Taxon IM1 IM10 IM11 IM12 IM13 IM14 IM15 IM16 IM17 IM18 IM19 IM2 IM20 IM21 IM22 IM3 IM38 IM39 IM4 IM40 IM41 IM42 IM43 IM44 IM45 IM46 IM47 IM48 IM49 IM5 IM50 IM51 IM52 IM6 IM7 IM8 IM9 Massilia aurea (SP1) 19595 1980 5077 1477 6121 3506 5915 25182 5740 1970 1999 112 7523 6511 1914 9675 5529 5786 4811 7302 59224 9520 9271 6956 8236 2513 10465 13098 14480 18689 1973 19342 12754 9971 3882 14387 21913 Atopobium sp._oral_taxon_199 (SP10) 1 6 0 2 7 2 0 0 0 12 0 606 2 0 0 11 4 26 0 0 7 0 0 0 7 5 0 1 1 5 499 5 0 6 4 35 0 Sphingomonas echinoides (SP104) 3 0 0 1 0 0 0 0 0 1 1 0 0 0 0 2 0 19 0 3 0 2 1 113 5 1 38 4 12 1 2 4 5 0 0 0 0 Propionibacterium acnes (SP112) 0 0 0 0 0 2 0 0 0 0 15 0 1 106 235 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 4 26 0 0 1 0 2 Parvimonas micra (SP12) 12 63 65 318 135 2 21 1 13 5 18 3 0 0 1 70 13 5 12 1 1 2 14 5 9 7 1 0 13 55 499 66 0 0 14 5 11 Porphyromonas endodontalis (SP127) 2 12 0 2 0 0 0 0 0 0 3 4 0 0 0 17 0 0 23 0 0 0 0 0 0 0 1 0 1 7 2 4 0 0 0 0 0 Pseudomonas sp._Oral_Taxon_C61 (SP13) 0 613 235 798 31 25 0 27 9 17 1 2 252 4 0 16 193 2 40 15 3 113 4 672 26 5 36 0 8 2 11 2 2 133 23 0 64 Abiotrophia defectiva (SP15) 1 0 70 0 2 0 0 0 0 4 1 2 0 0 0 3 0 1 0 296 0 0 12 0 89 0 1 2 0 0 0 0 0 0 0 0 0 TM7_[G-1] sp._oral_taxon_952 (SP156) 6 4 0 0 8 0 0 3 0 0 18 0 0 0 0 0 1 0 0 2 0 0 7 1 8 1 2 0 0 3 0 0 0 0 0 0 0 Psychrobacter arcticum (SP16) 6 1 2 0 5 0 1 0 1 2 2 1 14 3 10 35 0 22 16 23 5 1 5 17 10 3 50 6 26 168 10 65 36 0 3 0 0 Streptococcus sp._oral_taxon_058 (SP160) 1 0 0 0 0 0 0 1 0 0 6 0 0 8 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Psychrobacter cibarius (SP17) 2 0 0 0 7 1 0 0 0 1 1 0 2 0 10 4 131 2 56 2 364 0 384 2 1 12 10 0 11 92 0 55 11 1 0 4 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP173) 0 29 1 0 3 1 1 0 0 0 2 0 0 0 0 1 0 2 0 0 1 0 0 0 2 0 0 0 6 2 17 0 0 0 0 16 0 Streptococcus sanguinis (SP179) 1 0 1 0 0 0 0 0 0 0 4 8 0 6 7 0 0 0 0 1 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp._Oral_Taxon_C85 (SP18) 0 0 7 2 0 0 0 1 1 0 1 0 1 16 0 0 0 1 0 1 0 1 2 0 14 0 1 0 4 0 1 0 0 1 0 0 1304 Pseudomonas fluorescens (SP2) 342 202 6706 291 563 624 3137 22339 4584 172 87 25 448 36 13 452 4735 777 1015 1135 4 2725 1569 1696 1285 875 1179 174 3999 15 250 185 122 3269 477 23 814 Rothia dentocariosa (SP20) 1 6 1 100 0 0 0 0 0 14 1 1 0 2 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 16 0 0 4 0 0 0 Mogibacterium