taxon lfc: Patient_PI vs. Healthy_Control se: Patient_PI vs. Healthy_Control W: Patient_PI vs. Healthy_Control p: Patient_PI vs. Healthy_Control q: Patient_PI vs. Healthy_Control diff: Patient_PI vs. Healthy_Control Massilia aurea (SP1) -0.725864971820025 0.386811152963797 -1.87653578822211 0.0605817452216688 1 FALSE Atopobium sp._oral_taxon_199 (SP10) 1.03182544879386 0.454970349086527 2.26789603073151 0.0233355443383438 1 FALSE Carnobacterium divergens (SP100) -0.146984064944428 0.287311669420177 -0.511584041264514 0.60894215682089 1 FALSE Streptococcus parasanguinis_II (SP103) 0.0194809468601188 0.136348014883266 0.142876644568661 0.886387604243332 1 FALSE Sphingomonas echinoides (SP104) -0.627599378409617 0.261024962410605 -2.40436536265973 0.0162005726265548 1 FALSE Parvimonas sp._oral_taxon_110 (SP105) -0.114044086134871 0.276957307611468 -0.411774966757182 0.68050437137187 1 FALSE Neisseria flavescens|subflava (SP106) 0.186840219358656 0.27549405950586 0.678200537949099 0.497644551522747 1 FALSE Propionibacterium acnes (SP112) -0.0476150748346802 0.55544301615702 -0.0857244999930286 0.931685425638194 1 FALSE Rothia aeria (SP114) 0.433272653341035 0.262655426199016 1.6495857695045 0.0990276875252997 1 FALSE Streptococcus sp._oral_taxon_423 (SP115) 0.162738541186244 0.240252560691997 0.677364439810798 0.498174754588979 1 FALSE Parvimonas micra (SP12) 0.80611905694945 0.655029203440534 1.23066124794943 0.21844958746769 1 FALSE Actinomyces naeslundii (SP126) 0.0993269983653566 0.165470100715363 0.600271577378296 0.54832525771954 1 FALSE Porphyromonas endodontalis (SP127) 0.293252345440064 0.361885560052874 0.810345528562172 0.417741615211244 1 FALSE Actinomyces sp._oral_taxon_525 (SP129) 0.140976577086909 0.232920198124417 0.605256985963944 0.545008257051175 1 FALSE Pseudomonas sp._Oral_Taxon_C61 (SP13) 1.0916665940437 0.747073336374585 1.46125760469697 0.143944759765543 1 FALSE Desulfobulbus sp._oral_taxon_041 (SP136) 0.0724828944245213 0.15832662869131 0.457806087476552 0.64709176192948 1 FALSE Actinomyces sp._oral_taxon_897 (SP14) 0.158715621010243 0.165964870591465 0.956320578232089 0.338910296456801 1 FALSE Peptostreptococcaceae_[XI][G-3] sp._oral_taxon_495 (SP141) 0.313315501994887 0.230918870031919 1.35682069616735 0.174838189788318 1 FALSE Actinomyces sp._oral_taxon_175 (SP142) -0.00896071781311752 0.0717795918857567 -0.124836566741411 0.900652937746931 1 FALSE Bifidobacterium dentium (SP147) 0.135496274475425 0.123090974652776 1.10078155492426 0.270991741379285 1 FALSE Gemella morbillorum (SP148) 0.0849329252142186 0.192760267546851 0.440614273341238 0.65949226785914 1 FALSE Actinomyces israelii (SP149) -0.0739491668700181 0.121055831370413 -0.610868274851994 0.541286789175444 1 FALSE Abiotrophia defectiva (SP15) 0.106273405499642 0.291690934038219 0.364335648106628 0.715607383114512 1 FALSE Noviherbaspirillum suwonense (SP153) -0.478827711491803 0.162199796068201 -2.9520857799998 0.00315635234008107 0.505016374412971 FALSE TM7_[G-1] sp._oral_taxon_952 (SP156) 0.232460236672718 0.291943294032983 0.796251331761899 0.425885967087484 1 FALSE Fretibacterium sp._oral_taxon_360 (SP157) -0.0120257431653333 0.140106299012964 -0.0858329943054203 0.931599177592124 1 FALSE Psychrobacter