QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus danieliae (SP1) 3217
Lactobacillus johnsonii (SP15) 3217
multigenus multispecies_spp97_2 (SPP97) 3217
Pseudomonas aeruginosa (SP187) 3217
Listeria monocytogenes (SP85) 3217
Escherichia fergusonii (SP41) 3217
Phyllobacterium myrsinacearum (SP33) 3217
Citrobacter koseri (SP14) 3217
Salmonella enterica (SP174) 3217
Escherichia coli (SP37) 3217
Limosilactobacillus fermentum (SP16) 3217
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.972% (SPN204) 3217
Staphylococcus multispecies_spp18_3 (SPP18) 3216
Mesorhizobium huakuii (SP10) 3216
Shigella boydii (SP31) 3215
Bacillus multispecies_spp110_2 (SPP110) 3215
Burkholderia multispecies_spp74_3 (SPP74) 3215
Shigella sonnei (SP5) 3215
Shigella flexneri (SP157) 3214
Streptococcus multispecies_spp100_3 (SPP100) 3214
Staphylococcus multispecies_spp19_2 (SPP19) 3214
Listeria monocytogenes_nov_97.796% (SPN595) 3213
multigenus multispecies_spp78_8 (SPP78) 3213
Burkholderia multispecies_spp79_5 (SPP79) 3213
multigenus multispecies_spp60_3 (SPP60) 3210
multigenus multispecies_spp42_2 (SPP42) 3209
Staphylococcus hominis (SP114) 3209
multigenus multispecies_spp32_2 (SPP32) 3207
Corynebacterium mucifaciens (SP73) 3207
Burkholderia multispecies_spp75_4 (SPP75) 3206
Bosea multispecies_spp99_2 (SPP99) 3204
multigenus multispecies_spp81_4 (SPP81) 3202
Streptococcus danieliae_nov_97.379% (SPN1037) 3201
multigenus multispecies_spp26_4 (SPP26) 3200
Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.537% (SPN738) 3200
Streptococcus sp._MOT-012 (SP2) 3200
Corynebacterium pilbarense (SP122) 3196
Veillonella parvula (SP128) 3196
Anaeromassilibacillus senegalensis_nov_93.008% (SPN655) 3196
Streptococcus chosunense (SP72) 3196
Streptococcus danieliae_nov_96.787% (SPN561) 3195
Akkermansia muciniphila (SP50) 3193
Mammaliicoccus sciuri (SP7) 3193
Arthrobacter russicus (SP69) 3192
Thermus thermophilus (SP228) 3191
Lawsonella clevelandensis (SP336) 3191
Enterococcus camelliae (SP4) 3191
multigenus multispecies_spp59_2 (SPP59) 3190
Burkholderia multispecies_spp80_6 (SPP80) 3190
Pseudomonas aestus (SP94) 3189
Actinomyces polynesiensis_nov_97.183% (SPN1063) 3189
Duncaniella freteri_nov_91.952% (SPN677) 3189
Duncaniella freteri_nov_88.577% (SPN1181) 3189
Faecalibaculum rodentium (SP12) 3185
Parageobacillus toebii (SP118) 3185
Duncaniella freteri_nov_89.780% (SPN1292) 3184
Burkholderia cepacia (SP53) 3184
Prevotella shahii_nov_87.903% (SPN81) 3182
Stenotrophomonas maltophilia (SP100) 3180
Duncaniella freteri_nov_86.373% (SPN1521) 3179
Streptococcus danieliae_nov_95.582% (SPN150) 3179
Eubacteriales_[G-1] bacterium_MOT-159 (SP139) 3179
Neisseria multispecies_spp113_3 (SPP113) 3177
