K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_13_.S_bacterium_MOT_181_nov_91_189 3.02779057462 cKO_D0_Fecal 2.74499573435 0.00108208452825 K_Bacteria.P_Firmicutes.C_multiclass 3.60280576447 WT_D0_Fecal 3.31418960871 0.000332752168841 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Anaerotruncus 2.338483458 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae 3.95039746771 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae 4.26962511586 WT_D0_Fecal 3.95306665569 0.000798040302698 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Rhizobiaceae.G_Rhizobium 1.51896746189 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_ 5.28920761434 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ramlibacter.S_monticola 3.6221572465 KO_D0_Fecal 3.33677227427 0.00010012050498 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae.G_Helicobacter.S_ganmani 3.76068427123 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Xanthomonadales.F_Rhodanobacteraceae 2.69677444139 KO_D0_Fecal 2.61960398617 6.05064446613e-05 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_caecimuris_nov_94_156 2.84833183118 cKO_D0_Fecal 2.68311309409 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_.S_bacterium_MOT_171_nov_93_096 3.72867837619 cKO_D0_Fecal 3.41128416285 0.00108208452825 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Parvibacter.S_caecicola 2.4824873502 - K_Bacteria.P_Proteobacteria 5.04180123503 KO_D0_Fecal 4.64774643316 0.000313749184518 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_2_ 2.90561293869 KO_D0_Fecal 2.74583735764 0.00399050367379 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_EubacterialesFamilyXIII_IncertaeSedis.G_Aminipila.S_butyrica_nov_88_544 2.44923748777 KO_D0_Fecal 2.59511879635 0.0146306874653 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides.S_multispecies_sppn255_2_nov_96_552 3.15488346948 WT_D0_Fecal 2.88438093102 0.00105249746183 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Microbacteriaceae.G_Cryobacterium 2.62474851699 KO_D0_Fecal 2.46513640986 0.0133223527763 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_86_640 3.35298938124 cKO_D0_Fecal 3.06789696271 0.000133365938175 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae 3.27323650185 KO_D0_Fecal 3.0101185137 0.0014914323789 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_3_.S_bacterium_MOT_150_nov_96_172 2.48830494051 KO_D0_Fecal 2.64371063454 0.00175139880785 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Zoogloeaceae.G_Azoarcus 2.51760919549 KO_D0_Fecal 2.52267163631 0.000610129437371 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_ 4.41965882589 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales 5.59764379395 WT_D0_Fecal 5.13662261673 0.0023604177411 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales.F_Granulosicoccaceae.G_Sulfuriflexus.S_mobilis_nov_90_271 2.47550290291 KO_D0_Fecal 2.75769298005 0.000272463418108 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_2_.S_bacterium_MOT_149_nov_95_704 2.72236678805 KO_D0_Fecal 2.70376263452 0.00355795797517 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Papillibacter.S_cinnamivorans_nov_93_795 1.97063115158 - K_Bacteria.P_Bacteroidetes.C_Sphingobacteriia.O_Sphingobacteriales 2.38656235524 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_.S_bacterium_HMT_093_nov_90_215 2.64792004783 KO_D0_Fecal 2.7645414616 0.00102386119642 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_88_046 2.74727791036 WT_D0_Fecal 2.66884854615 0.0327039759204 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Pseudoflavonifractor 2.95923365563 WT_D0_Fecal 2.66898797034 0.00088675039411 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_.S_bacterium_HMT_093_nov_87_381 2.73855992935 KO_D0_Fecal 2.48821344179 0.00476967990105 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_multigenus.S_multispecies_spp164_2 0.0 - K_Bacteria.P_Bacteroidota.C_Saprospiria.O_Saprospirales.F_Haliscomenobacteraceae.G_Portibacter 2.72451628769 KO_D0_Fecal 2.60201523451 0.00043458643533 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_3_ 3.39940480772 WT_D0_Fecal 3.08114409507 0.00658425955372 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_7_.S_bacterium_MOT_154 3.45467280488 WT_D0_Fecal 3.15327654165 0.000529000490529 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_2_.S_bacterium_MOT_162_nov_94_712 2.29744350171 KO_D0_Fecal 2.36787992454 0.0392097412421 K_Bacteria.P_Bacteroidota.C_Saprospiria.O_Saprospirales.F_Haliscomenobacteraceae.G_Portibacter.S_lacus_nov_89_220 2.72451628769 KO_D0_Fecal 2.60105466507 0.00043458643533 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_87_398 3.79252112007 cKO_D0_Fecal 3.5436733073 0.00742701256165 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_.S_bacterium_MOT_180_nov_94_479 3.93154105752 cKO_D0_Fecal 3.72531316004 0.00742701256165 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Nocardioidaceae.G_Nocardioides.S_kribbensis 0.0 - K_Bacteria.P_Firmicutes.C_multiclass.O_multiorder.F_multifamily 3.60280576447 WT_D0_Fecal 3.31419000439 0.000332752168841 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia.S_faecis 3.23947141668 WT_D0_Fecal 2.95235501656 0.00304402176745 K_Bacteria.P_Deferribacteres 2.95701882868 WT_D0_Fecal 2.63649651193 0.00471064255506 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Methylocystaceae.G_Methylocystis 2.58000960521 KO_D0_Fecal 2.51939845803 0.00377451735053 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_93_764 3.51643055387 KO_D0_Fecal 3.23688699828 0.00335518722139 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Kiloniellaceae.G_Aestuariispira.S_insulae_nov_86_936 2.47353177213 KO_D0_Fecal 2.58540369215 0.00491670185215 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_10_.S_bacterium_MOT_175_nov_93_525 2.34233784183 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae.G_Pseudomonas.S_vancouverensis 2.49276800292 KO_D0_Fecal 2.64961778943 0.00625718803645 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia.S_intestinalis_nov_95_683 2.46719058804 KO_D0_Fecal 2.51677754668 0.0146070644625 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_sp__MOT_127 3.58178134447 WT_D0_Fecal 3.29015145584 0.00120570503787 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_87_398 3.37665455874 cKO_D0_Fecal 3.13290769113 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae 5.13414042277 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae 4.25808564488 cKO_D0_Fecal 3.89968331283 0.0419756048369 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Aeromonadales.F_Aeromonadaceae.G_Aeromonas.S_veronii 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Clostridium.S_oryzae_nov_88_942 2.54981244578 KO_D0_Fecal 2.59338192696 0.00616084531492 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae 2.95915892286 KO_D0_Fecal 2.68400585878 0.000518707134048 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Zoogloeaceae.G_Azoarcus.S_olearius_nov_91_591 2.51760919549 KO_D0_Fecal 2.52516345799 0.000610129437371 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Acidovorax.S_wautersii 2.53475618041 KO_D0_Fecal 2.41990575082 0.00048440336838 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_.S_multispecies_spp115_2 2.75201848743 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae 3.34508174282 KO_D0_Fecal 3.0898984257 0.00010012050498 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_96_154 2.98784800584 KO_D0_Fecal 2.74718694283 0.000608244405018 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae.G_Ohtaekwangia 2.52706007228 KO_D0_Fecal 2.41634901976 0.00558932611073 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae.G_Xanthovirga 0.0 - K_Bacteria.P_Acidobacteria.C_Vicinamibacteria.O_Vicinamibacterales 2.85429297521 KO_D0_Fecal 2.64742728077 0.000167206498451 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_10_.S_bacterium_MOT_175_nov_90_618 3.10816613475 KO_D0_Fecal 2.86642835613 0.000372170326927 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_2_.S_bacterium_MOT_162_nov_95_433 3.15848767342 WT_D0_Fecal 2.90739355884 0.00135942241508 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_10_.S_bacterium_MOT_175_nov_90_612 2.84282734366 cKO_D0_Fecal 2.73332394604 0.00742701256165 K_Bacteria.P_Rhodothermaeota.C_Rhodothermia.O_Rhodothermales.F_Salisaetaceae.G_Roseithermus.S_sacchariphilus_nov_88_479 2.5474436293 KO_D0_Fecal 2.56426759637 0.00558932611073 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Kineosporiales.F_Kineosporiaceae.G_multigenus.S_multispecies_sppn78_3_nov_97_381 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Devosiaceae 3.23199885806 KO_D0_Fecal 2.97491984002 0.00010012050498 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_.S_bacterium_MOT_189 5.28920761434 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_EubacterialesFamilyXIII_IncertaeSedis.G_Ihubacter 2.39533767222 KO_D0_Fecal 2.50132162033 0.0280921243854 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium 3.59196344993 WT_D0_Fecal 3.32079771527 0.000661899152667 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerocolumna.S_cellulosilytica_nov_90_000 2.73713138138 cKO_D0_Fecal 2.6408935724 0.00742701256165 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae 5.58265290922 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_87_375 3.62078444536 cKO_D0_Fecal 3.37891943838 0.000133365938175 K_Bacteria.P_Bacteroidota.C_Saprospiria 2.72451628769 KO_D0_Fecal 2.59999008658 0.00043458643533 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae.G_Pseudomonas 3.05593538214 KO_D0_Fecal 2.85591057163 7.80329918658e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Acidovorax 2.53475618041 KO_D0_Fecal 2.41990854968 0.00048440336838 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Paraeggerthella.S_hongkongensis_nov_89_154 3.17610738451 cKO_D0_Fecal 2.87756757768 0.000133365938175 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Eisenbergiella 2.3078822701 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelatoclostridium.S__Clostridium_saccharogumia_nov_93_213 2.73979896961 KO_D0_Fecal 2.65980558446 0.0026731474968 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp89_2 4.19843219442 KO_D0_Fecal 3.91968268115 0.000556390743148 K_Bacteria.P_Bacteroidetes.C_Sphingobacteriia.O_Sphingobacteriales.F_Sphingobacteriaceae.G_Pedobacter 2.38656235524 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_ 3.515366398 cKO_D0_Fecal 3.24296261704 0.0477705677895 K_Bacteria.P_Rhodothermaeota.C_Rhodothermia.O_Rhodothermales.F_Salisaetaceae 2.5474436293 KO_D0_Fecal 2.57215106863 0.00558932611073 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_2_.S_bacterium_MOT_149_nov_94_272 2.44245726523 KO_D0_Fecal 2.38362563241 0.0243627908482 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_91_034 3.3084760422 WT_D0_Fecal 3.02115915707 0.000556390743148 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_multigenus.S_multispecies_spp12_7 2.9714511103 KO_D0_Fecal 2.76500408068 0.047225367956 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides.S_acidifaciens 3.60752082686 cKO_D0_Fecal 3.37104119286 0.000133365938175 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster.S_asparagiformis_nov_96_875 2.67268248553 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_multigenus.S_multispecies_spp81_2 3.27864116507 KO_D0_Fecal 3.00545698967 0.000943175411658 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus 4.97898087232 cKO_D0_Fecal 4.59525186634 0.00480106905216 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Rhodospirillaceae.G_Dongia.S_mobilis_nov_96_145 2.51237948007 KO_D0_Fecal 3.02773043399 0.000100440998482 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_thoraltensis 2.60065708632 - K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Bryobacterales.F_Bryobacteraceae 3.36556161937 KO_D0_Fecal 3.10724943121 5.90584178377e-05 