arcticum (SP16) -1.73108019813254 0.531801450394316 -3.25512500360612 0.0011334246662521 0.182481371266588 FALSE Slackia exigua (SP165) -0.209484683018279 0.0977693907867954 -2.1426407726637 0.0321419545585961 1 FALSE Psychrobacter cibarius (SP17) -0.603713255491242 0.488757517511287 -1.23519993833609 0.216756102224607 1 FALSE Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_103 (SP170) 0.0506705705607468 0.109527670419828 0.462628031496721 0.643631012432404 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP173) 0.0678085978805862 0.294071963451319 0.230585048247251 0.817637184391666 1 FALSE Paracoccus marcusii_Oral_Taxon_D41 (SP174) -0.0404674078385695 0.0529987596333266 -0.763553866515828 0.445133150294927 1 FALSE Pseudomonas sp._Oral_Taxon_C85 (SP18) 0.151444333521698 0.511972343588671 0.295805692276557 0.767378475634486 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP183) 0.0787951689091591 0.181208802271073 0.43483080248656 0.663685244960225 1 FALSE Selenomonas sputigena (SP184) -0.062279731702344 0.0680089445010194 -0.915757951535485 0.359793862192853 1 FALSE Actinomyces oris (SP189) 0.032688860908435 0.106483649186977 0.306984792106777 0.758854947839397 1 FALSE Prevotella oris (SP191) -0.0438494995156093 0.087622904283497 -0.50043421721948 0.616769364994659 1 FALSE Pseudomonas fluorescens (SP2) 0.181384402303592 0.692802122504777 0.261812711612097 0.793465838371122 1 FALSE Rothia dentocariosa (SP20) 0.220313664108953 0.365212768775999 0.603247429840222 0.546344099364053 1 FALSE Treponema denticola (SP203) 0.258589465434617 0.186146118620924 1.38917462985742 0.164779654371953 1 FALSE Mogibacterium diversum (SP205) 0.227020394442542 0.293024556832612 0.774748699892158 0.438488167967239 1 FALSE Methylobacterium rhodesianum (SP206) 0.0345975502682121 0.275627256585718 0.125522964226336 0.900109545991219 1 FALSE Pseudomonas sp._Oral_Taxon_B99 (SP21) 0.62814497889016 0.555477773566623 1.13081928527393 0.258131161131866 1 FALSE Clostridiales_[G] sp._Oral_Taxon_G74 (SP215) 0.309781642078505 0.285322986231735 1.08572269682789 0.277601695957668 1 FALSE Psychrobacter okhotskensis (SP216) -0.16733534953187 0.185911319413868 -0.900081555332061 0.368076850944529 1 FALSE Porphyromonas gingivalis (SP217) -0.0298962432982662 0.202637522554815 -0.147535574464887 0.882709302581685 1 FALSE Psychrobacter glacincola (SP22) -0.178295059317651 0.0837491856643326 -2.12891693099272 0.0332611337290126 1 FALSE Psychrobacter urativorans (SP23) -0.371000268544103 0.350058869029062 -1.05982250806307 0.289225354975214 1 FALSE Pseudomonas koreensis (SP230) 0.245064485061477 0.242399841988571 1.0109927591167 0.312019895424011 1 FALSE Fusobacterium periodonticum (SP232) 0.157551264068178 0.221290386525847 0.711966147927422 0.476485738810365 1 FALSE Gemella haemolysans (SP235) -0.093469355402972 0.087065355068243 -1.07355394496134 0.283022648580828 1 FALSE Mogibacterium timidum (SP25) 1.25684722759951 0.77012482807545 1.63200455533993 0.102678526559141 1 FALSE Filifactor alocis (SP257) 0.145639163171526 0.153571093060785 0.94835011113635 0.342951247999001 1 FALSE Psychrobacter pulmonis (SP26) 0.303637556474622 0.39207255526509 0.774442261762814 0.438669299857155 1 FALSE Streptococcus tigurinus (SP262) 0.0724828944245213 0.094389642265892 0.76791152805029 0.442539748089867 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_150 (SP268) 0.0225459722123346 0.0670213708407325 0.336399747267362 0.736569440040706 1 FALSE Pseudomonas viridiflava (SP27) -0.0197570843442301 0.499776887163692 -0.0395318087964301 0.968466393578214 1 FALSE Fusobacterium sp._HOT_204 (SP279) -0.0404674078385695 0.0529987596333266 -0.763553866515828 0.445133150294927 1 FALSE Olsenella uli (SP28) 1.49672770732768 0.54825058073392 2.73000660632967 0.00633330563773969 1 FALSE Actinomyces georgiae (SP293) 0.0637470283994642 0.135721176534873 0.469691097785941 0.638575728970861 1 FALSE Actinomyces sp._oral_taxon_170 (SP294) -0.0206301529807916 0.114690156437808 -0.179877276494767 0.85724891494116 1 FALSE Sphingomonas aerolata (SP295) -0.0937864217277961 0.0713005031835609 -1.31536830092694 0.188386153600392 1 FALSE Burkholderia cepacia (SP3) -0.797901203019045 0.949086662541082 -0.840704262857037 0.400513631863338 1 FALSE Streptococcus constellatus (SP318) 0.0225459722123346 0.0670213708407325 0.336399747267362 0.736569440040706 1 FALSE Actinomyces sp._oral_taxon_180 (SP32) 0.231304674382518 0.359378986027967 0.643623259498312 0.519819763698218 1 FALSE Acinetobacter baumannii (SP324) -0.0341551333539317 0.141491302294472 -0.241393872273845 0.809249861570873 1 FALSE Treponema sp._oral_taxon_237 (SP326) -0.093469355402972 0.087065355068243 -1.07355394496134 0.283022648580828 1 FALSE Actinomyces dentalis (SP328) -0.00896071781311748 0.0717795918857567 -0.124836566741411 0.900652937746931 1 FALSE Anaerolineae_[G-1] sp._oral_taxon_439 (SP33) 0.144058956964352 0.476970170238714 0.302029279718381 0.762629742634648 1 FALSE Lachnospiraceae_[G-7] sp._oral_taxon_086 (SP354) 0.0724828944245213 0.113476079786901 0.63875042705598 0.522985302121629 1 FALSE Actinomyces sp._oral_taxon_169 (SP37) -0.334427572428084 0.21714374142812 -1.54012070635151 0.123530933372543 1 FALSE Pseudomonas fragi (SP38) 0.385572479426146 0.527835400118344 0.730478629019005 0.465097671422985 1 FALSE Acidovorax defluvii (SP382) -0.0404674078385695 0.0529987596333266 -0.763553866515828 0.445133150294927 1 FALSE Acinetobacter lwoffii (SP4) -0.779033122892868 0.684497300811872 -1.13810985371143 0.255074614059174 1 FALSE Corynebacterium sp._Oral_Taxon_A16 (SP401) -0.0089607178131175 0.0717795918857567 -0.124836566741411 0.900652937746931 1 FALSE TM7_[G-1] sp._oral_taxon_349 (SP41) 1.10376605975895 0.599277929645247 1.84182664696552 0.0655005109746586 1 FALSE Peptoniphilaceae_[G-1] sp._oral_taxon_113 (SP42) 0.314449127138494 0.497376866328888 0.632215023307026 0.527246381771521 1 FALSE Pseudomonas tolaasii (SP43) 0.534445634290789 0.396161181270938 1.34906108815663 0.177317345394398 1 FALSE Veillonellaceae_[G-1] sp._oral_taxon_132 (SP45) -0.0525853655406666 0.132102125703314 -0.39806600583224 0.69058153162121 1 FALSE TM7_[G-1] sp._oral_taxon_346 (SP46) 0.647624922410355 0.704146371081637 0.919730540420936 0.357713588875851 1 FALSE TM7_[G-5] sp._oral_taxon_356 (SP47) 0.945000934555837 0.52372920579477 1.80436936512215 0.0711734222507835 1 FALSE Lautropia mirabilis (SP49) 0.103782124349289 0.271216357686735 0.382654369502155 0.701976051765294 1 FALSE