Adlercreutzia caecimuris_nov_92.903% (SPN1347) 3176
Corynebacterium tuberculostearicum (SP23) 3175
Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.870% (SPN318) 3170
Burkholderia lata (SP44) 3168
Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.703% (SPN798) 3167
Escherichia albertii (SP6) 3162
Staphylococcus ureilyticus (SP26) 3156
Rothia mucilaginosa (SP234) 3155
Murimonas sp._strain_[WYJ26-X68]_nov_94.105% (SPN914) 3151
Deinococcus geothermalis (SP213) 3151
Haemophilus parainfluenzae (SP149) 3150
Duncaniella freteri_nov_87.976% (SPN562) 3141
Acidipropionibacterium thoenii (SP127) 3134
Phyllobacterium salinisoli (SP396) 3132
Tetragenococcus halophilus (SP232) 3130
Bacillus multispecies_spp28_3 (SPP28) 3129
Tessaracoccus lapidicaptus (SP358) 3126
Mycolicibacterium mucogenicum (SP236) 3126
Enterococcus gallinarum (SP11) 3124
Methylorubrum extorquens (SP297) 3118
Segetibacter koreensis_nov_89.733% (SPN1359) 3114
Acetivibrio sp._strain_[D16-59]_nov_90.812% (SPN192) 3113
Blastococcus multispecies_spp7_2 (SPP7) 3111
Kineothrix alysoides_nov_88.866% (SPN184) 3111
Burkholderia cenocepacia (SP446) 3110
Micrococcus aloeverae (SP329) 3106
Anaerotignum sp._strain_[D16-54]_nov_97.357% (SPN162) 3101
Clostridium disporicum (SP52) 3098
Cutibacterium granulosum (SP32) 3091
Methylobacterium brachiatum (SP256) 3084
Corynebacterium accolens (SP192) 3081
Ligilactobacillus murinus (SP3) 3080
Herbiconiux moechotypicola (SP21) 3075
Faecalicatena fissicatena_nov_94.824% (SPN714) 3075
Shigella multispecies_spp31_2 (SPP31) 3068
Escherichia coli (SPN781) 3067
Streptococcus salivarius (SP42) 3061
Burkholderia multispecies_spp82_4 (SPP82) 3059
Actinomyces polynesiensis (SP40) 3051
Eikenella longinqua_nov_89.271% (SPN136) 3049
Staphylococcus haemolyticus (SP361) 3033
Kosakonia cowanii (SP448) 3031
Veillonella dispar (SP116) 3031
Prevotella shahii_nov_85.312% (SPN1721) 3029
Defluviimonas aquaemixtae_nov_93.960% (SPN237) 3026
Streptococcus danieliae_nov_93.952% (SPN1146) 3019
Massilia aurea (SP180) 3006
Adlercreutzia caecimuris_nov_89.270% (SPN832) 2994
Sphingobium yanoikuyae (SP282) 2991
Bacillus multispecies_spp40_2 (SPP40) 2981
Mucispirillum schaedleri (SP104) 2971
Streptococcus danieliae_nov_93.387% (SPN82) 2969
Streptococcus danieliae_nov_96.976% (SPN502) 2963
Achromobacter multispecies_spp65_2 (SPP65) 2950
Lactobacillus multispecies_spp33_2 (SPP33) 2945
Acinetobacter septicus (SP412) 2905
Prosthecobacter fluviatilis_nov_97.149% (SPN555) 2903
Streptococcus pseudopneumoniae (SP67) 2903
Herbaspirillum huttiense (SP182) 2899
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Negative Negative Negative Negative Negative Week_0 Week_0 Week_0 Week_0 Week_0 Week_8 Week_8 Week_8 Week_8 Week_8 Zymo_mock Zymo_mock Zymo_mock Zymo_mock Zymo_mock