K_Bacteria.P_Nitrospirae.C_Nitrospira.O_Nitrospirales.F_Nitrospiraceae.G_Nitrospira.S_moscoviensis 2.78485434448 KO_D0_Fecal 2.68154905442 0.00165724014076 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_436_nov_85_396 3.07448347216 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales 5.15505223983 cKO_D0_Fecal 4.67686296938 0.0195995239756 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_.S_bacterium_MOT_164_nov_96_154 2.81519602459 WT_D0_Fecal 2.57853760606 0.00765760670137 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Devosiaceae.G_Devosia.S_insulae 3.03939298114 KO_D0_Fecal 2.82723203459 7.80329918658e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Herminiimonas 2.67929622548 KO_D0_Fecal 2.62259370959 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_multigenus 2.83608027618 KO_D0_Fecal 2.62874730533 0.00162813375512 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus 4.23184641928 KO_D0_Fecal 3.94856245088 0.000532570085738 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__MOT_128_nov_91_954 2.43113248629 KO_D0_Fecal 2.66118293417 0.0149626300077 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_91_705 5.16358165244 WT_D0_Fecal 4.88232297519 0.000372170326927 K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales 2.61343059387 KO_D0_Fecal 2.39482936233 0.00220937441964 K_Bacteria.P_Bacteroidota 4.88346298627 cKO_D0_Fecal 4.54669249675 0.0165906388619 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_ 4.70794318147 WT_D0_Fecal 4.39882583657 0.000924506940374 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_multispecies_sppn315_2_nov_87_500 2.77631501784 WT_D0_Fecal 2.51625724933 0.000611131372437 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_90_115 3.65282232974 WT_D0_Fecal 3.38851497784 0.000372170326927 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae 3.099996823 KO_D0_Fecal 2.87739346604 0.000345026989616 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sphaerotilaceae.G_Piscinibacter 2.72747601212 KO_D0_Fecal 2.68380896169 2.83312615254e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Rhodoferax.S_saidenbachensis 2.62489263988 KO_D0_Fecal 2.74173980932 0.000124178178116 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Spirosomaceae.G_Arsenicibacter 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_multispecies_sppn175_2_nov_97_375 3.04255376483 KO_D0_Fecal 2.81002348889 0.00374193840493 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Bryobacterales.F_Bryobacteraceae.G_Paludibaculum.S_fermentans_nov_91_388 2.67803428518 KO_D0_Fecal 2.6396722521 0.000124178178116 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Romboutsia 3.49750535036 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_caecimuris_nov_89_224 3.82097332054 cKO_D0_Fecal 3.56094696493 1.37071112201e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Nevskiales 3.50511464886 KO_D0_Fecal 3.23503449282 6.05064446613e-05 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_mastitidis 2.97162640275 KO_D0_Fecal 2.7543746413 0.0200631318542 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Parabacteroides.S_goldsteinii 4.28229771082 KO_D0_Fecal 3.96211461243 0.00113430425424 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruminococcus.S_albus_nov_92_530 2.86314934515 KO_D0_Fecal 2.63114641494 0.00264047057833 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio 2.83449462521 WT_D0_Fecal 2.5288622086 0.00315653761611 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_176_nov_94_919 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_91_954 3.68851896421 WT_D0_Fecal 3.41783712371 7.01171628355e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Limnobacter 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_89_726 3.55215337062 WT_D0_Fecal 3.27303927036 8.44818778484e-05 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Nocardioidaceae.G_Nocardioides 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_ 3.97713882915 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_.S_bacterium_MOT_180_nov_94_231 3.0124495268 KO_D0_Fecal 2.75748582129 0.00488332671467 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus.S_multispecies_spp147_3 4.45877409648 KO_D0_Fecal 4.14540736716 0.00105249746183 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Paraeggerthella.S_hongkongensis_nov_92_823 3.22379415676 WT_D0_Fecal 2.86094349108 0.000943175411658 K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales.F_Anaeroplasmataceae.G_Anaeroplasma.S_abactoclasticum_nov_92_874 2.61343059387 KO_D0_Fecal 2.39483430677 0.00220937441964 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_ 4.3194939173 WT_D0_Fecal 4.01004609783 0.000975015205904 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Aggregatilineales.F_Aggregatilineaceae.G_Aggregatilinea.S_lenta_nov_87_081 2.51534628913 KO_D0_Fecal 2.60506601301 0.00200327059226 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomonadales.F_Hyphomonadaceae.G_Vitreimonas 2.97123491203 KO_D0_Fecal 2.76724973205 6.05064446613e-05 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_caecimuris 3.24069076684 cKO_D0_Fecal 2.97226783529 0.00425557299513 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_EubacterialesFamilyXIII_IncertaeSedis 3.27074741743 KO_D0_Fecal 3.02757901955 0.00105249746183 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales.F_Enterobacteriaceae.G_multigenus 4.06864792416 KO_D0_Fecal 3.72391984317 0.000177520610365 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_equolifaciens_nov_94_498 2.17706941329 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_ 4.44688811139 - K_Bacteria.P_Acidobacteria.C_Holophagae.O_Holophagales 3.07074918629 KO_D0_Fecal 2.83065608923 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Romboutsia.S_ilealis 3.49750535036 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Rhizobiaceae 1.51896746189 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Parvibacter 2.4824873502 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomonadales.F_Hyphomonadaceae.G_Vitreimonas.S_flagellata_nov_95_465 2.5582289495 KO_D0_Fecal 2.59485880268 0.00165724014076 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_88_554 4.13936055416 cKO_D0_Fecal 3.8914171089 0.000133365938175 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Xanthobacteraceae 2.96559567636 KO_D0_Fecal 2.79960993201 0.000162299441062 K_Bacteria.P_Nitrospirae 2.78485434448 KO_D0_Fecal 2.68160734642 0.00165724014076 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pseudomonadales 3.05593538214 KO_D0_Fecal 2.85607484737 7.80329918658e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale 3.9558031676 WT_D0_Fecal 3.34756054159 0.0263314333272 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Bacillaceae.G_Priestia 0.915981693014 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Phocaeicola.S_sartorii 3.21282994803 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Rhodospirillaceae.G_Dongia.S_multispecies_sppn313_2_nov_96_386 2.99411179946 KO_D0_Fecal 2.7929071087 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Anaeromassilibacillus.S_senegalensis_nov_93_765 2.41641575829 WT_D0_Fecal 2.42271811925 0.00490618801731 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_.F_Mollicutes__F_1_.G_Mollicutes__G_1_ 2.41291252028 WT_D0_Fecal 2.638860238 0.00335518722139 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_.S_bacterium_MOT_167 2.63408541822 KO_D0_Fecal 2.50721603411 0.00808390232469 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_89_800 2.86969541353 cKO_D0_Fecal 2.69217737012 0.00108208452825 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_mucosicola_nov_97_826 2.17070600457 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Eisenbergiella.S_massiliensis 2.10966605837 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Microbacteriaceae.G_Cryobacterium.S_psychrotolerans 2.62474851699 KO_D0_Fecal 2.46483517806 0.0133223527763 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_bacterium_MOT_159_nov_94_712 3.22058708585 WT_D0_Fecal 2.94002389216 0.00103050405851 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sphaerotilaceae 2.72747601212 KO_D0_Fecal 2.68379025463 2.83312615254e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_4_.S_bacterium_MOT_151_nov_96_651 2.26967353737 KO_D0_Fecal 2.66414468858 0.0237084660596 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae 4.73175325406 KO_D0_Fecal 4.36295270221 0.00127826703152 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae 4.41097861944 KO_D0_Fecal 3.9698253906 0.00630182083026 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Marvinbryantia.S_formatexigens_nov_91_435 3.36805201877 cKO_D0_Fecal 3.15539109968 0.0436987936463 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_10_.S_bacterium_MOT_175_nov_96_394 3.05934729151 KO_D0_Fecal 2.82955770966 0.00146308738314 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Amedibacillus 3.07241205824 WT_D0_Fecal 2.7920034541 0.000540276698838 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_97_596 3.19765335737 KO_D0_Fecal 2.88193482175 0.00124069187319 K_Bacteria.P_Verrucomicrobia.C_Verrucomicrobiae.O_Verrucomicrobiales.F_Akkermansiaceae.G_Akkermansia 5.37031886628 WT_D0_Fecal 4.9831285231 0.0107923614669 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales 2.74526943804 KO_D0_Fecal 2.57412127542 0.00456725470674 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Turicibacteraceae 4.06518031438 cKO_D0_Fecal 3.72686279399 0.0434613048921 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_multispecies_sppn245_2_nov_96_682 3.02812886102 KO_D0_Fecal 2.82032779132 0.00137504128456 K_Bacteria.P_Acidobacteria.C_Acidobacteriia 3.50928852426 KO_D0_Fecal 3.22345890064 0.000228229141341 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerostipes.S_caccae 3.10494982351 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_ 2.41291252028 WT_D0_Fecal 2.63886686418 0.00335518722139 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae 2.76372697457 KO_D0_Fecal 2.68615061987 5.90584178377e-05 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Occallatibacter 2.66443985201 WT_D0_Fecal 2.41497948682 0.0104275613802 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_3_.S_bacterium_MOT_163_nov_94_005 2.52348940222 WT_D0_Fecal 2.40757987862 0.00191251785301 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Xanthomonadales.F_Rhodanobacteraceae.G_Dokdonella.S_fugitiva_nov_97_955 2.69677444139 KO_D0_Fecal 2.62250238951 6.05064446613e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_senegalensis_nov_93_686 3.03697693533 cKO_D0_Fecal 2.80806607918 0.00742701256165 K_Bacteria.P_Firmicutes.C_Erysipelotrichia 4.73462073956 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Hungatella 2.59523448672 - K_Bacteria.P_Nitrospirae.C_Nitrospira.O_Nitrospirales.F_Nitrospiraceae 2.78485434448 KO_D0_Fecal 2.68137938336 0.00165724014076 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Collimonas.S_fungivorans_nov_91_403 2.84777987143 KO_D0_Fecal 2.68041993735 0.000100440998482 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae.G_Pseudomonas.S_multispecies_spp189_4 2.59064223623 KO_D0_Fecal 2.58769540809 0.000228170667658 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Bryobacterales 3.36556161937 KO_D0_Fecal 3.1072411414 5.90584178377e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_9_ 3.4460128993 WT_D0_Fecal 3.1571401965 0.000943175411658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Butyricicoccus 2.87741782318 KO_D0_Fecal 2.80031434925 0.000905655466291 K_Bacteria.P_Actinobacteria 4.40788602483 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Kiloniellaceae 2.90481806207 KO_D0_Fecal 2.7253870729 0.00135942241508 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomonadales.F_Hyphomonadaceae 2.97123491203 KO_D0_Fecal 2.76706741966 6.05064446613e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Aeromonadales 