QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus danieliae (SP1) 210
Listeria monocytogenes (SP85) 210
multigenus multispecies_spp97_2 (SPP97) 210
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.972% (SPN204) 210
Escherichia fergusonii (SP41) 210
Escherichia coli (SP37) 210
Phyllobacterium myrsinacearum (SP33) 210
Salmonella enterica (SP174) 210
Limosilactobacillus fermentum (SP16) 210
Lactobacillus johnsonii (SP15) 210
Staphylococcus multispecies_spp18_3 (SPP18) 209
Mesorhizobium huakuii (SP10) 209
Shigella sonnei (SP5) 208
Shigella flexneri (SP157) 208
Streptococcus multispecies_spp100_3 (SPP100) 208
Bacillus multispecies_spp110_2 (SPP110) 208
Shigella boydii (SP31) 208
Burkholderia multispecies_spp74_3 (SPP74) 208
Staphylococcus multispecies_spp19_2 (SPP19) 207
multigenus multispecies_spp78_8 (SPP78) 207
Burkholderia multispecies_spp79_5 (SPP79) 206
Staphylococcus hominis (SP114) 205
Streptococcus chosunense (SP72) 204
multigenus multispecies_spp42_2 (SPP42) 204
Corynebacterium mucifaciens (SP73) 202
Corynebacterium pilbarense (SP122) 202
Cutibacterium granulosum (SP32) 202
Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.537% (SPN738) 200
Corynebacterium tuberculostearicum (SP23) 199
Anaeromassilibacillus senegalensis_nov_93.008% (SPN655) 196
Streptococcus mitis (SP66) 194
Streptococcus danieliae_nov_97.379% (SPN1037) 194
Streptococcus sp._MOT-012 (SP2) 193
Pseudomonas aestus (SP94) 191
Cutibacterium acnes (SP13) 190
Stenotrophomonas maltophilia (SP100) 189
Streptococcus danieliae_nov_96.787% (SPN561) 188
Mammaliicoccus sciuri (SP7) 186
Akkermansia muciniphila (SP50) 186
Enterococcus camelliae (SP4) 184
Duncaniella freteri_nov_88.577% (SPN1181) 182
Duncaniella freteri_nov_91.952% (SPN677) 182
Actinomyces polynesiensis_nov_97.183% (SPN1063) 182
Faecalibaculum rodentium (SP12) 178
Murimonas sp._strain_[WYJ26-X68]_nov_94.105% (SPN914) 178
Duncaniella freteri_nov_89.780% (SPN1292) 177
Prevotella shahii_nov_87.903% (SPN81) 175
Eubacteriales_[G-1] bacterium_MOT-159 (SP139) 172
Duncaniella freteri_nov_86.373% (SPN1521) 172
Streptococcus danieliae_nov_95.582% (SPN150) 172
Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.870% (SPN318) 163
Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.703% (SPN798) 161
Achromobacter multispecies_spp65_2 (SPP65) 158
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Negative Negative Negative Negative Negative Week_0 Week_0 Week_0 Week_0 Week_0 Week_8 Week_8 Week_8 Week_8 Week_8 Zymo_mock Zymo_mock Zymo_mock Zymo_mock Zymo_mock
Streptococcus danieliae (SP1) 445.0 496.0 529.0 637.0 1939.0 1.0 2.0 7.0 20.0 106826.0 382.0 664.00 8540.0 113822.25 252891.0 1593.0 1593.0 1593.0 1593.0 1593.0
Listeria monocytogenes (SP85) 2.0 3.0 36.0 273.0 589.0 1.0 1.0 1.0 1.0 4.0 1.0 1.00 1.5 4.00 127.0 6371.0 6371.0 6371.0 6371.0 6371.0
multigenus multispecies_spp97_2 (SPP97) 10.0 16.0 525.0 2312.0 2789.0 1.0 1.0 1.0 1.0 165.0 1.0 1.00 3.0 5.00 878.0 63.0 63.0 63.0 63.0 63.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.972% (SPN204) 1.0 1.0 2.0 19.0 26.0 1.0 1.0 46.0 649.0 10540.0 1.0 1.00 1.0 5.00 4393.0 1.0 1.0 1.0 1.0 1.0
Escherichia fergusonii (SP41) 4.0 9.0 115.0 694.0 2250.0 1.0 1.0 1.0 1.0 771.0 1.0 1.00 3.0 7.00 4010.0 40.0 40.0 40.0 40.0 40.0
Escherichia coli (SP37) 99.0 174.0 2920.0 15692.0 21265.0 1.0 1.0 1.0 1.0 370.0 1.0 7.00 14.0 30.50 4963.0 191.0 191.0 191.0 191.0 191.0