Streptococcus danieliae (SP1) 445.0 496.0 529.0 637.0 1939.0 1.0 2.0 7.0 20.0 106826.0 382.0 664.00 8540.0 113822.25 252891.0 1593.0 1593.0 1593.0 1593.0 1593.0
Lactobacillus johnsonii (SP15) 1.0 2.0 3.0 5.0 13.0 1.0 37.0 746.0 3204.0 14989.0 1.0 8.00 12.0 399.75 5817.0 5.0 5.0 5.0 5.0 5.0
multigenus multispecies_spp97_2 (SPP97) 10.0 16.0 525.0 2312.0 2789.0 1.0 1.0 1.0 1.0 165.0 1.0 1.00 3.0 5.00 878.0 63.0 63.0 63.0 63.0 63.0
Pseudomonas aeruginosa (SP187) 1.0 2.0 2.0 11.0 129.0 1.0 1.0 1.0 1.0 112.0 1.0 1.00 1.0 2.00 255.0 227.0 227.0 227.0 227.0 227.0
Listeria monocytogenes (SP85) 2.0 3.0 36.0 273.0 589.0 1.0 1.0 1.0 1.0 4.0 1.0 1.00 1.5 4.00 127.0 6371.0 6371.0 6371.0 6371.0 6371.0
Escherichia fergusonii (SP41) 4.0 9.0 115.0 694.0 2250.0 1.0 1.0 1.0 1.0 771.0 1.0 1.00 3.0 7.00 4010.0 40.0 40.0 40.0 40.0 40.0
Phyllobacterium myrsinacearum (SP33) 269.0 1706.0 2557.0 5413.0 18514.0 1.0 1.0 1.0 28.0 559.0 1.0 3.00 6.0 14.00 107.0 18.0 18.0 18.0 18.0 18.0
Citrobacter koseri (SP14) 1.0 2.0 12.0 67.0 174.0 1.0 1.0 1.0 1.0 3.0 1.0 1.00 1.0 2.00 637.0 16.0 16.0 16.0 16.0 16.0
Salmonella enterica (SP174) 1.0 2.0 32.0 89.0 181.0 1.0 1.0 1.0 1.0 7.0 1.0 1.00 1.0 2.00 73.0 867.0 867.0 867.0 867.0 867.0
Escherichia coli (SP37) 99.0 174.0 2920.0 15692.0 21265.0 1.0 1.0 1.0 1.0 370.0 1.0 7.00 14.0 30.50 4963.0 191.0 191.0 191.0 191.0 191.0
Limosilactobacillus fermentum (SP16) 1.0 1.0 30.0 222.0 377.0 1.0 1.0 1.0 1.0 8.0 1.0 1.00 1.0 3.00 78.0 5612.0 5612.0 5612.0 5612.0 5612.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.972% (SPN204) 1.0 1.0 2.0 19.0 26.0 1.0 1.0 46.0 649.0 10540.0 1.0 1.00 1.0 5.00 4393.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 3.0 77.0 156.0 380.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 2.00 90.0 4255.0 4255.0 4255.0 4255.0 4255.0
Mesorhizobium huakuii (SP10) 5.0 9.0 40.0 302.0 1749.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 9.0 2.0 2.0 2.0 2.0 2.0
Shigella boydii (SP31) 26.0 36.0 685.0 4098.0 4715.0 1.0 1.0 1.0 1.0 162.0 1.0 2.00 4.0 9.00 1330.0 70.0 70.0 70.0 70.0 70.0
Bacillus multispecies_spp110_2 (SPP110) 4.0 6.0 67.0 355.0 881.0 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 3.00 99.0 3751.0 3751.0 3751.0 3751.0 3751.0
Burkholderia multispecies_spp74_3 (SPP74) 114.0 171.0 2989.0 13027.0 54248.0 1.0 1.0 1.0 1.0 1.0 1.0 2.00 6.0 17.50 860.0 41.0 41.0 41.0 41.0 41.0
Shigella sonnei (SP5) 27.0 40.0 831.0 3849.0 7665.0 1.0 1.0 1.0 1.0 192.0 1.0 2.00 5.5 12.00 1420.0 259.0 259.0 259.0 259.0 259.0
Shigella flexneri (SP157) 1.0 2.0 50.0 316.0 1039.0 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 2.00 593.0 21.0 21.0 21.0 21.0 21.0