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Hyphomicrobiaceae.G_Hyphomicrobium.S_multispecies_sppn5_2_nov_94_940 2.78248826046 KO_D0_Fecal 2.66091979687 0.000127801500629 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_.F_Mollicutes__F_1_.G_Mollicutes__G_1_.S_bacterium_MOT_186_nov_87_104 2.41291252028 WT_D0_Fecal 2.63885891523 0.00335518722139 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_2_.S_bacterium_MOT_162_nov_95_913 3.58727978734 WT_D0_Fecal 3.29534612736 0.000661899152667 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Schlegelella.S_aquatica_nov_90_971 2.68827735422 KO_D0_Fecal 2.73925161837 5.90584178377e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_86_957 3.74233902462 WT_D0_Fecal 3.45776571732 0.000177520610365 K_Bacteria.P_Deferribacteres.C_Deferribacteres.O_Deferribacterales.F_Mucispirillaceae.G_Mucispirillum 2.95701882868 WT_D0_Fecal 2.63649593017 0.00471064255506 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sutterellaceae.G_Parasutterella.S_excrementihominis_nov_94_331 3.27165468543 WT_D0_Fecal 2.99106403574 0.00119889183954 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides.S_caecimuris 2.98964628441 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas.S_multispecies_spp159_2 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia.S_faecis_nov_93_990 2.98618893996 KO_D0_Fecal 2.76516282471 0.00625718803645 K_Bacteria.P_Acidobacteria 3.70948571923 KO_D0_Fecal 3.4148073273 7.09992738038e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Rodentibacter 4.02401730628 KO_D0_Fecal 3.73005399959 0.00261470443282 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_97_356 3.05435163136 KO_D0_Fecal 2.86824444154 0.00102386119642 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae 3.85481850891 cKO_D0_Fecal 3.52109674345 0.028469650135 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_97_590 2.98000857157 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides.S_multispecies_spp148_2 3.90852004299 WT_D0_Fecal 3.61278528141 8.44818778484e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae 3.18537301352 WT_D0_Fecal 2.72709317462 0.0172717802161 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_86_089 3.46290228392 cKO_D0_Fecal 3.18761577707 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnoclostridium.S__Clostridium_polysaccharolyticum_nov_90_852 3.32203300144 cKO_D0_Fecal 3.07312634015 0.0436987936463 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Mailhella 3.47995148325 KO_D0_Fecal 3.18743930789 0.000332752168841 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Aggregatilineales.F_Aggregatilineaceae.G_Aggregatilinea.S_lenta_nov_86_811 2.43606648044 KO_D0_Fecal 2.29739590113 0.00537743005849 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_equolifaciens_nov_92_029 2.84853116403 KO_D0_Fecal 2.68198906202 0.00374193840493 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_multifamily 3.2399081784 WT_D0_Fecal 2.95601125008 0.0023745460248 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales 4.02452599951 WT_D0_Fecal 3.6647890524 0.00124161441975 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_.S_bacterium_MOT_179_nov_94_501 2.97569870928 cKO_D0_Fecal 2.73876470494 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_2_.S_bacterium_MOT_162 3.70274138165 WT_D0_Fecal 3.28761925322 0.0219970928362 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Immundisolibacterales 0.0 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales.F_Thiobacillaceae 2.83076430162 KO_D0_Fecal 2.74243965597 0.000228170667658 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales 4.07620989014 KO_D0_Fecal 3.73231383062 0.000296152580559 K_Bacteria.P_Firmicutes 5.84288388238 cKO_D0_Fecal 5.28338784684 0.00645919875897 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Devosiaceae.G_Devosia.S_multispecies_sppn342_2_nov_96_145 2.78613445463 KO_D0_Fecal 2.62935827817 0.00096468459984 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_89_919 2.97131047136 cKO_D0_Fecal 2.77091532076 0.00108208452825 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Spirosomaceae 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas.S_limnosediminicola 2.76873181389 KO_D0_Fecal 2.68980292139 4.49246337924e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_1_ 2.64247682054 - K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales.F_Anaeroplasmataceae 2.61343059387 KO_D0_Fecal 2.39483179962 0.00220937441964 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus 4.45877409648 KO_D0_Fecal 3.99970355228 0.0241795027143 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_178 4.20943131709 - K_Bacteria.P_Bacteroidota.C_Bacteroidia 4.88346298627 cKO_D0_Fecal 4.55342771956 0.0100250665574 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Bacillaceae 2.63519552677 KO_D0_Fecal 2.49038618052 0.00127470168098 K_Bacteria.P_Saccharibacteria__TM7_ 3.52191038561 - K_Bacteria.P_Firmicutes.C_multiclass.O_multiorder.F_multifamily.G_multigenus.S_multispecies_sppn42_3_nov_87_668 3.60280576447 WT_D0_Fecal 3.31419001636 0.000332752168841 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_177 2.54975983681 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_176 2.79688371943 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Paenibacillus.S_aceris 2.57687932143 KO_D0_Fecal 2.55732023706 0.0277734187433 K_Bacteria.P_Rhodothermaeota 2.5474436293 KO_D0_Fecal 2.56689043506 0.00558932611073 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Xanthobacteraceae.G_Pseudolabrys 2.96559567636 KO_D0_Fecal 2.79946553299 0.000162299441062 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Rhodospirillaceae.G_Dongia 3.11790235153 KO_D0_Fecal 2.89017733404 5.90584178377e-05 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales 3.95039746771 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_1_.S_bacterium_MOT_147_nov_97_143 2.64247682054 KO_D0_Fecal 2.66859746998 0.0143034140456 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_177_nov_94_606 1.89874109443 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Myxococcales.F_Polyangiaceae 2.78451152736 KO_D0_Fecal 2.65162389332 4.49246337924e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__MOT_128 4.31973159475 WT_D0_Fecal 4.03425805577 3.83628485397e-05 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_muris_nov_88_745 2.98435023053 cKO_D0_Fecal 2.96865352193 1.37071112201e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_88_235 2.95465168405 WT_D0_Fecal 2.90918789391 0.000103480418246 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_bacterium_MOT_161 2.61119775576 KO_D0_Fecal 2.43322594785 0.0155484689743 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Eubacteriaceae__XV_.G_Eubacterium.S_ramulus_nov_87_500 3.09648662006 cKO_D0_Fecal 2.88396770304 0.0436987936463 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_bacterium_MOT_160 3.71807215321 WT_D0_Fecal 3.4469581485 0.00348892507199 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Longibaculum 3.12736230344 WT_D0_Fecal 2.9209768197 0.000762786707675 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Collimonas 3.10528528272 KO_D0_Fecal 2.90715269896 5.90584178377e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Faecalicatena.S_orotica_nov_95_904 3.14410477025 KO_D0_Fecal 2.86621523363 0.00236196345807 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Turicibacteraceae.G_Turicibacter.S_sanguinis_nov_96_372 2.82222272256 WT_D0_Fecal 2.56585105002 0.00348892507199 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_EubacterialesFamilyXIII_IncertaeSedis.G_Ihubacter.S_massiliensis_nov_97_596 2.39533767222 KO_D0_Fecal 2.50132908789 0.0280921243854 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Granulicella 2.1886332089 WT_D0_Fecal 2.54925144978 0.0280921243854 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae.G_Helicobacter.S_typhlonius 4.3497811416 KO_D0_Fecal 4.03312326688 0.000296152580559 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Caproicibacter.S_fermentans_nov_89_895 3.279613624 cKO_D0_Fecal 2.96285945427 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_MOT_168_nov_94_792 4.05737881753 cKO_D0_Fecal 3.69282001202 0.000133365938175 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_.S_multispecies_spp87_2 3.23739619036 WT_D0_Fecal 2.96035730287 0.00740597072037 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia 4.22055046704 cKO_D0_Fecal 3.91960565816 0.00144991550016 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerotaenia.S_torta_nov_97_590 3.29768893654 KO_D0_Fecal 3.0183821477 0.00205674423262 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Pseudoflavonifractor.S_phocaeensis_nov_89_474 2.95923365563 WT_D0_Fecal 2.66898813231 0.00088675039411 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruminococcus.S_bromii 3.41786358438 KO_D0_Fecal 3.15450816847 0.0053665516294 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sutterellaceae.G_Turicimonas 3.54665169637 KO_D0_Fecal 3.16007782591 0.0313663095635 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Edaphobacter 2.4443359252 KO_D0_Fecal 2.31735618674 0.00100778542905 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium 2.97162640275 KO_D0_Fecal 2.75437446013 0.0200631318542 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnoclostridium.S__Clostridium_populeti_nov_95_422 2.45895348733 - K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae.G_Ohtaekwangia.S_koreensis_nov_94_253 2.52706007228 KO_D0_Fecal 2.41733684979 0.00558932611073 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Bacillaceae.G_multigenus 2.62682507338 KO_D0_Fecal 2.47634072051 0.00390165613234 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091_nov_82_353 2.45514608189 WT_D0_Fecal 2.50598854222 0.0130232864288 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Paraeggerthella 3.39222248401 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Carnobacteriaceae__G_1_ 3.31584788812 KO_D0_Fecal 3.0579733982 0.00629788772464 K_Bacteria.P_Firmicutes.C_Erysipelotrichi 5.58265290922 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Butyricicoccus.S_pullicaecorum_nov_94_737 2.87741782318 KO_D0_Fecal 2.8003132469 0.000905655466291 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_.S_bacterium_MOT_164 4.15498639731 WT_D0_Fecal 3.83201024412 0.0010962569675 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_.S_bacterium_MOT_165 3.43844746526 WT_D0_Fecal 3.1789598148 0.00105249746183 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_922 3.09997898668 WT_D0_Fecal 2.83650261673 0.00135942241508 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomonadales 2.97123491203 KO_D0_Fecal 2.7676794028 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Ileibacterium 5.27792195117 cKO_D0_Fecal 4.98098508163 0.00476400457736 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_436_nov_85_223 2.72690667822 cKO_D0_Fecal 3.13592938666 0.0436987936463 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelatoclostridium 4.71194070545 KO_D0_Fecal 4.34398524248 0.00116824810321 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Parabacteroides 4.33822947281 KO_D0_Fecal 3.87380963887 0.00803458443888 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_4_.S_bacterium_MOT_151_nov_97_608 2.53911224401 KO_D0_Fecal 2.80157823926 0.00265675879914 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Desulfotomaculaceae 2.40659895393 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_.S_bacterium_MOT_171_nov_95_422 3.16303176994 KO_D0_Fecal 2.90799744312 0.00138449861108 K_Bacteria.P_Actinobacteria.C_Acidimicrobiia.O_Acidimicrobiales 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_ 3.515366398 cKO_D0_Fecal 3.24823052274 0.0477705677895 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacter 3.1557407414 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sutterellaceae.G_Parasutterella 3.4001672026 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_EubacterialesFamilyXIII_IncertaeSedis.G_Aminipila 