diversum (SP205) 0 25 0 0 2 2 0 4 0 2 0 0 0 0 0 2 3 6 1 7 0 0 18 0 0 1 0 0 1 13 0 0 0 0 0 0 1 Methylobacterium rhodesianum (SP206) 0 0 0 0 0 0 0 0 0 0 0 0 0 4 44 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 5 0 0 0 0 0 Pseudomonas sp._Oral_Taxon_B99 (SP21) 21 1 159 3 12 8 0 9 87 8 1 2 13 0 0 13 372 109 25 169 0 361 6 59 33 0 50 3 70 0 5 0 0 132 13 2 107 Haemophilus parainfluenzae (SP213) 0 0 0 0 0 0 0 0 0 0 1 0 0 121 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Psychrobacter urativorans (SP23) 0 0 0 0 2 0 0 0 0 0 0 0 2 0 1 5 2 0 3 6 3 0 15 0 0 3 5 1 4 56 0 28 4 0 0 0 0 Mogibacterium timidum (SP25) 0 30 67 534 20 3 124 4 0 11 40 2265 1 7 0 68 1 161 157 0 6 1 0 2 17 12 1 2 19 36 85 40 0 6 17 451 5 Psychrobacter pulmonis (SP26) 0 0 0 0 0 0 0 0 12 0 0 0 1 0 0 7 0 1 258 3 24 1 0 4 0 1 4 0 21 3 0 1 0 0 2 0 0 Pseudomonas viridiflava (SP27) 1 7 18 5 81 9 0 3 6 2 0 0 19 2 0 16 48 6 73 10 1 5 1 81 60 1 40 2 50 0 0 1 6 62 18 0 37 Olsenella uli (SP28) 0 70 8 8 10 5 14 4 1 1 0 8 0 0 0 508 0 68 5 0 0 1 1 0 1 1 2 0 36 17 96 0 4 2 8 406 0 Burkholderia cepacia (SP3) 1 0 0 2 0 0 2 0 0 0 1158 3 6 7234 5423 4 0 2 1 5 0 2 2 3 1 11 25 6 20 3 82 318 26 0 0 0 0 Actinomyces sp._oral_taxon_180 (SP32) 3 2 12 0 8 0 0 0 0 5 0 28 1 1 0 0 0 1 1 4 0 0 5 1 256 2 7 0 3 19 23 4 1 0 0 0 0 Anaerolineae_[G-1] sp._oral_taxon_439 (SP33) 0 2 0 17 7 0 1 2 0 0 1 1 0 0 0 1 0 5 128 0 1 3 0 0 3 2 0 0 0 0 0 0 0 1 0 95 1 Pseudomonas fragi (SP38) 0 1 23 0 3 4 12 201 32 1 1 0 2 0 0 1 42 0 5 2 0 8 14 2 2 0 0 0 19 0 0 0 0 32 5 0 3 Acinetobacter lwoffii (SP4) 4882 248 30 29 2384 673 18 3703 1307 1223 113 26 1559 176 206 5326 8 1940 2866 1514 235 3436 529 784 1269 461 2632 2014 1754 6914 641 2484 636 882 712 11183 27 TM7_[G-1] sp._oral_taxon_349 (SP41) 4 79 18 0 68 15 0 2 0 0 171 5 1 0 0 106 53 92 9 4 0 0 1 0 5 1 4 0 184 2 0 4 0 1 3 154 0 Peptoniphilaceae_[G-1] sp._oral_taxon_113 (SP42) 0 1 0 350 0 0 0 0 0 9 0 135 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 1 0 Pseudomonas tolaasii (SP43) 0 1 12 2 7 0 0 2 1 2 0 0 15 0 0 7 17 6 42 10 0 3 0 40 24 0 13 0 27 0 3 3 0 16 11 0 28 TM7_[G-1] sp._oral_taxon_346 (SP46) 3 11 0 0 56 56 0 1 0 1 226 883 1 0 0 79 0 15 38 1 2 2 0 0 3 4 2 1 9 3 1 27 0 0 4 83 1 TM7_[G-5] sp._oral_taxon_356 (SP47) 0 101 177 0 4 56 0 0 0 0 22 18 3 0 0 21 0 8 15 1 11 0 0 0 19 0 1 0 1397 1 1 1 0 0 2 22 0 Massilia brevitalea (SP5) 0 31 2 0 5 0 0 0 1 1 0 0 0 0 0 1 0 2 4 1 0 1 0 4 