q2_diversity : beta_group

	PERMANOVA results
method name	PERMANOVA
test statistic name	pseudo-F
sample size	758
number of groups	9
test statistic	2.75441
p-value	0.001
number of permutations	999

Pairwise permanova results

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		Sample size	Permutations	pseudo-F	p-value	q-value
Group 1	Group 2
AC plaque	C1 plaque	67	999	0.990661	0.414	0.435086
	C2.5 plaque	131	999	6.362864	0.001	0.003600
	C4 plaque	191	999	2.169521	0.008	0.018000
	C6.5 plaque	165	999	2.076268	0.014	0.028000
	CFAT plaque	209	999	3.722966	0.001	0.003600
	EC plaque	201	999	2.058392	0.017	0.032211
	missing plaque	152	999	3.606598	0.001	0.003600
	remin plaque	83	999	2.155054	0.010	0.021176
C1 plaque	C2.5 plaque	72	999	1.248373	0.191	0.237103
	C4 plaque	132	999	0.780848	0.638	0.638000
	C6.5 plaque	106	999	1.077593	0.338	0.392516
	CFAT plaque	150	999	1.353067	0.168	0.224000
	EC plaque	142	999	1.042817	0.372	0.418500
	missing plaque	93	999	1.305871	0.183	0.235286
	remin plaque	24	999	1.180928	0.268	0.321600
C2.5 plaque	C4 plaque	196	999	3.810778	0.001	0.003600
	C6.5 plaque	170	999	6.131462	0.001	0.003600
	CFAT plaque	214	999	3.885704	0.001	0.003600
	EC plaque	206	999	7.242555	0.001	0.003600
	missing plaque	157	999	4.410417	0.001	0.003600
	remin plaque	88	999	2.260428	0.008	0.018000
C4 plaque	C6.5 plaque	230	999	1.774395	0.031	0.050727
	CFAT plaque	274	999	2.826313	0.002	0.006545
	EC plaque	266	999	2.520659	0.003	0.009000
	missing plaque	217	999	2.333258	0.008	0.018000
	remin plaque	148	999	1.362691	0.141	0.195231
C6.5 plaque	CFAT plaque	248	999	2.271005	0.008	0.018000
	EC plaque	240	999	1.918808	0.025	0.045000
	missing plaque	191	999	1.709562	0.035	0.054783
	remin plaque	122	999	1.780854	0.028	0.048000
CFAT plaque	EC plaque	284	999	4.466983	0.001	0.003600
	missing plaque	235	999	1.002846	0.423	0.435086
	remin plaque	166	999	1.611636	0.057	0.085500
EC plaque	missing plaque	227	999	3.370264	0.001	0.003600
EC plaque	remin plaque	158	999	1.042556	0.386	0.421091
missing plaque	remin plaque	109	999	1.669672	0.071	0.102240

Overview

Group significance plots

Pairwise permanova results