3.20865309846 KO_D0_Fecal 2.96880433209 0.0013378535981 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales.F_Thiobacillaceae.G_Thiobacillus.S_thioparus 2.83076430162 KO_D0_Fecal 2.74213914116 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_6_.S_bacterium_MOT_153 1.97102631849 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_.S_bacterium_MOT_171_nov_91_213 3.04873947944 cKO_D0_Fecal 2.785858918 0.00108208452825 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales.F_Enterobacteriaceae.G_Klebsiella 2.31328480102 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Methylobacteriaceae 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerostipes 3.10494982351 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides.S_uniformis_nov_95_893 3.8172354929 cKO_D0_Fecal 3.55182029988 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_6_ 3.44707881944 WT_D0_Fecal 3.11557055481 0.00135942241508 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_88_761 3.1258277253 WT_D0_Fecal 2.92460055999 0.000103480418246 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_178_nov_92_089 3.12237266357 cKO_D0_Fecal 2.85269317481 0.0436987936463 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Parvibaculaceae 2.21236778218 WT_D0_Fecal 2.59039788111 0.0309734620672 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Faecalicatena.S_multispecies_sppn226_2_nov_97_590 3.46087562326 KO_D0_Fecal 3.20137952744 0.00115321835529 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae 4.33822947281 KO_D0_Fecal 3.87380963887 0.00803458443888 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Faecalicatena.S_orotica 2.51538380506 KO_D0_Fecal 2.33557533031 0.0316370613566 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_176_nov_97_608 3.47870771767 KO_D0_Fecal 3.22315574951 0.00131062434558 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella 4.32236338344 WT_D0_Fecal 3.99950095799 0.000286094067045 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria 4.25690841269 KO_D0_Fecal 3.87325684675 0.000828688135954 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Devosiaceae.G_Devosia 3.23199885806 KO_D0_Fecal 2.97455815894 0.00010012050498 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales.F_Thiobacillaceae.G_Thiobacillus 2.83076430162 KO_D0_Fecal 2.74234953968 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnoclostridium 3.95409844821 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelatoclostridium.S__Clostridium_cocleatum 4.7033296378 KO_D0_Fecal 4.33386060133 0.00116824810321 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Rodentibacter.S_pneumotropicus 4.02401730628 KO_D0_Fecal 3.73005417204 0.00261470443282 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae 4.23184641928 KO_D0_Fecal 3.94856895154 0.000532570085738 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus.S_murinus 3.93483711832 cKO_D0_Fecal 3.60169269621 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_.F_Mollicutes__F_1_ 2.41291252028 WT_D0_Fecal 2.63886552155 0.00335518722139 K_Bacteria.P_Verrucomicrobia.C_Verrucomicrobiae.O_Verrucomicrobiales.F_Akkermansiaceae.G_Akkermansia.S_muciniphila 5.37031886628 WT_D0_Fecal 4.9831285231 0.0107923614669 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales.F_Enterobacteriaceae.G_Klebsiella.S_variicola 2.17100818475 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_.S_bacterium_MOT_171_nov_96_875 2.19427953235 - K_Bacteria 6.0 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_multigenus.S_multispecies_spp23_5 3.62974611986 KO_D0_Fecal 3.33985972399 0.000748673899337 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales 2.95915892286 KO_D0_Fecal 2.68400628486 0.000518707134048 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales 4.25808564488 cKO_D0_Fecal 3.89968331283 0.0419756048369 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_93_822 3.55112940827 WT_D0_Fecal 3.27900147397 0.000115268653912 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_danieliae 2.93664511311 KO_D0_Fecal 2.6060705774 0.0220015946764 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Ileibacterium.S_valens 5.27792195117 cKO_D0_Fecal 4.98098508163 0.00476400457736 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus.S_johnsonii 4.65870762628 cKO_D0_Fecal 4.30200394791 0.00211454278604 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Spirosomaceae.G_Arsenicibacter.S_rosenii_nov_97_936 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_9_.S_bacterium_MOT_174_nov_96_627 2.98239865534 WT_D0_Fecal 2.73544227816 0.00164441960656 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_3_ 3.58987277846 KO_D0_Fecal 3.22456817697 0.0225469766762 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster.S_multispecies_spp195_2 2.02765097554 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Kineosporiales.F_Kineosporiaceae 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_91_724 3.24715279226 WT_D0_Fecal 3.02572440176 5.20049774904e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacter.S_splanchnicus_nov_93_807 2.96973108371 KO_D0_Fecal 2.75894195091 0.000817637961578 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sutterellaceae.G_Parasutterella.S_excrementihominis_nov_94_578 3.4001672026 cKO_D0_Fecal 3.10890985885 1.37071112201e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Nevskiales.F_Steroidobacteraceae.G_Povalibacter 3.50511464886 KO_D0_Fecal 3.23584590948 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_4_.S_bacterium_MOT_151 2.09587363653 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_86_089 3.44987583358 cKO_D0_Fecal 3.20418638606 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_multigenus.S_multispecies_sppn211_2_nov_97_590 2.83608027618 KO_D0_Fecal 2.62874987068 0.00162813375512 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_90_575 3.5343133947 WT_D0_Fecal 3.24734596002 0.00110422751324 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales 2.98668414399 KO_D0_Fecal 2.81674920641 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Gluceribacter.S_canis_nov_93_501 3.40657032198 cKO_D0_Fecal 3.08516356405 0.00742701256165 K_Bacteria.P_Firmicutes.C_multiclass.O_multiorder.F_multifamily.G_multigenus 3.60280576447 WT_D0_Fecal 3.31418999786 0.000332752168841 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_fairfieldensis 2.2444006506 KO_D0_Fecal 2.50535103508 0.0237084660596 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_bacterium_MOT_158_nov_96_635 2.65031109674 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_.S_bacterium_MOT_184 2.99750576564 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_3_.S_bacterium_MOT_163_nov_93_765 3.33738815847 WT_D0_Fecal 3.05914608669 0.00200494544163 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Thermomarinilinea.S_lacunifontana_nov_86_779 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Clostridium.S_disporicum 4.04021082769 cKO_D0_Fecal 3.69126510103 1.37071112201e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104 2.86981959342 KO_D0_Fecal 2.6819339414 0.00482361916181 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_92_694 3.13674282087 WT_D0_Fecal 2.9133842363 0.000459229595502 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Parabacteroides.S_merdae_nov_95_642 3.31566306899 WT_D0_Fecal 3.04632573269 0.000998617163136 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Xanthomonadales.F_Rhodanobacteraceae.G_Dokdonella 2.69677444139 KO_D0_Fecal 2.62215228444 6.05064446613e-05 K_Bacteria.P_Actinobacteria.C_Acidimicrobiia 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus.S_taiwanensis 4.14096343628 - K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Bryobacterales.F_Bryobacteraceae.G_Paludibaculum 3.36556161937 KO_D0_Fecal 3.10727335389 5.90584178377e-05 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Aggregatilineales.F_Aggregatilineaceae 2.77854292548 KO_D0_Fecal 2.64846272403 5.90584178377e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Marvinbryantia 3.36805201877 cKO_D0_Fecal 3.12942517912 0.0436987936463 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_senegalensis_nov_95_862 3.75866191335 WT_D0_Fecal 3.48484196322 0.00105249746183 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Paenibacillus 3.27323650185 KO_D0_Fecal 3.00990745767 0.0014914323789 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_.S_bacterium_MOT_179_nov_92_548 3.0021520742 WT_D0_Fecal 2.72053258781 0.00105679367035 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Kiloniellaceae.G_Kiloniella.S_majae_nov_88_836 2.70385763976 KO_D0_Fecal 2.59702883862 0.0026731474968 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Caproicibacter 3.279613624 cKO_D0_Fecal 2.96285776992 0.00108208452825 K_Bacteria.P_Rhodothermaeota.C_Rhodothermia.O_Rhodothermales 2.5474436293 KO_D0_Fecal 2.57032302708 0.00558932611073 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_4_ 3.23408442614 WT_D0_Fecal 2.98249388096 0.00124069187319 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Herbaspirillum.S_seropedicae_nov_92_273 2.66399879318 KO_D0_Fecal 2.56460678659 0.000272463418108 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Caproiciproducens.S_galactitolivorans_nov_89_737 2.28283905969 KO_D0_Fecal 2.45419828341 0.0144048927813 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_178_nov_97_129 3.34664211843 WT_D0_Fecal 3.05565927043 0.00277456004515 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Schlegelella 2.68827735422 KO_D0_Fecal 2.73950930324 5.90584178377e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacter.S_splanchnicus_nov_92_562 3.1557407414 cKO_D0_Fecal 2.84859467324 0.00108208452825 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Millionella.S_massiliensis_nov_92_874 2.9339623723 WT_D0_Fecal 2.89915300549 0.000103480418246 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Faecalicatena 4.41669668596 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruminiclostridium.S_papyrosolvens_nov_88_756 3.37413541491 KO_D0_Fecal 3.06955740912 0.000998617163136 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales.F_Thioalkalispiraceae.G_Thiohalophilus 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Lawsonibacter 3.39762616197 KO_D0_Fecal 3.16368059601 0.00040186874536 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Eubacteriaceae__XV_.G_Eubacterium.S_coprostanoligenes_nov_95_683 3.85861912036 WT_D0_Fecal 3.55744670182 0.000419868839729 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Turicibacteraceae.G_Turicibacter.S_sanguinis_nov_95_923 4.06518031438 cKO_D0_Fecal 3.74076434986 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia 5.19537653786 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales 2.97162640275 KO_D0_Fecal 2.75437334532 0.0200631318542 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_414 2.82531680065 WT_D0_Fecal 2.69113329806 0.000936092004002 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Kiloniellaceae.G_Kiloniella 2.70385763976 KO_D0_Fecal 2.59702812186 0.0026731474968 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_bacterium_MOT_158_nov_95_204 3.40046733681 WT_D0_Fecal 3.11070798758 0.000597502699343 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_91_264 2.82626975547 WT_D0_Fecal 2.73947547953 0.000296152580559 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_MOT_168_nov_95_208 2.52199038483 - K_Bacteria.P_Bacteroidota.C_Saprospiria.O_Saprospirales 2.72451628769 KO_D0_Fecal 2.59936450273 0.00043458643533 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus 0.0 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Turicibacteraceae.G_Turicibacter 4.06518031438 cKO_D0_Fecal 3.72686279399 0.0434613048921 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Mesorhizobium.S_multispecies_spp32_5 2.76372697457 KO_D0_Fecal 2.68600833549 5.90584178377e-05 