Streptococcus multispecies_spp100_3 (SPP100) 4.0 39.0 106.0 154.0 1500.0 1.0 1.0 1.0 4.0 103.0 1.0 1.00 1.0 1.25 67.0 2.0 2.0 2.0 2.0 2.0
Staphylococcus multispecies_spp19_2 (SPP19) 1.0 19.0 85.0 403.0 1294.0 1.0 1.0 1.0 14.0 2118.0 1.0 1.00 1.0 2.00 49.0 2.0 2.0 2.0 2.0 2.0
Listeria monocytogenes_nov_97.796% (SPN595) 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 71.0 71.0 71.0 71.0 71.0
multigenus multispecies_spp78_8 (SPP78) 3.0 6.0 59.0 212.0 769.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 5.0 4.0 4.0 4.0 4.0 4.0
Burkholderia multispecies_spp79_5 (SPP79) 2.0 7.0 60.0 264.0 1108.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 18.0 1.0 1.0 1.0 1.0 1.0
multigenus multispecies_spp60_3 (SPP60) 2.0 4.0 59.0 222.0 286.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 2.00 65.0 4.0 4.0 4.0 4.0 4.0
multigenus multispecies_spp42_2 (SPP42) 2.0 9.0 13.0 104.0 5144.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 14.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus hominis (SP114) 2.0 6.0 12.0 263.0 840.0 1.0 1.0 1.0 14.0 654.0 1.0 1.00 1.0 2.00 58.0 2.0 2.0 2.0 2.0 2.0
multigenus multispecies_spp32_2 (SPP32) 1.0 4.0 24.0 138.0 448.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 14.0 3.0 3.0 3.0 3.0 3.0
Corynebacterium mucifaciens (SP73) 3.0 4.0 44.0 200.0 647.0 1.0 1.0 1.0 2.0 354.0 1.0 1.00 1.0 1.00 24.0 1.0 1.0 1.0 1.0 1.0
Burkholderia multispecies_spp75_4 (SPP75) 1.0 3.0 10.0 79.0 334.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 2.0 2.0 2.0 2.0 2.0
Bosea multispecies_spp99_2 (SPP99) 1.0 22.0 27.0 111.0 768.0 1.0 1.0 1.0 1.0 24.0 1.0 1.00 1.0 1.00 7.0 1.0 1.0 1.0 1.0 1.0
multigenus multispecies_spp81_4 (SPP81) 1.0 2.0 14.0 53.0 176.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Streptococcus danieliae_nov_97.379% (SPN1037) 1.0 1.0 11.0 15.0 21.0 1.0 1.0 1.0 1.0 1042.0 1.0 1.00 23.0 3822.50 13906.0 57.0 57.0 57.0 57.0 57.0
multigenus multispecies_spp26_4 (SPP26) 1.0 2.0 11.0 48.0 73.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 14.0 4.0 4.0 4.0 4.0 4.0
Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.537% (SPN738) 1.0 1.0 1.0 1.0 4.0 1.0 1.0 3.0 17.0 420.0 1.0 1.00 1.0 1.00 57.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp._MOT-012 (SP2) 8.0 15.0 27.0 67.0 324.0 1.0 1.0 2.0 41.0 33401.0 4.0 35.75 112.5 1778.75 126030.0 75.0 75.0 75.0 75.0 75.0
Corynebacterium pilbarense (SP122) 1.0 2.0 3.0 279.0 507.0 1.0 1.0 1.0 5.0 126.0 1.0 1.00 1.0 2.00 17.0 1.0 1.0 1.0 1.0 1.0
Veillonella parvula (SP128) 1.0 3.0 7.0 122.0 333.0 1.0 1.0 1.0 1.0 19.0 1.0 1.00 1.0 1.00 28.0 1.0 1.0 1.0 1.0 1.0