Phyllobacterium myrsinacearum (SP33) 269.0 1706.0 2557.0 5413.0 18514.0 1.0 1.0 1.0 28.0 559.0 1.0 3.00 6.0 14.00 107.0 18.0 18.0 18.0 18.0 18.0
Salmonella enterica (SP174) 1.0 2.0 32.0 89.0 181.0 1.0 1.0 1.0 1.0 7.0 1.0 1.00 1.0 2.00 73.0 867.0 867.0 867.0 867.0 867.0
Limosilactobacillus fermentum (SP16) 1.0 1.0 30.0 222.0 377.0 1.0 1.0 1.0 1.0 8.0 1.0 1.00 1.0 3.00 78.0 5612.0 5612.0 5612.0 5612.0 5612.0
Lactobacillus johnsonii (SP15) 1.0 2.0 3.0 5.0 13.0 1.0 37.0 746.0 3204.0 14989.0 1.0 8.00 12.0 399.75 5817.0 5.0 5.0 5.0 5.0 5.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 3.0 77.0 156.0 380.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 2.00 90.0 4255.0 4255.0 4255.0 4255.0 4255.0
Mesorhizobium huakuii (SP10) 5.0 9.0 40.0 302.0 1749.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 9.0 2.0 2.0 2.0 2.0 2.0
Shigella sonnei (SP5) 27.0 40.0 831.0 3849.0 7665.0 1.0 1.0 1.0 1.0 192.0 1.0 2.00 5.5 12.00 1420.0 259.0 259.0 259.0 259.0 259.0
Shigella flexneri (SP157) 1.0 2.0 50.0 316.0 1039.0 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 2.00 593.0 21.0 21.0 21.0 21.0 21.0
Streptococcus multispecies_spp100_3 (SPP100) 4.0 39.0 106.0 154.0 1500.0 1.0 1.0 1.0 4.0 103.0 1.0 1.00 1.0 1.25 67.0 2.0 2.0 2.0 2.0 2.0
Bacillus multispecies_spp110_2 (SPP110) 4.0 6.0 67.0 355.0 881.0 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 3.00 99.0 3751.0 3751.0 3751.0 3751.0 3751.0
Shigella boydii (SP31) 26.0 36.0 685.0 4098.0 4715.0 1.0 1.0 1.0 1.0 162.0 1.0 2.00 4.0 9.00 1330.0 70.0 70.0 70.0 70.0 70.0
Burkholderia multispecies_spp74_3 (SPP74) 114.0 171.0 2989.0 13027.0 54248.0 1.0 1.0 1.0 1.0 1.0 1.0 2.00 6.0 17.50 860.0 41.0 41.0 41.0 41.0 41.0
Staphylococcus multispecies_spp19_2 (SPP19) 1.0 19.0 85.0 403.0 1294.0 1.0 1.0 1.0 14.0 2118.0 1.0 1.00 1.0 2.00 49.0 2.0 2.0 2.0 2.0 2.0
multigenus multispecies_spp78_8 (SPP78) 3.0 6.0 59.0 212.0 769.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 5.0 4.0 4.0 4.0 4.0 4.0
Burkholderia multispecies_spp79_5 (SPP79) 2.0 7.0 60.0 264.0 1108.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 18.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus hominis (SP114) 2.0 6.0 12.0 263.0 840.0 1.0 1.0 1.0 14.0 654.0 1.0 1.00 1.0 2.00 58.0 2.0 2.0 2.0 2.0 2.0
Streptococcus chosunense (SP72) 4.0 9.0 17.0 78.0 4009.0 1.0 1.0 1.0 2.0 81.0 1.0 1.00 1.0 2.00 74.0 3.0 3.0 3.0 3.0 3.0
multigenus multispecies_spp42_2 (SPP42) 2.0 9.0 13.0 104.0 5144.0 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 14.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium mucifaciens (SP73) 3.0 4.0 44.0 200.0 647.0 1.0 1.0 1.0 2.0 354.0 1.0 1.00 1.0 1.00 24.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium pilbarense (SP122) 1.0 2.0 3.0 279.0 507.0 1.0 1.0 1.0 5.0 126.0 1.0 1.00 1.0 2.00 17.0 1.0 1.0 1.0 1.0 1.0
Cutibacterium granulosum (SP32) 1.0 2.0 24.0 83.0 389.0 1.0 1.0 1.0 5.0 188.0 1.0 1.00 1.0 3.00 2169.0 1.0 1.0 1.0 1.0 1.0
Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.537% (SPN738) 1.0 1.0 1.0 1.0 4.0 1.0 1.0 3.0 17.0 420.0 1.0 1.00 1.0 1.00 57.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium tuberculostearicum (SP23) 1.0 3.0 32.0 170.0 756.0 1.0 1.0 1.0 4.0 70.0 1.0 1.00 1.0 2.00 813.0 1.0 1.0 1.0 1.0 1.0