2 1 5 1 2 0 2 1 0 33 1 0 1 Granulicatella adiacens (SP51) 57 0 2 0 0 0 0 0 0 14 2 0 0 18 0 0 1 0 0 3 0 0 1 0 57 0 11 0 0 5 0 0 0 2 0 0 0 Brevundimonas diminuta (SP54) 1 0 0 0 2 0 0 0 0 2 1 0 2 0 1 2 0 14 1 5 2 6 2 7 8 2 11 2 57 7 1 1 6 0 0 0 1 Psychrobacter sp._cryopeg55 (SP56) 6 0 0 0 5 0 0 0 0 2 0 0 3 0 18 15 0 10 2 14 0 1 3 3 2 3 14 0 10 22 2 19 2 0 2 0 1 Fusobacterium nucleatum_subsp._polymorphum (SP59) 0 0 0 0 0 0 0 0 0 2 63 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 Pseudomonas antarctica (SP6) 0 2 58 4 1 6 28 294 54 0 0 0 2 0 0 0 52 1 11 6 0 19 17 4 0 0 9 0 15 0 0 3 0 39 6 0 5 Propionibacterium propionicum (SP60) 11 22 0 4 20 8 0 99 33 0 254 0 0 6 0 31 10 88 13 0 0 8 11 0 0 11 0 1 0 2 0 4 0 4 0 0 67 Olsenella sp._oral_taxon_807 (SP61) 1 45 13 0 26 18 0 7 0 0 9 1 1 0 0 165 3 137 21 2 5 0 0 0 1 0 5 1 31 4 19 1 1 0 6 58 0 Actinomyces oricola (SP64) 0 0 1 0 3 0 11 0 0 0 0 0 0 0 0 13 0 6 6 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 7 166 3 Propionibacterium acidifaciens (SP69) 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 0 0 0 0 0 1 29 0 0 1 0 0 0 39 65 0 0 0 0 2 0 0 Fusobacterium nucleatum_subsp._vincentii (SP7) 13 1 1 38 0 0 0 0 0 1 251 2 0 8 0 0 0 0 0 0 19 0 0 2 1 0 0 0 0 0 40 1 0 0 0 0 47 Actinomyces meyeri (SP70) 1 1 0 0 1 0 3 0 0 2 0 104 0 0 0 71 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Solobacterium moorei (SP72) 0 40 4 1 3 1 0 0 2 1 1 5 0 0 0 2 2 1 0 3 2 1 1 0 0 1 0 0 0 9 56 0 0 0 0 0 0 Rothia mucilaginosa (SP74) 0 1 1 2 0 0 0 0 1 70 1 1 0 161 0 0 0 0 1 4 0 1 0 3 10 1 21 0 0 0 4 3 0 0 0 0 1 Bacteroidales_[G-2] sp._oral_taxon_274 (SP76) 0 0 20 1 5 2 0 0 0 0 16 0 0 0 0 315 1 5 5 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 9 0 Atopobium parvulum (SP78) 0 3 0 0 3 1 0 0 0 6 0 6 3 0 0 0 2 0 0 10 2 0 9 0 2 1 0 0 24 1 0 0 0 2 0 0 1 Actinomyces timonensis (SP79) 1 152 0 0 1 0 0 0 0 1 0 1 1 2 0 14 0 21 0 1 0 1 0 6 0 0 8 1 6 2 0 0 0 6 3 0 0 Atopobium rimae (SP8) 3 389 41 0 2 1 1 3 0 7 0 1 1 0 0 16 0 59 0 0 0 0 10 0 3 4 1 0 70 230 799 1 0 10 0 2 0 Tannerella forsythia (SP82) 14 5 1 0 4 2 1 0 0 1 5 65 0 3 0 0 0 3 16 0 98 0 0 0 3 1 1 0 1 0 0 0 0 2 1 7 36 Rhizobium rhizogenes_Oral_Taxon_D34 (SP84) 0 0 0 0 0 0 0 0 0 0 17 0 0 85 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Actinomyces odontolyticus (SP86) 0 3 1 0 8 1 0 11 0 32 0 0 0 5 0 0 3 0 0 0 0 0 1 0 22 1 25 0 0 0 0 1 0 0 0 0 0 Pseudomonas psychrophila (SP9) 0 0 33 1 1 0 18 257 47 0 0 0 0 0 0 1 33 1 4 6 0 10 16 2 3 1 2 0 9 0 0 1 0 27 1 0 0 Streptococcus australis (SP90) 5 0 6 0 4 0 0 0 0 3 2 0 0 15 0 0 0 0 0 0 0 0 1 0 54 0 1 0 0 0 0 0 0 0 0 0 0 Acinetobacter baumannii_nov_95.112% (SPN110) 0 1 0 0 0 33 0 0 0 0 0 0 0 0 0 5 3 2 0 8 1489 0 0 1 2 18 1 100 4 0 1 1 43 0 0 0 0 Acinetobacter baumannii_nov_94.888% (SPN133) 17 5 0 0 11 1 0 34 12 9 0 0 38 0 0 22 0 3 32 9 0 26 0 10 7 1 11 2 6 0 4 2 0 8 3 13 0 Rhodocyclus sp._oral_taxon_028_nov_83.537% (SPN144) 4 6 4 1 12 11 0 18 4 0 3 0 0 1 0 26 56 28 1 1 3 3 4 1 7 0 2 0 36 15 0 10 1 3 6 7 0 Pseudomonas fluorescens_nov_96.495% (SPN153) 2 0 1 0 2 7 1 150 30 0 0 0 0 0 0 0 0 3 2 8 0 12 9 0 1 0 3 0 6 0 0 0 0 14 2 0 0 Rhodocyclus sp._oral_taxon_028_nov_82.759% (SPN164) 5 3 47 3 19 9 1 8 3 0 6 0 3 1 0 7 6 12 23 1 7 0 2 0 0 0 2 0 0 4 6 4 0 2 2 61 0 Sphingomonas echinoides_nov_95.642% (SPN174) 0 0 0 0 0 0 0 0 0 0 3 0 0 68 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 26 0 0 0 0 0 Variovorax paradoxus_nov_86.680% (SPN184) 1 0 0 0 0 0 0 3 0 0 0 0 2 0 0 0 4 0 1 3 0 0 1 0 1 0 0 0 0 0 0 0 0 3 0 0 136 Pseudomonas stutzeri_nov_94.057% (SPN191) 0 0 3 0 0 0 5 53 12 0 0 0 1 0 0 0 4 1 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 2 0 0 0 Burkholderia cepacia_nov_95.688% (SPN193) 0 0 0 0 0 0 0 0 0 0 12 0 0 82 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 Leptothrix sp._oral_taxon_025_nov_86.100% (SPN202) 0 5 3 10 0 2 0 0 0 0 0 0 10 0 0 0 1 0 1 0 1 5 1 18 0 0 2 0 0 0 0 0 0 4 0 0 3 Cupriavidus gilardii_nov_82.992% (SPN213) 0 0 0 0 0 16 0 20 0 0 3 1 0 0 0 7 5 3 5 0 0 0 3 0 0 0 1 1 0 1 0 0 0 2 0 5 0 Nitrosomonas sp._Is79A3_nov_83.367% (SPN224) 12 0 7 0 2 0 0 1 1 7 1 2 0 8 1 0 3 0 1 1 1 0 0 0 19 0 2 0 1 1 0 9 0 1 0 0 0 Acinetobacter baumannii_nov_93.661% (SPN233) 2 0 0 0 0 0 0 0 2 0 0 0 2 0 0 2 0 2 44 3 0 1 1 0 1 0 2 0 0 9 0 2 0 0 0 1 0 Pseudomonas fluorescens_nov_96.495% (SPN244) 1 0 0 0 0 3 1 52 9 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 0 0 3 1 0 0 Acinetobacter sp._oral_taxon_408_nov_93.429% (SPN262) 45 1 0 0 21 4 0 215 65 15 0 0 27 1 0 37 0 20 80 43 0 102 1 5 19 1 28 3 18 3 4 5 0 49 14 18 0 Burkholderia cepacia_nov_91.020% (SPN33) 0 0 0 0 0 0 0 1 0 0 5 0 1 70 5 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 19 2 0 0 0 0 Ottowia sp._oral_taxon_894_nov_84.568% (SPN91) 22 3 10 0 0 6 0 28 0 7 0 0 1 0 0 26 12 2 3 24 15 0 24 1 6 0 5 43 0 12 3 8 1 57 1 0 5