Anaeromassilibacillus senegalensis_nov_93.008% (SPN655) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 11.0 622.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus chosunense (SP72) 4.0 9.0 17.0 78.0 4009.0 1.0 1.0 1.0 2.0 81.0 1.0 1.00 1.0 2.00 74.0 3.0 3.0 3.0 3.0 3.0
Streptococcus danieliae_nov_96.787% (SPN561) 1.0 2.0 2.0 8.0 12.0 1.0 1.0 1.0 1.0 419.0 1.0 2.00 31.5 943.50 6610.0 3.0 3.0 3.0 3.0 3.0
Akkermansia muciniphila (SP50) 3.0 9.0 10.0 11.0 14.0 1.0 1.0 4.0 16.0 3761.0 3.0 11.75 27.5 324.00 13432.0 5.0 5.0 5.0 5.0 5.0
Mammaliicoccus sciuri (SP7) 2.0 5.0 6.0 8.0 10.0 1.0 1.0 1.0 1.0 220.0 1.0 5.00 9.5 75.00 8356.0 6.0 6.0 6.0 6.0 6.0
Arthrobacter russicus (SP69) 1.0 3.0 6.0 34.0 233.0 1.0 1.0 1.0 1.0 21.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Thermus thermophilus (SP228) 1.0 2.0 7.0 51.0 779.0 1.0 1.0 1.0 1.0 14.0 1.0 1.00 1.0 1.00 5.0 1.0 1.0 1.0 1.0 1.0
Lawsonella clevelandensis (SP336) 1.0 2.0 3.0 24.0 127.0 1.0 1.0 1.0 2.0 71.0 1.0 1.00 1.0 1.00 8.0 1.0 1.0 1.0 1.0 1.0
Enterococcus camelliae (SP4) 1.0 1.0 2.0 5.0 8.0 1.0 1.0 1.0 1.0 1679.0 1.0 6.00 11.5 20.00 4239.0 4.0 4.0 4.0 4.0 4.0
multigenus multispecies_spp59_2 (SPP59) 1.0 1.0 9.0 33.0 95.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 102.0 2.0 2.0 2.0 2.0 2.0
Burkholderia multispecies_spp80_6 (SPP80) 1.0 2.0 8.0 13.0 68.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 2.0 2.0 2.0 2.0 2.0
Pseudomonas aestus (SP94) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 10.0 1686.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Actinomyces polynesiensis_nov_97.183% (SPN1063) 1.0 1.0 2.0 3.0 5.0 1.0 1.0 1.0 1.0 636.0 1.0 4.00 8.0 15.00 4200.0 4.0 4.0 4.0 4.0 4.0
Duncaniella freteri_nov_91.952% (SPN677) 3.0 5.0 8.0 9.0 537.0 1.0 1.0 2.0 60.0 1407.0 2.0 11.00 43.0 1090.75 6238.0 5.0 5.0 5.0 5.0 5.0
Duncaniella freteri_nov_88.577% (SPN1181) 2.0 2.0 3.0 4.0 421.0 1.0 1.0 1.0 5.0 881.0 1.0 5.00 9.0 253.00 3731.0 2.0 2.0 2.0 2.0 2.0
Faecalibaculum rodentium (SP12) 1.0 3.0 3.0 5.0 7.0 1.0 1.0 1.0 5.0 179.0 1.0 6.00 9.0 75.75 5504.0 2.0 2.0 2.0 2.0 2.0
Parageobacillus toebii (SP118) 1.0 3.0 15.0 28.0 182.0 1.0 1.0 1.0 1.0 46.0 1.0 1.00 1.0 1.00 7.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_89.780% (SPN1292) 1.0 2.0 3.0 4.0 4.0 1.0 1.0 1.0 13.0 1160.0 1.0 4.00 21.5 479.75 2335.0 2.0 2.0 2.0 2.0 2.0
Burkholderia cepacia (SP53) 1.0 1.0 7.0 21.0 80.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Prevotella shahii_nov_87.903% (SPN81) 4.0 6.0 9.0 11.0 17.0 1.0 1.0 3.0 67.0 4622.0 3.0 14.75 30.0 1380.75 13238.0 10.0 10.0 10.0 10.0 10.0
