q2_diversity : beta_group

	PERMANOVA results
method name	PERMANOVA
test statistic name	pseudo-F
sample size	758
number of groups	9
test statistic	3.18867
p-value	0.001
number of permutations	999

Pairwise permanova results

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		Sample size	Permutations	pseudo-F	p-value	q-value
Group 1	Group 2
AC plaque	C1 plaque	67	999	1.189355	0.330	0.396000
	C2.5 plaque	131	999	5.705450	0.001	0.006000
	C4 plaque	191	999	1.753055	0.133	0.228000
	C6.5 plaque	165	999	2.214342	0.046	0.103500
	CFAT plaque	209	999	4.714422	0.001	0.006000
	EC plaque	201	999	3.354418	0.010	0.027692
	missing plaque	152	999	4.339765	0.002	0.009000
	remin plaque	83	999	2.143842	0.070	0.136421
C1 plaque	C2.5 plaque	72	999	1.355404	0.232	0.334080
	C4 plaque	132	999	0.685283	0.606	0.611000
	C6.5 plaque	106	999	1.108241	0.363	0.408375
	CFAT plaque	150	999	1.902097	0.118	0.212400
	EC plaque	142	999	1.141304	0.350	0.406452
	missing plaque	93	999	1.481868	0.193	0.289500
	remin plaque	24	999	1.380758	0.246	0.340615
C2.5 plaque	C4 plaque	196	999	3.592291	0.009	0.027000
	C6.5 plaque	170	999	5.065723	0.002	0.009000
	CFAT plaque	214	999	3.495127	0.009	0.027000
	EC plaque	206	999	8.732476	0.001	0.006000
	missing plaque	157	999	3.293452	0.007	0.025200
	remin plaque	88	999	1.999813	0.065	0.136421
C4 plaque	C6.5 plaque	230	999	1.193233	0.284	0.378000
	CFAT plaque	274	999	4.774025	0.001	0.006000
	EC plaque	266	999	3.433468	0.006	0.024000
	missing plaque	217	999	2.013238	0.072	0.136421
	remin plaque	148	999	0.867139	0.494	0.538909
C6.5 plaque	CFAT plaque	248	999	3.135328	0.013	0.033429
	EC plaque	240	999	2.444379	0.036	0.086400
	missing plaque	191	999	1.638335	0.150	0.241043
	remin plaque	122	999	1.249663	0.294	0.378000
CFAT plaque	EC plaque	284	999	8.928800	0.001	0.006000
	missing plaque	235	999	0.714862	0.611	0.611000
	remin plaque	166	999	1.705132	0.154	0.241043
EC plaque	missing plaque	227	999	5.486472	0.001	0.006000
EC plaque	remin plaque	158	999	0.817523	0.566	0.599294
missing plaque	remin plaque	109	999	1.200257	0.326	0.396000

Overview

Group significance plots

Pairwise permanova results