K_Bacteria.P_Acidobacteria.C_Holophagae.O_Holophagales.F_Holophagaceae.G_Holophaga.S_foetida_nov_85_102 3.07074918629 KO_D0_Fecal 2.83077765846 0.000228170667658 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_2_.F_Mollicutes__F_2_.G_Mollicutes__G_2_.S_bacterium_MOT_187_nov_85_747 2.27248193977 - K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae.G_Xanthovirga.S_aplysinae_nov_84_424 0.0 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_89_474 3.1725445375 cKO_D0_Fecal 2.96337286904 0.00742701256165 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 3.42027247443 WT_D0_Fecal 3.17013772413 0.000829900040123 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnoclostridium.S__Clostridium_herbivorans_nov_92_917 3.83871788193 cKO_D0_Fecal 3.52205075407 0.0436987936463 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Hydrogenoanaerobacterium 2.21020509285 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Herbaspirillum 2.66399879318 KO_D0_Fecal 2.57600217423 0.000272463418108 K_Bacteria.P_Actinobacteria.C_Acidimicrobiia.O_Acidimicrobiales.F_Iamiaceae 0.0 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Holdemania 2.99767944346 WT_D0_Fecal 2.742369507 0.000998617163136 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_97_108 2.61988570288 KO_D0_Fecal 2.46987997923 0.00424176237207 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio.S_crossotus_nov_97_108 2.83449462521 WT_D0_Fecal 2.52922690818 0.00315653761611 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_89_796 3.4095058005 WT_D0_Fecal 3.13720222168 0.00088675039411 K_Bacteria.P_Chloroflexi 2.77854292548 KO_D0_Fecal 2.64913562257 5.90584178377e-05 K_Bacteria.P_Bacteroidota.C_Cytophagia 2.74526943804 KO_D0_Fecal 2.57573719108 0.00456725470674 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Eubacteriaceae__XV_.G_Eubacterium.S_ventriosum_nov_97_108 3.32640471516 WT_D0_Fecal 3.04250510506 0.000296152580559 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_muris 3.63954638029 cKO_D0_Fecal 3.36811062679 1.37071112201e-05 K_Bacteria.P_Verrucomicrobia.C_Verrucomicrobiae.O_Verrucomicrobiales.F_Akkermansiaceae 5.37031886628 WT_D0_Fecal 4.9831285231 0.0107923614669 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae 2.74526943804 KO_D0_Fecal 2.57312872743 0.00456725470674 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_multispecies_sppn263_2_nov_96_552 3.08017402102 WT_D0_Fecal 2.81092936204 0.00124069187319 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_89_264 3.15488658468 cKO_D0_Fecal 2.90493164266 0.0436987936463 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Limosilactobacillus.S_reuteri 4.59020189479 cKO_D0_Fecal 4.29756433197 1.37071112201e-05 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Methylocystaceae 2.58000960521 KO_D0_Fecal 2.53689821016 0.00377451735053 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Faecalicatena.S_orotica_nov_92_276 4.27769739369 cKO_D0_Fecal 3.93160801604 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae 4.35168737809 KO_D0_Fecal 4.01648749992 0.00176621459993 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae.G_multigenus.S_multispecies_spp110_18 3.02403435828 KO_D0_Fecal 2.78864642863 0.000912470758618 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae.G_Chryseolinea 2.34181252293 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_multigenus 3.86452052086 WT_D0_Fecal 3.56206793018 0.000556390743148 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_pseudolongum 3.47823286567 WT_D0_Fecal 3.20799515799 0.000608244405018 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_93_333 3.4015938471 WT_D0_Fecal 3.14494405152 0.0013378535981 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_multifamily.G_multigenus.S_multispecies_sppn273_3_nov_96_386 3.03405340104 WT_D0_Fecal 2.7454806511 0.00164441960656 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_ 5.00251430236 WT_D0_Fecal 4.59698957054 0.000801587303532 K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales.F_Anaeroplasmataceae.G_Anaeroplasma 2.61343059387 KO_D0_Fecal 2.39482848633 0.00220937441964 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria 3.95039746771 - K_Bacteria.P_Chloroflexi.C_Anaerolineae 2.77854292548 KO_D0_Fecal 2.64840537371 5.90584178377e-05 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Occallatibacter.S_riparius_nov_82_339 2.66443985201 WT_D0_Fecal 2.4197426512 0.0104275613802 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_90_612 3.71664188719 cKO_D0_Fecal 3.41514048066 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Eubacteriaceae__XV_.G_Eubacterium 3.97042583274 WT_D0_Fecal 3.60905133367 0.000909959353522 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Neglectibacter 3.03677117995 KO_D0_Fecal 2.76665875767 0.00138449861108 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Lawsonibacter.S_asaccharolyticus_nov_95_933 3.16445708769 KO_D0_Fecal 2.95938128892 0.00109586651249 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Myxococcales.F_Polyangiaceae.G_Chondromyces 2.78451152736 KO_D0_Fecal 2.64953319832 4.49246337924e-05 K_Bacteria.P_Bacteroidota.C_Saprospiria.O_Saprospirales.F_Haliscomenobacteraceae 2.72451628769 KO_D0_Fecal 2.60042911664 0.00043458643533 K_Bacteria.P_Acidobacteria.C_Vicinamibacteria 2.85429297521 KO_D0_Fecal 2.64719615321 0.000167206498451 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas 2.46591371671 KO_D0_Fecal 2.35742095371 0.0211845580068 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_MOT_168_nov_97_704 2.98175976711 cKO_D0_Fecal 2.73637670506 0.00108208452825 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 3.21282994803 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales 4.48793539147 KO_D0_Fecal 4.19723044177 0.000231393524299 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Caulobacterales 2.46591371671 KO_D0_Fecal 2.35179920269 0.0211845580068 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster 2.76133162499 KO_D0_Fecal 2.53355171363 0.0288418304195 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales 3.59196344993 WT_D0_Fecal 3.32079805251 0.000661899152667 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_ 4.23544083441 WT_D0_Fecal 3.96912608068 0.00131062434558 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_multigenus 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Rhodoferax 2.62489263988 KO_D0_Fecal 2.74175361446 0.000124178178116 K_Bacteria.P_Bacteroidetes 5.59843832827 WT_D0_Fecal 5.13312293001 0.00303968921712 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Neglectibacter.S_timonensis_nov_97_831 3.03677117995 KO_D0_Fecal 2.76665863993 0.00138449861108 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Carnobacteriaceae__G_1_.S_bacterium_MOT_198 3.31584788812 KO_D0_Fecal 3.05797363963 0.00629788772464 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_449 2.71877256605 KO_D0_Fecal 2.57255322895 0.00138021714543 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Aeromonadales.F_Aeromonadaceae.G_Aeromonas 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_multigenus 3.27864116507 KO_D0_Fecal 3.00545603234 0.000943175411658 K_Bacteria.P_Actinobacteria.C_Actinomycetia 3.81676401052 KO_D0_Fecal 3.53243904738 0.000367478859791 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091_nov_93_285 2.71602878146 KO_D0_Fecal 2.58056774514 0.00135942241508 K_Bacteria.P_Acidobacteria.C_Holophagae 3.07074918629 KO_D0_Fecal 2.83113722436 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerotignum.S_lactatifermentans_nov_97_847 2.32270710301 WT_D0_Fecal 2.31168827055 0.0241559409873 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_multifamily.G_multigenus.S_multispecies_sppn267_3_nov_95_422 2.87306554202 KO_D0_Fecal 2.64516639511 0.00412996825051 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Fulvivirgaceae.G_Chryseolinea.S_soli_nov_95_392 2.34181252293 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelatoclostridium.S__Clostridium_innocuum 2.66473115118 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerotignum 2.32270710301 WT_D0_Fecal 2.31168777147 0.0241559409873 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_putredinis_nov_95_890 3.27977790552 WT_D0_Fecal 2.99800239201 0.000372170326927 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_ 3.52191038561 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Bacillaceae.G_multigenus.S_multispecies_spp99_2 2.62682507338 KO_D0_Fecal 2.47564584169 0.00390165613234 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae 4.04021082769 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_ 3.52191038561 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Paraeggerthella.S_hongkongensis_nov_93_285 2.84243424843 KO_D0_Fecal 2.70746198849 0.00263034118984 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Zoogloeaceae 2.51760919549 KO_D0_Fecal 2.52705535434 0.000610129437371 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_86_061 4.46094618381 cKO_D0_Fecal 4.17518228377 1.37071112201e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sutterellaceae 3.70250429939 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales 4.73462073956 - K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Pseudacidobacterium 2.61218926337 KO_D0_Fecal 2.49320775825 0.000610129437371 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Myxococcales.F_Polyangiaceae.G_Chondromyces.S_lanuginosus_nov_93_636 2.78451152736 KO_D0_Fecal 2.65589888782 4.49246337924e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_ 2.87166176721 WT_D0_Fecal 2.63100959234 0.00119889183954 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales.F_Nitrosomonadaceae.G_Nitrosospira 3.41038580654 KO_D0_Fecal 3.14802804009 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_.S_bacterium_MOT_185 4.38706896094 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerocolumna 2.73713138138 cKO_D0_Fecal 2.69384544479 0.00742701256165 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Blautia.S_multispecies_spp166_3 4.19451817217 KO_D0_Fecal 3.8535411006 0.000829900040123 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae 2.4824873502 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Faecalicatena.S_fissicatena_nov_94_154 3.85427739582 cKO_D0_Fecal 3.53365382241 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruminiclostridium.S_cellulolyticum_nov_89_499 2.68348390461 WT_D0_Fecal 2.54084078227 0.00828893551779 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_ 3.515366398 cKO_D0_Fecal 3.24139045645 0.0477705677895 K_Bacteria.P_Actinobacteria.C_Actinobacteria 3.59196344993 WT_D0_Fecal 3.32079807042 0.000661899152667 K_Bacteria.P_Bacteroidetes.C_Bacteroidia 5.59764379395 WT_D0_Fecal 5.13662261673 0.0023604177411 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sutterellaceae.G_Turicimonas.S_muris 3.54665169637 KO_D0_Fecal 3.16007782591 0.0313663095635 K_Bacteria.P_Acidobacteria.C_Vicinamibacteria.O_Vicinamibacterales.F_Vicinamibacteraceae.G_Luteitalea.S_pratensis_nov_92_135 2.66443703338 KO_D0_Fecal 2.58214968985 0.000124178178116 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotellamassilia.S_timonensis_nov_94_279 3.42027247443 WT_D0_Fecal 3.17013841381 0.000829900040123 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Herminiimonas.S_contaminans 2.67929622548 KO_D0_Fecal 2.62290863749 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_13_ 3.02779057462 cKO_D0_Fecal 2.74499670664 0.00108208452825 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Bacillaceae.G_Priestia.S_multispecies_spp60_2 0.915981693014 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_7_ 3.45467280488 WT_D0_Fecal 3.15355098359 0.000529000490529 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_ 3.515366398 cKO_D0_Fecal 3.28047021931 0.0477705677895 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Culturomica.S_massiliensis_nov_91_055 2.99615772734 WT_D0_Fecal 2.73687985046 0.00020313850589 K_Bacteria.P_Tenericutes.C_Mollicutes 