Anaeromassilibacillus senegalensis_nov_93.008% (SPN655) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 11.0 622.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus mitis (SP66) 1.0 2.0 7.0 34.0 176.0 1.0 1.0 1.0 3.0 167.0 1.0 1.00 1.0 2.25 1550.0 2.0 2.0 2.0 2.0 2.0
Streptococcus danieliae_nov_97.379% (SPN1037) 1.0 1.0 11.0 15.0 21.0 1.0 1.0 1.0 1.0 1042.0 1.0 1.00 23.0 3822.50 13906.0 57.0 57.0 57.0 57.0 57.0
Streptococcus sp._MOT-012 (SP2) 8.0 15.0 27.0 67.0 324.0 1.0 1.0 2.0 41.0 33401.0 4.0 35.75 112.5 1778.75 126030.0 75.0 75.0 75.0 75.0 75.0
Pseudomonas aestus (SP94) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 10.0 1686.0 1.0 1.00 1.0 1.00 4.0 1.0 1.0 1.0 1.0 1.0
Cutibacterium acnes (SP13) 59.0 321.0 1515.0 6606.0 44486.0 1.0 1.0 9.0 1218.0 44998.0 1.0 7.75 23.5 56.00 64947.0 106.0 106.0 106.0 106.0 106.0
Stenotrophomonas maltophilia (SP100) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 3266.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Streptococcus danieliae_nov_96.787% (SPN561) 1.0 2.0 2.0 8.0 12.0 1.0 1.0 1.0 1.0 419.0 1.0 2.00 31.5 943.50 6610.0 3.0 3.0 3.0 3.0 3.0
Mammaliicoccus sciuri (SP7) 2.0 5.0 6.0 8.0 10.0 1.0 1.0 1.0 1.0 220.0 1.0 5.00 9.5 75.00 8356.0 6.0 6.0 6.0 6.0 6.0
Akkermansia muciniphila (SP50) 3.0 9.0 10.0 11.0 14.0 1.0 1.0 4.0 16.0 3761.0 3.0 11.75 27.5 324.00 13432.0 5.0 5.0 5.0 5.0 5.0
Enterococcus camelliae (SP4) 1.0 1.0 2.0 5.0 8.0 1.0 1.0 1.0 1.0 1679.0 1.0 6.00 11.5 20.00 4239.0 4.0 4.0 4.0 4.0 4.0
Duncaniella freteri_nov_88.577% (SPN1181) 2.0 2.0 3.0 4.0 421.0 1.0 1.0 1.0 5.0 881.0 1.0 5.00 9.0 253.00 3731.0 2.0 2.0 2.0 2.0 2.0
Duncaniella freteri_nov_91.952% (SPN677) 3.0 5.0 8.0 9.0 537.0 1.0 1.0 2.0 60.0 1407.0 2.0 11.00 43.0 1090.75 6238.0 5.0 5.0 5.0 5.0 5.0
Actinomyces polynesiensis_nov_97.183% (SPN1063) 1.0 1.0 2.0 3.0 5.0 1.0 1.0 1.0 1.0 636.0 1.0 4.00 8.0 15.00 4200.0 4.0 4.0 4.0 4.0 4.0
Faecalibaculum rodentium (SP12) 1.0 3.0 3.0 5.0 7.0 1.0 1.0 1.0 5.0 179.0 1.0 6.00 9.0 75.75 5504.0 2.0 2.0 2.0 2.0 2.0
Murimonas sp._strain_[WYJ26-X68]_nov_94.105% (SPN914) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 16.0 365.0 1.0 1.00 1.0 1.00 37.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_89.780% (SPN1292) 1.0 2.0 3.0 4.0 4.0 1.0 1.0 1.0 13.0 1160.0 1.0 4.00 21.5 479.75 2335.0 2.0 2.0 2.0 2.0 2.0
Prevotella shahii_nov_87.903% (SPN81) 4.0 6.0 9.0 11.0 17.0 1.0 1.0 3.0 67.0 4622.0 3.0 14.75 30.0 1380.75 13238.0 10.0 10.0 10.0 10.0 10.0
Eubacteriales_[G-1] bacterium_MOT-159 (SP139) 1.0 2.0 3.0 3.0 6.0 1.0 1.0 1.0 2.0 68.0 1.0 3.00 7.5 56.25 4691.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_86.373% (SPN1521) 1.0 1.0 2.0 3.0 110.0 1.0 1.0 1.0 7.0 317.0 1.0 3.00 8.5 389.50 1678.0 3.0 3.0 3.0 3.0 3.0
Streptococcus danieliae_nov_95.582% (SPN150) 1.0 2.0 3.0 5.0 7.0 1.0 1.0 1.0 1.0 297.0 1.0 2.00 7.0 667.00 2833.0 2.0 2.0 2.0 2.0 2.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.870% (SPN318) 2.0 3.0 3.0 9.0 12.0 1.0 1.0 2.0 46.0 3819.0 1.0 8.00 16.0 788.00 6310.0 7.0 7.0 7.0 7.0 7.0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.703% (SPN798) 1.0 3.0 3.0 4.0 10.0 1.0 1.0 3.0 34.0 4081.0 1.0 6.00 20.5 534.00 7330.0 8.0 8.0 8.0 8.0 8.0
Achromobacter multispecies_spp65_2 (SPP65) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 4241.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Download table as TSV