Massilia brevitalea (SP5) 0.0702097351961151 0.33654274786282 0.208620556057068 0.834744462238584 1 FALSE Granulicatella adiacens (SP51) 0.455683646631155 0.340546369237711 1.3380957420018 0.180865228626667 1 FALSE Brevundimonas diminuta (SP54) -1.29825951605301 0.378675642005818 -3.42842098101747 0.000607103240401736 0.0983507249450812 FALSE Psychrobacter sp._cryopeg55 (SP56) -1.04805887476955 0.483789502923589 -2.1663530697463 0.0302842172418214 1 FALSE Propionibacterium sp._oral_taxon_194 (SP58) 0.163620872823837 0.174339178349404 0.938520385222387 0.347977045872721 1 FALSE Fusobacterium nucleatum_subsp._polymorphum (SP59) -0.0332783349753061 0.303568492526618 -0.109623810752982 0.912707726214262 1 FALSE Pseudomonas antarctica (SP6) 0.555243957629937 0.579138333552697 0.958741505201045 0.337688983723727 1 FALSE Propionibacterium propionicum (SP60) 1.13382564511547 0.552237835769009 2.053147342823 0.0400582895803803 1 FALSE Olsenella sp._oral_taxon_807 (SP61) 1.06220598724896 0.514109484134429 2.0661085236296 0.038818233596137 1 FALSE Fretibacterium fastidiosum (SP63) -0.0308336276463607 0.279222943012237 -0.110426554901721 0.912071094141879 1 FALSE Actinomyces oricola (SP64) 0.446055575499288 0.419657864847378 1.06290293322993 0.287825972691094 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP7) 0.192300642498249 0.544516612426856 0.353158449365179 0.723969655996104 1 FALSE Solobacterium moorei (SP72) 0.422883712580937 0.280239927051712 1.50900593298721 0.131297266607467 1 FALSE Streptococcus infantis (SP73) 0.180079422339595 0.220311290568739 0.817386262296023 0.413707723922487 1 FALSE Rothia mucilaginosa (SP74) 0.238003697730836 0.406574035853674 0.585388334577502 0.558286630773694 1 FALSE Bacteroidales_[G-2] sp._oral_taxon_274 (SP76) 0.0656072587421477 0.522664741022601 0.125524554447247 0.900108287135078 1 FALSE Treponema socranskii (SP77) 0.0427002933949366 0.140147982961293 0.304680042428652 0.760609851189161 1 FALSE Atopobium parvulum (SP78) 0.143780231631041 0.220354709762054 0.652494479406857 0.514082233061513 1 FALSE Actinomyces timonensis (SP79) 0.156102658091301 0.370295214714925 0.421562720467445 0.673344221812592 1 FALSE Atopobium rimae (SP8) 0.813666356906183 0.531559343709972 1.53071593329029 0.125839614162369 1 FALSE Streptococcus mitis (SP80) 0.0748401063187215 0.244714150844129 0.305826639205638 0.759736644481646 1 FALSE Tannerella forsythia (SP82) -0.160034333924326 0.457868100248546 -0.349520601757262 0.726698506946059 1 FALSE Rhizobium rhizogenes_Oral_Taxon_D34 (SP84) 0.173530569294769 0.400277553124738 0.433525607269542 0.66463296688707 1 FALSE Peptostreptococcaceae_[XI][G-4] sp._oral_taxon_369 (SP85) 0.17740206641419 0.199784805705914 0.887965757893162 0.374559170775535 1 FALSE Actinomyces odontolyticus (SP86) 0.26655261276658 0.318199039876283 0.837691442658712 0.402204020729069 1 FALSE Pseudomonas cedrina (SP87) 0.357898649859056 0.208964133771493 1.71272765043223 0.0867626557684636 1 FALSE Pseudomonas psychrophila (SP9) 0.330491614516874 0.563571334076605 0.586423748926788 0.557590788764558 1 FALSE Streptococcus australis (SP90) 0.381682656393808 0.228258619804825 1.67215002316307 0.0944947425916011 1 FALSE Corynebacterium durum (SP91) 0.0957022409593392 