2.61343059387 KO_D0_Fecal 2.39483141956 0.00220937441964 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_94_533 2.6042048508 WT_D0_Fecal 2.79964386659 0.00057274849646 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Azospirillaceae.G_Nitrospirillum.S_amazonense_nov_89_663 2.80487251891 KO_D0_Fecal 2.75260493328 0.00010012050498 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Nevskiales.F_Steroidobacteraceae.G_Povalibacter.S_uvarum_nov_90_971 2.90740498911 KO_D0_Fecal 2.91445591815 4.49246337924e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Immundisolibacterales.F_Immundisolibacteraceae.G_Immundisolibacter.S_cernigliae_nov_92_727 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_amygdalina_nov_96_627 3.39262815502 KO_D0_Fecal 3.14055999794 0.000661899152667 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_ 2.63408541822 KO_D0_Fecal 2.50721583857 0.00808390232469 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_putredinis_nov_97_471 3.67973623667 WT_D0_Fecal 3.38905894983 0.00020313850589 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Mailhella.S_massiliensis_nov_92_081 3.47995148325 KO_D0_Fecal 3.18743968994 0.000332752168841 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_6_.S_bacterium_MOT_153_nov_94_952 3.43469866453 WT_D0_Fecal 3.10013719193 0.00135942241508 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Paraeggerthella.S_hongkongensis_nov_93_510 2.24743535649 KO_D0_Fecal 2.6861832287 0.0213206983823 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales.F_Enterobacteriaceae.G_multigenus.S_multispecies_spp178_5 4.06864792416 KO_D0_Fecal 3.72391976475 0.000177520610365 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Amedibacillus.S_dolichus_nov_92_290 3.02292761701 WT_D0_Fecal 2.73813782237 0.00182063228557 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Millionella.S_massiliensis_nov_87_156 2.82831436714 WT_D0_Fecal 2.65166050546 0.00032033077726 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_ 4.11597289205 cKO_D0_Fecal 3.75367139313 0.00210957176544 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_176_nov_94_523 4.0162410095 cKO_D0_Fecal 3.69503317707 0.0436987936463 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Edaphobacter.S_multispecies_sppn133_2_nov_91_346 2.4443359252 KO_D0_Fecal 2.31662936316 0.00100778542905 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Azospirillaceae 2.80487251891 KO_D0_Fecal 2.74775495222 0.00010012050498 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Gluceribacter 3.40657032198 cKO_D0_Fecal 3.10452701488 0.00742701256165 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae 5.15474260368 cKO_D0_Fecal 4.72187116878 0.00887071390993 K_Bacteria.P_Bacteroidota.C_Flavobacteriia 0.0 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae 4.85523305503 cKO_D0_Fecal 4.55522082299 0.0014102334795 K_Bacteria.P_Deferribacteres.C_Deferribacteres.O_Deferribacterales.F_Mucispirillaceae.G_Mucispirillum.S_schaedleri_nov_96_833 2.76464314985 WT_D0_Fecal 2.44316378113 0.00456622643392 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_indolis_nov_90_625 2.33658599781 KO_D0_Fecal 2.70536253319 0.0355813035824 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Parabacteroides.S_distasonis_nov_97_701 3.08198081713 WT_D0_Fecal 2.8748503877 0.000608244405018 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_93_578 2.87003737036 WT_D0_Fecal 2.76691495737 0.000231393524299 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Eubacteriaceae__XV_ 3.97042583274 WT_D0_Fecal 3.60831236438 0.000909959353522 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Coprococcus 3.13021426522 KO_D0_Fecal 2.88890675993 0.00957835176161 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129 4.53060930794 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotellamassilia 3.42027247443 WT_D0_Fecal 3.17013874148 0.000829900040123 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides 4.06416087686 cKO_D0_Fecal 3.69730695898 0.018542930519 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Aeromonadales.F_Aeromonadaceae 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_ 4.03386591466 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales 3.58109394669 KO_D0_Fecal 3.29431719591 6.13305266025e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_finegoldii_nov_97_241 2.46732865044 WT_D0_Fecal 2.44889811648 0.0130870393125 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_91_650 2.73759018517 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales 3.74982381516 KO_D0_Fecal 3.45991162618 0.000748673899337 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_93_379 2.91208999622 KO_D0_Fecal 2.66256609289 0.00170039397145 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruminiclostridium 3.4459182365 KO_D0_Fecal 3.14172130914 0.00137504128456 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio 3.95039746771 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_2_.F_Mollicutes__F_2_ 2.27248193977 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales 3.36318485309 KO_D0_Fecal 3.09726148754 0.00043458643533 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_90_669 3.56143867518 cKO_D0_Fecal 3.28497184495 0.00742701256165 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_10_.S_bacterium_MOT_175_nov_95_433 3.28144569908 KO_D0_Fecal 3.01874330446 0.000943175411658 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_putredinis_nov_96_782 2.81296134511 KO_D0_Fecal 2.70740211014 0.00105249746183 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Rhodospirillaceae 3.11790235153 KO_D0_Fecal 2.89017282058 5.90584178377e-05 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales 3.43983312732 KO_D0_Fecal 3.18362949659 5.12221886184e-05 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Xanthobacteraceae.G_Pseudolabrys.S_taiwanensis_nov_95_422 2.63644398999 KO_D0_Fecal 2.54691529028 0.00248903033271 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Millionella 3.18537301352 WT_D0_Fecal 2.95074536675 7.1831170041e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Defluviitaleaceae 2.47931150192 WT_D0_Fecal 2.3702305096 0.00858961095159 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Myxococcales 2.78451152736 KO_D0_Fecal 2.65082951512 4.49246337924e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_ 2.99663034138 KO_D0_Fecal 2.75676701981 0.00110422751324 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_multigenus 4.30508890853 KO_D0_Fecal 4.0163915818 0.000231393524299 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella 4.85523305503 cKO_D0_Fecal 4.55522082299 0.0014102334795 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales.F_Enterobacteriaceae.G_Klebsiella.S_pneumoniae 2.02838519894 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_MOT_168 2.55257477291 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales 4.88346298627 cKO_D0_Fecal 4.55342771956 0.0100250665574 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_.S_bacterium_HMT_351_nov_95_400 3.19845867461 cKO_D0_Fecal 2.91937335208 0.00742701256165 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae 3.49750535036 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae.G_multigenus 3.02403435828 KO_D0_Fecal 2.78894447836 0.000912470758618 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_.S_bacterium_MOT_165_nov_94_724 2.93531233114 WT_D0_Fecal 2.70253893242 0.00620319820118 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae 2.98668414399 KO_D0_Fecal 2.81966571328 6.05064446613e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_86_720 3.13126170584 cKO_D0_Fecal 2.90362038667 1.37071112201e-05 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella 3.85481850891 cKO_D0_Fecal 3.52109674345 0.028469650135 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_90_800 3.80981956385 cKO_D0_Fecal 3.47248957927 0.00108208452825 K_Bacteria.P_Acidobacteria.C_Vicinamibacteria.O_Vicinamibacterales.F_Vicinamibacteraceae.G_multigenus 2.4034576175 KO_D0_Fecal 2.39419292837 0.0327958652763 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Hydrogenoanaerobacterium.S_saccharovorans_nov_93_735 2.21020509285 - K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Granulicella.S_acidiphila_nov_83_732 2.1886332089 WT_D0_Fecal 2.54926136782 0.0280921243854 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_multispecies_sppn339_2_nov_96_322 2.48857101731 WT_D0_Fecal 2.42610580796 0.00315653761611 K_Bacteria.P_Actinobacteria.C_Acidimicrobiia.O_Acidimicrobiales.F_Iamiaceae.G_Actinomarinicola 0.0 - K_Bacteria.P_Deferribacteres.C_Deferribacteres.O_Deferribacterales.F_Mucispirillaceae 2.95701882868 WT_D0_Fecal 2.63649710614 0.00471064255506 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_874 3.67226895132 WT_D0_Fecal 3.38540547899 0.000773153375936 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales.F_Granulosicoccaceae.G_Sulfuriflexus 2.47550290291 KO_D0_Fecal 2.75790620134 0.000272463418108 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia 3.38882437178 KO_D0_Fecal 3.10560170207 0.00127809561979 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Faecalibaculum.S_rodentium 3.13714079213 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Nevskiales.F_Steroidobacteraceae.G_Povalibacter.S_uvarum_nov_90_909 3.28850133104 KO_D0_Fecal 3.03317461162 0.00010012050498 K_Bacteria.P_Rhodothermaeota.C_Rhodothermia 2.5474436293 KO_D0_Fecal 2.56487255356 0.00558932611073 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Muricomes 2.49937273675 KO_D0_Fecal 2.55361215442 0.0144895203506 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_9_.S_bacterium_MOT_174_nov_95_673 3.26300726638 WT_D0_Fecal 2.98853561599 0.00127809561979 K_Bacteria.P_Deferribacteres.C_Deferribacteres 2.95701882868 WT_D0_Fecal 2.63649571558 0.00471064255506 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Longibaculum.S_muris_nov_92_308 3.12736230344 WT_D0_Fecal 2.92097666764 0.000762786707675 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Sphaerotilaceae.G_Piscinibacter.S_defluvii_nov_97_500 2.72747601212 KO_D0_Fecal 2.68381636443 2.83312615254e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_3_.S_bacterium_MOT_150 3.57669542353 WT_D0_Fecal 3.21665088981 0.0272327950024 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Hyphomicrobiaceae 2.78248826046 KO_D0_Fecal 2.66300845295 0.000127801500629 K_Bacteria.P_Acidobacteria.C_Vicinamibacteria.O_Vicinamibacterales.F_Vicinamibacteraceae.G_Luteitalea 2.66443703338 KO_D0_Fecal 2.5821420619 0.000124178178116 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria 4.41097861944 KO_D0_Fecal 3.9698253906 0.00630182083026 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_2_ 4.01995563169 WT_D0_Fecal 3.66434387597 0.00550811938624 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Thermomarinilinea 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Limosilactobacillus 4.59020189479 cKO_D0_Fecal 4.29756431158 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_.S_bacterium_MOT_171_nov_95_188 3.29214517371 cKO_D0_Fecal 2.97811560825 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_7_.S_bacterium_MOT_172_nov_91_925 3.59879346739 cKO_D0_Fecal 3.27170565236 1.37071112201e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_90_283 3.12908989529 cKO_D0_Fecal 2.92138792825 0.00742701256165 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Caproiciproducens 2.28283905969 KO_D0_Fecal 2.45419207926 0.0144048927813 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum 4.76348279398 WT_D0_Fecal 4.43910037203 5.77209486346e-05 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_fairfieldensis_nov_89_379 3.95039746771 cKO_D0_Fecal 3.67157635213 1.37071112201e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Limnobacter.S_humi 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora 3.6297178195 - K_Bacteria.P_Acidobacteria.C_Vicinamibacteria.O_Vicinamibacterales.F_Vicinamibacteraceae.G_multigenus.S_multispecies_sppn112_2_nov_92_971 2.4034576175 KO_D0_Fecal 2.39449265856 0.0327958652763 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales.F_Nitrosomonadaceae.G_Nitrosospira.S_multiformis_nov_93_864 3.41038580654 KO_D0_Fecal 3.14758443621 6.05064446613e-05 K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Spirosomaceae.G_Flectobacillus.S_roseus 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae 3.02403435828 KO_D0_Fecal 2.78812763724 0.000912470758618 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Oxalobacteraceae.G_Collimonas.S_fungivorans_nov_92_273 2.75587784925 KO_D0_Fecal 2.72766113083 0.000124178178116 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Holdemania.S_massiliensis_nov_92_483 2.99767944346 WT_D0_Fecal 2.74237016461 0.000998617163136 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Lawsonibacter.S_asaccharolyticus_nov_97_362 2.00594233694 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruthenibacterium 2.71699991877 KO_D0_Fecal 2.59855703255 0.003711578293 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Culturomica 2.99615772734 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales 0.0 - K_Bacteria.P_Nitrospirae.C_Nitrospira.O_Nitrospirales.F_Nitrospiraceae.G_Nitrospira 2.78485434448 KO_D0_Fecal 2.68180317401 0.00165724014076 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Acidobacteriales.F_Acidobacteriaceae.G_Pseudacidobacterium.S_ailaaui_nov_93_269 2.61218926337 KO_D0_Fecal 2.4998190935 0.000610129437371 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Anaeromassilibacillus 2.41641575829 WT_D0_Fecal 2.42272323218 0.00490618801731 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Methylobacteriaceae.G_Methylorubrum 0.0 - K_Bacteria.P_Actinobacteria.C_Acidimicrobiia.O_Acidimicrobiales.F_Iamiaceae.G_Actinomarinicola.S_tropica_nov_91_607 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_4_.S_bacterium_MOT_151_nov_91_647 2.64513240225 WT_D0_Fecal 2.65619961062 0.00110422751324 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas.S_lenta 2.46591371671 KO_D0_Fecal 2.35322387642 0.0211845580068 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerotaenia.S_torta_nov_97_108 3.27085492857 WT_D0_Fecal 2.9990919423 0.00020313850589 K_Bacteria.P_Deferribacteres.C_Deferribacteres.O_Deferribacterales.F_Mucispirillaceae.G_Mucispirillum.S_schaedleri_nov_97_500 2.55015978213 KO_D0_Fecal 2.37660611998 0.00580585948896 K_Bacteria.P_Firmicutes.C_multiclass.O_multiorder 3.60280576447 WT_D0_Fecal 3.31418989968 0.000332752168841 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Aggregatilineales 2.77854292548 KO_D0_Fecal 2.64763309084 5.90584178377e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae 3.05593538214 KO_D0_Fecal 2.85610209321 7.80329918658e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_87_443 4.45985945007 WT_D0_Fecal 4.17206686036 3.58645365907e-05 K_Bacteria.P_Firmicutes.C_Mollicutes 2.64937875602 WT_D0_Fecal 2.63950341575 0.00277456004515 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas 2.98668414399 KO_D0_Fecal 2.81508781463 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Desulfotomaculaceae.G_Pelotomaculum 2.40659895393 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Xanthomonadales 2.69677444139 KO_D0_Fecal 2.61983129786 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_1_.S_bacterium_MOT_147_nov_96_466 1.8394939537 - K_Bacteria.P_Bacteroidetes.C_Sphingobacteriia.O_Sphingobacteriales.F_Sphingobacteriaceae 2.38656235524 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas.S_sediminicola 2.58283316514 KO_D0_Fecal 2.50856751599 0.00315653761611 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Coprococcus.S_catus_nov_95_192 3.13021426522 KO_D0_Fecal 2.8889076052 0.00957835176161 K_Bacteria.P_Verrucomicrobia.C_Verrucomicrobiae 5.37031886628 WT_D0_Fecal 4.9831285231 0.0107923614669 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_906 3.2004336698 WT_D0_Fecal 2.97690792063 3.58645365907e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_91_284 4.30868595548 WT_D0_Fecal 4.02598964702 0.000506637281361 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae.G_Helicobacter 4.41097861944 KO_D0_Fecal 3.9698253906 0.00630182083026 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_muris_nov_94_952 2.0945585574 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Muricomes.S_intestini_nov_97_831 2.49937273675 KO_D0_Fecal 2.55361217258 0.0144895203506 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 4.32236338344 WT_D0_Fecal 4.00025384549 0.000286094067045 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_multigenus.S_multispecies_sppn18_2_nov_92_677 3.86452052086 WT_D0_Fecal 3.5620681531 0.000556390743148 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales 2.47550290291 KO_D0_Fecal 2.7577024876 0.000272463418108 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus.S_multispecies_spp102_3 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Harryflintia 2.1176243226 - K_Bacteria.P_Acidobacteria.C_Holophagae.O_Holophagales.F_Holophagaceae.G_Holophaga 3.07074918629 KO_D0_Fecal 2.83080143062 0.000228170667658 K_Bacteria.P_Nitrospirae.C_Nitrospira 2.78485434448 KO_D0_Fecal 2.68157102959 0.00165724014076 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_7_ 3.59879346739 cKO_D0_Fecal 3.27170575734 1.37071112201e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_12_.S_bacterium_MOT_179 3.10620348636 KO_D0_Fecal 2.90146967384 0.00424176237207 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_ 5.20835921372 WT_D0_Fecal 4.65568157858 0.0316531798366 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_ 2.87166176721 WT_D0_Fecal 2.63100995736 0.00119889183954 K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Bryobacterales.F_Bryobacteraceae.G_Paludibaculum.S_fermentans_nov_92_048 3.0741430692 KO_D0_Fecal 2.90815686195 5.90584178377e-05 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_multispecies_sppn274_2_nov_91_966 3.85481850891 cKO_D0_Fecal 3.58128184217 1.37071112201e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Tidjanibacter.S_massiliensis_nov_88_776 2.98025945038 cKO_D0_Fecal 2.76159308019 0.00108208452825 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_89_069 3.92295524388 cKO_D0_Fecal 3.64848759055 0.000133365938175 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Parabacteroides.S_merdae_nov_93_265 3.44389039873 cKO_D0_Fecal 3.17924002081 1.37071112201e-05 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Kiloniellaceae.G_Aestuariispira 2.47353177213 KO_D0_Fecal 2.58538934527 0.00491670185215 K_Bacteria.P_Acidobacteria.C_Vicinamibacteria.O_Vicinamibacterales.F_Vicinamibacteraceae 2.85429297521 KO_D0_Fecal 2.64743257291 0.000167206498451 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruthenibacterium.S_lactatiformans_nov_97_590 2.54211886404 KO_D0_Fecal 2.60990919641 0.00176686997579 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Paraburkholderia 3.099996823 KO_D0_Fecal 2.87643406554 0.000345026989616 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales 4.16102831878 KO_D0_Fecal 3.76050824229 0.00132987986663 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales 0.0 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_multispecies_spp44_2 2.95443137174 WT_D0_Fecal 2.72749346681 0.02297295786 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae.G_Pseudomonas.S_multispecies_spp58_3 2.64031413544 KO_D0_Fecal 2.71932973692 4.49246337924e-05 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Nevskiales.F_Steroidobacteraceae.G_Povalibacter.S_uvarum_nov_94_104 2.65188240714 KO_D0_Fecal 2.78904368584 5.90584178377e-05 K_Bacteria.P_Bacteroidetes.C_Sphingobacteriia 2.38656235524 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruthenibacterium.S_lactatiformans 2.23744809109 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Paenibacillus.S_aurantiacus_nov_97_052 2.92230993382 KO_D0_Fecal 2.71709646324 0.000124178178116 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_fairfieldensis_nov_95_000 3.58757497035 WT_D0_Fecal 3.26385302641 0.00131062434558 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Micropepsales.F_Micropepsaceae 3.23717220634 KO_D0_Fecal 2.9784837905 7.80329918658e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Clostridium.S_multispecies_spp209_2 2.74286671995 KO_D0_Fecal 2.59640834386 0.000228170667658 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Immundisolibacterales.F_Immundisolibacteraceae 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria 4.08373724336 KO_D0_Fecal 3.79169873675 3.58645365907e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Harryflintia.S_acetispora_nov_93_079 2.1176243226 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Hyphomicrobiaceae.G_Hyphomicrobium 2.78248826046 KO_D0_Fecal 2.66274249798 0.000127801500629 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Micropepsales.F_Micropepsaceae.G_Rhizomicrobium 3.23717220634 KO_D0_Fecal 2.97805481552 7.80329918658e-05 K_Bacteria.P_Bacteroidetes.C_Sphingobacteriia.O_Sphingobacteriales.F_Sphingobacteriaceae.G_Pedobacter.S_duraquae 2.38656235524 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_94_483 3.39416523123 WT_D0_Fecal 3.1158174055 0.000829900040123 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_ 3.52191038561 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_mucosicola 3.19818749873 cKO_D0_Fecal 2.87235879879 0.0476656643063 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Faecalibaculum 3.13714079213 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Desulfotomaculaceae.G_Pelotomaculum.S_terephthalicicum_nov_86_667 2.40659895393 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri 3.51258623635 cKO_D0_Fecal 3.22505781541 0.000538410569182 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Oscillospiraceae__G_4_.S_bacterium_MOT_151_nov_97_847 2.83750754411 WT_D0_Fecal 2.6326251749 0.00707495370179 K_Bacteria.P_Deferribacteres.C_Deferribacteres.O_Deferribacterales 2.95701882868 WT_D0_Fecal 2.63649486139 0.00471064255506 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_97_837 3.3745088475 WT_D0_Fecal 3.10166745955 0.00119889183954 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Defluviitaleaceae.G_Defluviitalea 2.47931150192 WT_D0_Fecal 2.37024016915 0.00858961095159 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides_nov_97_115 3.59101443112 KO_D0_Fecal 3.34822677356 0.0018741658351 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Paraburkholderia.S_hospita_nov_91_667 3.099996823 KO_D0_Fecal 2.87633257945 0.000345026989616 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Immundisolibacterales.F_Immundisolibacteraceae.G_Immundisolibacter 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_436_nov_86_585 2.98013567592 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Clostridium 4.04021082769 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Paenibacillus.S_endophyticus 2.82108688292 KO_D0_Fecal 2.69657942928 0.00183890057713 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnoclostridium.S__Clostridium_populeti_nov_96_386 2.21641071393 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Parabacteroides.S_distasonis_nov_97_732 3.4954134463 cKO_D0_Fecal 3.20210446772 1.37071112201e-05 K_Bacteria.P_Acidobacteria.C_Holophagae.O_Holophagales.F_Holophagaceae 3.07074918629 KO_D0_Fecal 2.83081003159 0.000228170667658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Lawsonibacter.S_asaccharolyticus 2.97149195959 KO_D0_Fecal 2.75957959732 0.00139143323299 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Kineosporiales.F_Kineosporiaceae.G_multigenus 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales 3.51187722139 KO_D0_Fecal 3.23753040591 7.80329918658e-05 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_multigenus 3.71597661858 KO_D0_Fecal 3.42915778135 0.000748673899337 