Stenotrophomonas maltophilia (SP100) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 3266.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_86.373% (SPN1521) 1.0 1.0 2.0 3.0 110.0 1.0 1.0 1.0 7.0 317.0 1.0 3.00 8.5 389.50 1678.0 3.0 3.0 3.0 3.0 3.0
Streptococcus danieliae_nov_95.582% (SPN150) 1.0 2.0 3.0 5.0 7.0 1.0 1.0 1.0 1.0 297.0 1.0 2.00 7.0 667.00 2833.0 2.0 2.0 2.0 2.0 2.0
Eubacteriales_[G-1] bacterium_MOT-159 (SP139) 1.0 2.0 3.0 3.0 6.0 1.0 1.0 1.0 2.0 68.0 1.0 3.00 7.5 56.25 4691.0 1.0 1.0 1.0 1.0 1.0
Neisseria multispecies_spp113_3 (SPP113) 1.0 2.0 3.0 79.0 216.0 1.0 1.0 1.0 1.0 23.0 1.0 1.00 1.0 1.00 14.0 1.0 1.0 1.0 1.0 1.0
Adlercreutzia caecimuris_nov_92.903% (SPN1347) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 10.0 143.0 1.0 1.00 1.0 1.00 15.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium tuberculostearicum (SP23) 1.0 3.0 32.0 170.0 756.0 1.0 1.0 1.0 4.0 70.0 1.0 1.00 1.0 2.00 813.0 1.0 1.0 1.0 1.0 1.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.870% (SPN318) 2.0 3.0 3.0 9.0 12.0 1.0 1.0 2.0 46.0 3819.0 1.0 8.00 16.0 788.00 6310.0 7.0 7.0 7.0 7.0 7.0
Burkholderia lata (SP44) 1.0 1.0 3.0 13.0 56.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.703% (SPN798) 1.0 3.0 3.0 4.0 10.0 1.0 1.0 3.0 34.0 4081.0 1.0 6.00 20.5 534.00 7330.0 8.0 8.0 8.0 8.0 8.0
Escherichia albertii (SP6) 1.0 1.0 2.0 5.0 17.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 6.0 6.0 6.0 6.0 6.0
Staphylococcus ureilyticus (SP26) 1.0 1.0 1.0 4.0 5.0 1.0 1.0 1.0 1.0 179.0 1.0 2.00 6.0 30.25 5408.0 3.0 3.0 3.0 3.0 3.0
Rothia mucilaginosa (SP234) 1.0 2.0 2.0 16.0 455.0 1.0 1.0 1.0 1.0 32.0 1.0 1.00 1.0 1.00 13.0 1.0 1.0 1.0 1.0 1.0
Murimonas sp._strain_[WYJ26-X68]_nov_94.105% (SPN914) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 16.0 365.0 1.0 1.00 1.0 1.00 37.0 1.0 1.0 1.0 1.0 1.0
Deinococcus geothermalis (SP213) 1.0 1.0 2.0 6.0 281.0 1.0 1.0 1.0 1.0 9.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Haemophilus parainfluenzae (SP149) 1.0 2.0 3.0 12.0 554.0 1.0 1.0 1.0 1.0 137.0 1.0 1.00 1.0 1.00 7.0 2.0 2.0 2.0 2.0 2.0
Duncaniella freteri_nov_87.976% (SPN562) 1.0 1.0 1.0 2.0 5.0 1.0 1.0 1.0 1.0 26.0 1.0 1.00 2.0 23.25 389.0 1.0 1.0 1.0 1.0 1.0
Acidipropionibacterium thoenii (SP127) 1.0 1.0 2.0 3.0 4.0 1.0 1.0 1.0 1.0 53.0 1.0 2.00 3.0 6.00 1029.0 2.0 2.0 2.0 2.0 2.0
Phyllobacterium salinisoli (SP396) 1.0 1.0 2.0 7.0 80.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Tetragenococcus halophilus (SP232) 1.0 1.0 2.0 13.0 59.0 1.0 1.0 1.0 1.0 10.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Bacillus multispecies_spp28_3 (SPP28) 1.0 1.0 1.0 2.0 7.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 16.0 16.0 16.0 16.0 16.0