0.118648990685777 0.806599705620686 0.419897143405886 1 FALSE Oribacterium sp._oral_taxon_078 (SP93) 0.190222311035695 0.160295589496593 1.18669709898499 0.2353471197434 1 FALSE Acinetobacter baumannii_nov_94.251% (SPN104) -0.0553333245680583 0.235778530974467 -0.234683473255037 0.81445441596915 1 FALSE Acinetobacter baumannii_nov_95.112% (SPN110) -0.137353294054114 0.298861742805148 -0.459588078303035 0.645811917901823 1 FALSE Acinetobacter sp._oral_taxon_408_nov_96.509% (SPN115) 0.226061281961344 0.197725404282348 1.1433092413281 0.252910219434267 1 FALSE Rhodocyclus sp._oral_taxon_028_nov_82.520% (SPN127) -0.112362832943652 0.237902289733579 -0.47230664769761 0.636707926065559 1 FALSE Neisseria elongata_nov_82.897% (SPN129) 0.183498668759485 0.220628176358602 0.831710037167837 0.405572633789614 1 FALSE Neisseria weaveri_nov_86.762% (SPN130) 0.0606820030472484 0.183863657943345 0.330038049530956 0.741371212022125 1 FALSE Kingella denitrificans_nov_83.333% (SPN131) 0.11982170691671 0.181991402991366 0.658392127030281 0.510286193045376 1 FALSE Acinetobacter baumannii_nov_94.888% (SPN133) 0.511341688839186 0.502725079121168 1.0171398047877 0.309086926872738 1 FALSE Lautropia mirabilis_nov_84.394% (SPN134) -0.0206301529807916 0.114690156437808 -0.179877276494767 0.85724891494116 1 FALSE Variovorax paradoxus_nov_87.984% (SPN136) 0.0310308582272628 0.191483078247413 0.162055355028125 0.871262262915408 1 FALSE Neisseria weaveri_nov_89.002% (SPN142) -0.369441724685958 0.165170873906687 -2.23672440514345 0.0253043579136714 1 FALSE Lautropia mirabilis_nov_85.072% (SPN143) -0.0619626653775201 0.115266058301978 -0.537562108831622 0.590879395426148 1 FALSE Rhodocyclus sp._oral_taxon_028_nov_83.537% (SPN144) 0.240873750873697 0.380980120106866 0.632247558760104 0.527225124887361 1 FALSE Neisseria weaveri_nov_86.815% (SPN145) 0.0375941127220295 0.151660712850143 0.247883001573233 0.804224932308064 1 FALSE Variovorax paradoxus_nov_86.094% (SPN147) -0.030773041676892 0.102645863205495 -0.299798167367786 0.764331113295432 1 FALSE Parvimonas micra_nov_94.990% (SPN15) 0.142503123558483 0.152706429442077 0.933183521343057 0.350725221415968 1 FALSE Cupriavidus gilardii_nov_84.568% (SPN151) -0.0641260438179392 0.171416357393066 -0.374095242678009 0.708333457961674 1 FALSE Acinetobacter sp._oral_taxon_408_nov_92.480% (SPN152) -0.124976045428424 0.0747517223062423 -1.67188181854089 0.094547628675381 1 FALSE Pseudomonas fluorescens_nov_96.495% (SPN153) 0.298994166535726 0.438861815010824 0.681294558580704 0.495685125688748 1 FALSE Pseudomonas fluorescens_nov_97.320% (SPN155) 0.0152088179448571 0.158799433411682 0.0957737544656648 0.923700262419812 1 FALSE Rhodocyclus sp._oral_taxon_028_nov_82.759% (SPN164) 0.908199276592261 0.41735402618226 2.17608845157192 0.0295486472791721 1 FALSE Thauera chlorobenzoica_nov_84.948% (SPN170) 0.0724828944245213 0.113476079786901 0.63875042705598 0.522985302121629 1 FALSE Sphingomonas echinoides_nov_95.642% (SPN174) -0.255265003585619 0.36428416075159 -0.700730449160779 0.483471249843133 1 FALSE Neisseria oralis_nov_89.837% (SPN179) 0.0826257831206218 0.1239969582955 0.666353306213482 0.505185300747667 1 FALSE Variovorax paradoxus_nov_86.680% (SPN184) 0.260896607528214 