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes.S_putredinis 2.19480681473 KO_D0_Fecal 2.42686275941 0.0211845580068 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_EubacterialesFamilyXIII_IncertaeSedis.G_Aminipila.S_butyrica_nov_91_627 3.12562574283 KO_D0_Fecal 2.90389852825 0.00127809561979 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_4_.S_bacterium_MOT_165_nov_97_356 2.77326332742 WT_D0_Fecal 2.61405848316 0.0115933075423 K_Bacteria.P_Firmicutes.C_Bacilli 5.15505223983 cKO_D0_Fecal 4.67532535916 0.0182242892587 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnoclostridium.S__Clostridium_scindens 3.31867182057 KO_D0_Fecal 3.09023118705 0.0013378535981 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Adlercreutzia.S_caecimuris_nov_92_291 2.81013849988 cKO_D0_Fecal 2.62399965761 0.00108208452825 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_90_816 3.77200804597 cKO_D0_Fecal 3.51486056671 0.00108208452825 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Blautia 4.19451817217 KO_D0_Fecal 3.85354115611 0.000829900040123 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae 3.59196344993 WT_D0_Fecal 3.32079796278 0.000661899152667 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_220 3.56888937034 KO_D0_Fecal 3.29651334391 0.00124069187319 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_2_ 2.27248193977 - K_Bacteria.P_Acidobacteria.C_Acidobacteriia.O_Bryobacterales.F_Bryobacteraceae.G_Paludibaculum.S_fermentans_nov_93_780 2.81807099148 KO_D0_Fecal 2.7442387333 0.000129940032811 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_shahii_nov_87_398 3.17404877204 cKO_D0_Fecal 3.20720900879 0.00742701256165 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Methylobacteriaceae.G_Methylorubrum.S_multispecies_spp188_9 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Alistipes 4.26962511586 WT_D0_Fecal 3.95306665569 0.000798040302698 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_6_.S_bacterium_MOT_171_nov_94_759 3.37634604817 cKO_D0_Fecal 3.09665474315 0.000133365938175 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_10_ 3.65800566188 KO_D0_Fecal 3.31572953194 0.00565102539954 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales 3.87286523975 cKO_D0_Fecal 3.5273978666 0.0336329176377 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix 4.12159873045 KO_D0_Fecal 3.85051716437 0.000661899152667 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Culturomica.S_massiliensis_nov_89_613 2.89925176744 cKO_D0_Fecal 2.68736905102 0.00742701256165 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Microbacteriaceae 2.62474851699 KO_D0_Fecal 2.4651459868 0.0133223527763 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Nocardioidaceae 0.0 - K_Bacteria.P_Verrucomicrobia.C_Verrucomicrobiae.O_Verrucomicrobiales 5.37031886628 WT_D0_Fecal 4.9831285231 0.0107923614669 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales 5.58265290922 - K_Bacteria.P_Verrucomicrobia 5.37031886628 WT_D0_Fecal 4.9831285231 0.0107923614669 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_89_431 4.50681855041 cKO_D0_Fecal 4.24780484157 0.000133365938175 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Hungatella.S_multispecies_spp2_2 2.59523448672 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria 4.67950176981 KO_D0_Fecal 4.37534348088 9.89075973966e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_92_874 3.2361888921 WT_D0_Fecal 3.0113702636 0.000262376916132 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Clostridiaceae.G_Clostridium.S_multispecies_spp65_2 3.68982700729 KO_D0_Fecal 3.53602286602 0.000372170326927 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae 3.34719220552 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Anaerotaenia 3.52906174036 KO_D0_Fecal 3.23430345555 0.00127809561979 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Parvibaculaceae.G_Rhodoligotrophos.S_multispecies_sppn41_2_nov_79_157 2.21236778218 WT_D0_Fecal 2.59040028957 0.0309734620672 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Enterobacterales.F_Enterobacteriaceae 4.07620989014 KO_D0_Fecal 3.73231366132 0.000296152580559 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Amedibacillus.S_dolichus_nov_92_081 2.17988298411 KO_D0_Fecal 2.45372914722 0.022557612377 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Mesorhizobium 2.76372697457 KO_D0_Fecal 2.68555856333 5.90584178377e-05 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_2_.F_Mollicutes__F_2_.G_Mollicutes__G_2_ 2.27248193977 - K_Bacteria.P_Bacteroidota.C_Cytophagia.O_Cytophagales.F_Spirosomaceae.G_Flectobacillus 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_93_789 3.36211819283 cKO_D0_Fecal 3.20970874728 0.0436987936463 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_ 3.52191038561 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Ruminococcus 3.52466468399 KO_D0_Fecal 3.24708628635 0.000459229595502 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomonadales.F_Hyphomonadaceae.G_Vitreimonas.S_flagellata_nov_93_990 2.75914738956 KO_D0_Fecal 2.57335323417 0.000124178178116 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Rhizobiaceae.G_Rhizobium.S_multispecies_spp94_2 1.51896746189 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Kineosporiales 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_multifamily.G_multigenus 3.2399081784 WT_D0_Fecal 2.95601204648 0.0023745460248 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia.S_faecis_nov_94_231 2.22836538855 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ramlibacter 3.6221572465 KO_D0_Fecal 3.33653015166 0.00010012050498 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Micropepsales 3.23717220634 KO_D0_Fecal 2.97908133635 7.80329918658e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_.S_bacterium_MOT_184_nov_94_820 3.27876403699 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Micropepsales.F_Micropepsaceae.G_Rhizomicrobium.S_electricum_nov_93_012 3.23717220634 KO_D0_Fecal 2.97893102115 7.80329918658e-05 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales 2.51760919549 KO_D0_Fecal 2.53318946438 0.000610129437371 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_bacterium_MOT_159 4.01676301787 KO_D0_Fecal 3.77067982149 0.00127809561979 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae 3.73571543167 KO_D0_Fecal 3.44963226518 0.00010012050498 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales 4.41097861944 KO_D0_Fecal 3.9698253906 0.00630182083026 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_ 2.99663034138 KO_D0_Fecal 2.75676609934 0.00110422751324 K_Bacteria.P_Actinobacteria.C_Coriobacteriia 4.40788602483 cKO_D0_Fecal 4.05286338004 0.00186095279569 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Nevskiales.F_Steroidobacteraceae 3.50511464886 KO_D0_Fecal 3.23555265328 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Anaerotruncus.S_colihominis_nov_95_904 2.338483458 - K_Bacteria.P_Nitrospirae.C_Nitrospira.O_Nitrospirales 2.78485434448 KO_D0_Fecal 2.68127348761 0.00165724014076 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_3_.S_bacterium_MOT_163_nov_81_065 2.33841086479 cKO_D0_Fecal 2.73593624983 0.00742701256165 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculum.S_intestinale_nov_92_220 4.02219826124 WT_D0_Fecal 3.73232546724 6.07963908089e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales 5.19190414035 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriales__F_1_.G_Eubacteriales__G_1_.S_multispecies_sppn236_2_nov_97_837 3.13448095155 KO_D0_Fecal 2.89795350235 0.0162201739899 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_94_050 4.65101942756 WT_D0_Fecal 4.35083583114 5.12221886184e-05 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 4.06416087686 cKO_D0_Fecal 3.69730695898 0.018542930519 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae 4.48793539147 KO_D0_Fecal 4.19723056872 0.000231393524299 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus.S_intestinalis 4.55470619563 cKO_D0_Fecal 4.23404441732 0.0108863017529 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales 3.21412840686 KO_D0_Fecal 2.95630279707 0.000127801500629 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae 3.31584788812 KO_D0_Fecal 3.05797372608 0.00629788772464 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Xanthobacteraceae.G_Pseudolabrys.S_taiwanensis_nov_95_673 2.69097663271 KO_D0_Fecal 2.92453382506 0.000345026989616 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae 2.46591371671 KO_D0_Fecal 2.35518607393 0.0211845580068 K_Bacteria.P_Rhodothermaeota.C_Rhodothermia.O_Rhodothermales.F_Salisaetaceae.G_Roseithermus 2.5474436293 KO_D0_Fecal 2.56457577611 0.00558932611073 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Duncaniella.S_freteri_nov_93_293 3.53203225319 cKO_D0_Fecal 3.26975128979 0.000133365938175 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Phocaeicola 3.21282994803 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_2_.S_bacterium_MOT_104_nov_92_644 3.59115552696 KO_D0_Fecal 3.30856530308 0.00124069187319 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Kineothrix.S_alysoides 2.37926298867 - K_Bacteria.P_Tenericutes 2.61343059387 KO_D0_Fecal 2.39483103337 0.00220937441964 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Rikenellaceae.G_Tidjanibacter 2.98025945038 cKO_D0_Fecal 2.76159250582 0.00108208452825 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhodospirillales.F_Azospirillaceae.G_Nitrospirillum 2.80487251891 KO_D0_Fecal 2.73910067968 0.00010012050498 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Eisenbergiella.S_massiliensis_nov_94_286 1.87189199437 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales.F_Thioalkalispiraceae 0.0 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Aggregatilineales.F_Aggregatilineaceae.G_Aggregatilinea 2.77854292548 KO_D0_Fecal 2.6487630092 5.90584178377e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_11_.S_bacterium_MOT_177_nov_97_608 2.79363047802 KO_D0_Fecal 2.58486924131 0.0127134923027 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Methylocystaceae.G_Methylocystis.S_multispecies_sppn59_2_nov_97_590 2.58000960521 KO_D0_Fecal 2.52107319123 0.00377451735053 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_436_nov_85_540 2.77856288228 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_multigenus.S_multispecies_spp122_2 4.30508890853 KO_D0_Fecal 4.01639160423 0.000231393524299 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_.S_bacterium_HMT_351_nov_97_122 3.52191038561 WT_D0_Fecal 3.25107156877 0.000459229595502 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales.F_Thioalkalispiraceae.G_Thiohalophilus.S_thiocyanatoxydans_nov_92_986 0.0 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae 2.97162640275 KO_D0_Fecal 2.75437456764 0.0200631318542 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae 5.51518151208 WT_D0_Fecal 5.05010283213 0.00414162661281 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Hyphomicrobiales.F_Parvibaculaceae.G_Rhodoligotrophos 2.21236778218 WT_D0_Fecal 2.59040180886 0.0309734620672 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacter.S_splanchnicus_nov_92_184 2.61344627009 WT_D0_Fecal 2.77843694261 0.000296152580559 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae 3.71597661858 KO_D0_Fecal 3.42915659126 0.000748673899337 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Defluviitaleaceae.G_Defluviitalea.S_multispecies_sppn26_2_nov_87_828 2.47931150192 WT_D0_Fecal 2.37023795915 0.00858961095159 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Chromatiales.F_Granulosicoccaceae 2.47550290291 KO_D0_Fecal 2.75703851401 0.000272463418108 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Nitrosomonadales.F_Nitrosomonadaceae 3.41038580654 KO_D0_Fecal 3.14709610645 6.05064446613e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Papillibacter 1.97063115158 -