Tessaracoccus lapidicaptus (SP358) 1.0 2.0 2.0 3.0 634.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Mycolicibacterium mucogenicum (SP236) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 186.0 1.0 1.00 1.0 1.00 5.0 1.0 1.0 1.0 1.0 1.0
Enterococcus gallinarum (SP11) 1.0 1.0 1.0 2.0 5.0 1.0 1.0 1.0 1.0 4599.0 1.0 2.00 7.0 14.00 11345.0 6.0 6.0 6.0 6.0 6.0
Methylorubrum extorquens (SP297) 1.0 1.0 2.0 19.0 165.0 1.0 1.0 1.0 1.0 58.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Segetibacter koreensis_nov_89.733% (SPN1359) 1.0 1.0 3.0 4.0 1168.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Acetivibrio sp._strain_[D16-59]_nov_90.812% (SPN192) 1.0 1.0 1.0 2.0 4.0 1.0 1.0 1.0 1.0 39.0 1.0 1.00 2.0 5.00 4376.0 1.0 1.0 1.0 1.0 1.0
Blastococcus multispecies_spp7_2 (SPP7) 1.0 1.0 2.0 3.0 768.0 1.0 1.0 1.0 1.0 9.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Kineothrix alysoides_nov_88.866% (SPN184) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 43.0 1.0 1.00 1.0 1.00 26.0 1.0 1.0 1.0 1.0 1.0
Burkholderia cenocepacia (SP446) 1.0 1.0 3.0 7.0 19.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Micrococcus aloeverae (SP329) 1.0 1.0 1.0 42.0 268.0 1.0 1.0 1.0 1.0 24.0 1.0 1.00 1.0 1.00 8.0 1.0 1.0 1.0 1.0 1.0
Anaerotignum sp._strain_[D16-54]_nov_97.357% (SPN162) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 98.0 1.0 1.00 1.0 1.00 16.0 1.0 1.0 1.0 1.0 1.0
Clostridium disporicum (SP52) 4.0 5.0 6.0 8.0 28.0 1.0 1.0 5.0 56.0 6765.0 2.0 11.00 23.0 252.25 7319.0 5.0 5.0 5.0 5.0 5.0
Cutibacterium granulosum (SP32) 1.0 2.0 24.0 83.0 389.0 1.0 1.0 1.0 5.0 188.0 1.0 1.00 1.0 3.00 2169.0 1.0 1.0 1.0 1.0 1.0
Methylobacterium brachiatum (SP256) 1.0 2.0 2.0 3.0 784.0 1.0 1.0 1.0 1.0 19.0 1.0 1.00 1.0 1.00 77.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium accolens (SP192) 1.0 1.0 2.0 58.0 412.0 1.0 1.0 1.0 1.0 68.0 1.0 1.00 1.0 1.00 21.0 1.0 1.0 1.0 1.0 1.0
Ligilactobacillus murinus (SP3) 1.0 6.0 20.0 27.0 55.0 1.0 1.0 19.0 773.0 30577.0 1.0 44.75 224.0 2025.25 34589.0 45.0 45.0 45.0 45.0 45.0
Herbiconiux moechotypicola (SP21) 1.0 1.0 2.0 3.0 582.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Faecalicatena fissicatena_nov_94.824% (SPN714) 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 2.0 5.25 576.0 2.0 2.0 2.0 2.0 2.0
Shigella multispecies_spp31_2 (SPP31) 1.0 1.0 2.0 9.0 19.0 1.0 1.0 1.0 1.0 3.0 1.0 1.00 1.0 1.00 24.0 1.0 1.0 1.0 1.0 1.0
Escherichia coli (SPN781) 1.0 1.0 3.0 5.0 17.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus salivarius (SP42) 1.0 1.0 1.0 3.0 15.0 1.0 1.0 1.0 4.0 92.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Burkholderia multispecies_spp82_4 (SPP82) 1.0 1.0 1.0 7.0 29.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces polynesiensis (SP40) 1.0 1.0 1.0 2.0 4.0 1.0 1.0 1.0 1.0 488.0 1.0 2.00 3.0 5.00 910.0 1.0 1.0 1.0 1.0 1.0