0.312652650518937 0.834461524938875 0.404020959764122 1 FALSE Acinetobacter baumannii_nov_93.996% (SPN185) -0.00896071781311749 0.0717795918857567 -0.124836566741411 0.900652937746931 1 FALSE Variovorax paradoxus_nov_87.295% (SPN189) -0.00896071781311752 0.0717795918857567 -0.124836566741411 0.900652937746931 1 FALSE Kingella denitrificans_nov_87.064% (SPN190) -0.0937864217277961 0.0713005031835609 -1.31536830092694 0.188386153600393 1 FALSE Pseudomonas stutzeri_nov_94.057% (SPN191) 0.163084910404 0.330317759929204 0.493721289581744 0.621503027669295 1 FALSE Burkholderia cepacia_nov_95.688% (SPN193) 0.19935191002801 0.39571013302993 0.503782676732546 0.614414102356397 1 FALSE Leptothrix sp._oral_taxon_025_nov_87.984% (SPN195) -0.0404674078385695 0.0529987596333266 -0.763553866515828 0.445133150294927 1 FALSE Leptothrix sp._oral_taxon_025_nov_86.100% (SPN202) 0.0509752087928273 0.283566160941557 0.179764780901813 0.857337233908728 1 FALSE Cupriavidus gilardii_nov_82.992% (SPN213) 0.208961295266102 0.307864745037769 0.678743827067522 0.497300191387621 1 FALSE Nitrosomonas sp._Is79A3_nov_83.367% (SPN224) 0.353598253303947 0.246561794524565 1.43411615731373 0.151539117820022 1 FALSE Acinetobacter baumannii_nov_93.661% (SPN233) 0.0958112485910038 0.288918345336545 0.331620508484495 0.74017583159297 1 FALSE Kingella kingae_nov_83.198% (SPN237) 0.00946951437361728 0.0758718299009087 0.124809357913007 0.900674478782684 1 FALSE Eikenella sp._oral_taxon_011_nov_82.696% (SPN24) -0.0210786755152144 0.136977907424682 -0.153883760611576 0.877701388735984 1 FALSE Pseudomonas fluorescens_nov_96.495% (SPN244) 0.21507935187734 0.296153482921339 0.726242858114442 0.467689902574411 1 FALSE Pseudomonas sp._oral_taxon_032_nov_86.722% (SPN248) -0.0089607178131175 0.0717795918857567 -0.124836566741411 0.900652937746931 1 FALSE Acinetobacter sp._oral_taxon_408_nov_93.429% (SPN262) 0.305276460988002 0.626866918543136 0.486987671478145 0.626267067734995 1 FALSE Rhodocyclus sp._oral_taxon_028_nov_84.286% (SPN263) 0.256522993885673 0.281654552557969 0.91077169375019 0.362415679858891 1 FALSE Acinetobacter baumannii_nov_94.694% (SPN3) -0.340682993687898 0.270215012519914 -1.26078484874259 0.207386374058245 1 FALSE Burkholderia cepacia_nov_91.020% (SPN33) 0.085682494191686 0.307992174554828 0.2781969844381 0.780861149600843 1 FALSE Acinetobacter baumannii_nov_93.047% (SPN42) 0.0901404079181623 0.248733311048494 0.362397812895226 0.717054773644635 1 FALSE Rhodocyclus sp._oral_taxon_028_nov_83.265% (SPN72) 0.364659446878117 0.267136417460319 1.36506826865822 0.17223159410506 1 FALSE Ottowia sp._oral_taxon_894_nov_84.568% (SPN91) -0.169849544366046 0.499621810714534 -0.339956224335233 0.733889494502403 1 FALSE Sphingomonas sp._oral_taxon_004_nov_95.862% (SPN92) -0.06196266537752 0.115266058301978 -0.537562108831621 0.590879395426149 1 FALSE Variovorax paradoxus_nov_85.481% (SPN98) 0.0409762043990693 0.0862961694075003 0.474832251308572 0.634906543400223 1 FALSE Fusobacterium naviforme_nucleatum_subsp._vincentii (SPP16) -0.108709191682109 0.166412402119047 -0.653251742645604 0.513593997539495 1 FALSE Psychrobacter cibarius_urativorans (SPP3) 0.0409762043990693 0.117293105506131 0.349348789276684 0.726827474389482 1 FALSE