.0 2.0 4.0 12.0 322.0
Fusobacterium multispecies_spp51_2 (SPP51) 1.0 1.00 1.0 5.00 882.0 1.0 2.0 9.0 31.5 1625.0
Alloprevotella sp. HMT473 (SP513) 1.0 4.00 15.0 55.25 1554.0 1.0 13.0 86.0 317.5 4079.0
Leptotrichia sp. HMT215 (SP11) 1.0 1.00 2.0 7.00 481.0 1.0 4.0 13.0 29.5 297.0
Acinetobacter johnsonii (SP567) 1.0 1.00 1.0 2.00 523.0 1.0 1.0 1.0 1.0 4.0
Veillonella sp. HMT780 (SP75) 1.0 4.00 10.0 35.25 1230.0 1.0 13.0 53.0 172.0 1633.0
Leptotrichia hofstadii (SP528) 1.0 1.00 1.0 9.00 1171.0 1.0 2.0 14.0 63.5 1587.0
Arachnia multispecies_spp47_2 (SPP47) 1.0 1.00 1.0 5.25 387.0 1.0 1.0 1.0 3.0 18.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP371) 1.0 1.00 1.0 21.25 3519.0 1.0 1.0 1.0 5.0 305.0
Streptococcus hongkongensis (SP382) 1.0 1.00 1.0 1.00 22.0 1.0 1.0 2.0 5.0 35.0
Schaalia lingnae_[Not_Validly_Published] (SP133) 1.0 1.00 1.0 1.00 24.0 1.0 1.0 3.0 6.0 77.0
Fusobacterium multispecies_spp156_4 (SPP156) 1.0 4.00 62.0 205.75 1072.0 1.0 47.5 112.0 264.0 1243.0
Capnocytophaga sputigena (SP384) 1.0 40.75 195.5 463.50 5451.0 1.0 24.5 78.0 199.5 1272.0
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