Eikenella longinqua_nov_89.271% (SPN136) 1.0 1.0 2.0 7.0 333.0 1.0 1.0 1.0 2.0 36.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus haemolyticus (SP361) 1.0 1.0 1.0 3.0 429.0 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Kosakonia cowanii (SP448) 1.0 1.0 2.0 7.0 11.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Veillonella dispar (SP116) 1.0 1.0 2.0 7.0 429.0 1.0 1.0 1.0 1.0 15.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Prevotella shahii_nov_85.312% (SPN1721) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 12.00 112.0 1.0 1.0 1.0 1.0 1.0
Defluviimonas aquaemixtae_nov_93.960% (SPN237) 1.0 1.0 2.0 3.0 346.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Streptococcus danieliae_nov_93.952% (SPN1146) 1.0 1.0 2.0 3.0 6.0 1.0 1.0 1.0 1.0 2083.0 1.0 1.00 5.0 109.00 6802.0 1.0 1.0 1.0 1.0 1.0
Massilia aurea (SP180) 1.0 1.0 1.0 2.0 93.0 1.0 1.0 1.0 2.0 148.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Adlercreutzia caecimuris_nov_89.270% (SPN832) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 37.0 1.0 1.00 2.0 23.00 207.0 1.0 1.0 1.0 1.0 1.0
Sphingobium yanoikuyae (SP282) 1.0 1.0 2.0 3.0 355.0 1.0 1.0 1.0 1.0 144.0 1.0 1.00 1.0 1.00 6.0 1.0 1.0 1.0 1.0 1.0
Bacillus multispecies_spp40_2 (SPP40) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 1.0 1.00 1.0 1.00 1.0 11.0 11.0 11.0 11.0 11.0
Mucispirillum schaedleri (SP104) 1.0 1.0 1.0 1.0 3.0 1.0 1.0 1.0 1.0 28.0 1.0 1.00 2.0 8.00 5101.0 2.0 2.0 2.0 2.0 2.0
Streptococcus danieliae_nov_93.387% (SPN82) 1.0 1.0 1.0 1.0 4.0 1.0 1.0 1.0 1.0 176.0 1.0 1.00 1.0 72.25 2682.0 2.0 2.0 2.0 2.0 2.0
Streptococcus danieliae_nov_96.976% (SPN502) 1.0 1.0 1.0 1.0 3.0 1.0 1.0 1.0 1.0 49.0 1.0 1.00 1.5 31.25 368.0 2.0 2.0 2.0 2.0 2.0
Achromobacter multispecies_spp65_2 (SPP65) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 4241.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Lactobacillus multispecies_spp33_2 (SPP33) 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 3.0 10.0 1.0 1.00 2.0 27.50 490.0 1.0 1.0 1.0 1.0 1.0
Acinetobacter septicus (SP412) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 79.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Prosthecobacter fluviatilis_nov_97.149% (SPN555) 1.0 1.0 2.0 2.0 83.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus pseudopneumoniae (SP67) 1.0 1.0 1.0 3.0 36.0 1.0 1.0 1.0 1.0 4.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Herbaspirillum huttiense (SP182) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 234.0 1.0 1.00 1.0 1.00 5.0 1.0 1.0 1.0 1.0 1.0
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