K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Bulleidia.S_extructa 2.6450738766 RA_Stage_III_IV 2.41429318849 0.0104503702504 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae 2.93559448934 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_nigrescens 4.18769052133 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia 2.78538453311 RA_Stage_III_IV 2.28101308992 0.000418696762725 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_ 2.27655327952 0.0225036981242 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_481 2.55300378348 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae.G_Propionivibrio.S_dicarboxylicus_nov_93_802 2.84401351019 - K_Bacteria.P_Proteobacteria 5.37674162941 RA_Stage_I_II 4.80122140615 0.0251232093456 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__animalis 4.14466363952 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_anginosus 3.72150538641 RA_Stage_III_IV 3.38490261079 0.0393556392579 K_Bacteria.P_Chloroflexi 2.55056368781 RA_Stage_III_IV 2.17015422947 0.000884946731777 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_423 4.41059656739 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_mirabilis 4.38581035937 RA_Healthy_Gingivitis 3.90615151205 0.015864872292 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_268 2.44448407423 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_ 2.56911607223 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales 3.94547892919 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_263 2.40731589397 RA_Stage_I_II 2.40122414512 3.18757537723e-06 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_262 2.39828032115 RA_Stage_III_IV 2.13412495126 0.000100024228667 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor 3.67613454312 RA_Stage_III_IV 3.35879575382 4.4564198823e-06 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales 4.94156908813 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_diversum 3.0186371303 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae 2.84401351019 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales 4.66663426528 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia.S_exigua 2.55153216808 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_longum 0.910636959904 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus 3.1960681589 RA_Stage_I_II 2.80313443643 0.0288897327948 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae 2.2446672446 0.00302656073493 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_507 2.46595020133 RA_Stage_I_II 2.31116631318 0.000231505139543 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_505 1.94794505322 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii 4.64366190476 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_multispecies_spp40_2 2.4660099085 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium 2.88207246732 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella 3.48185122463 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_ 4.11230593788 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_957 2.84310266221 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_149 2.43005540451 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales 2.84401351019 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae 5.33419066592 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_178 3.18816907252 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_146 2.19060205038 0.00669299112334 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_513 2.77040921912 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae 2.17829159965 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia 4.75300016514 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_448 4.7408701366 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella 3.29157914612 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae 4.39092021678 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae 4.75811561469 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus.S_geminatus 3.1960681589 RA_Stage_I_II 2.80315436736 0.0288897327948 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_ 2.59051395542 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_gulae 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mitis 3.95667861669 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis 3.23247481744 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae 2.77187582274 RA_Healthy_Gingivitis 2.39926037438 0.0477903256111 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_dianae 2.86471911583 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus 2.81587971227 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum 3.77738026279 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae 2.75295056118 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_tannerae 4.11580622772 RA_Stage_III_IV 3.79384987344 0.0293800281763 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp25_2 2.12240258865 - K_Bacteria.P_Synergistetes 3.90036656187 RA_Stage_III_IV 3.55700299049 0.0415832125616 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfomicrobiaceae 2.33162659705 RA_Stage_I_II 2.34087553559 3.18757537723e-06 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_gingivalis 3.9209656785 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_medium 1.302344008 RA_Stage_I_II 2.15208607937 0.0264073055077 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_parainfluenzae 4.28404075197 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_918_nov_96_154 3.08433086461 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae 4.26992802843 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_.G_Bacteroidetes__G_6_ 2.3448699594 RA_Stage_III_IV 2.32488346288 0.0264073055077 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Caproiciproducens 2.72725540346 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_919_nov_97_426 1.90831953284 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales 5.21878861671 - K_Bacteria.P_Synergistetes.C_Synergistia 3.90036656187 RA_Stage_III_IV 3.55816591977 0.0415832125616 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_ 2.3448699594 RA_Stage_III_IV 2.56765338005 0.0264073055077 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_rimae 3.6400665675 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus 5.17734087034 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__dentisani_clade_058 3.19122381051 RA_Healthy_Gingivitis 2.72216725191 0.020018873981 K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae.G_Soehngenia 1.90640779789 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus.S_sp__HMT_041 3.19804324448 RA_Stage_III_IV 2.88582232501 0.00678945236741 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_.S_bacterium_MOT_182_nov_92_918 2.63246550912 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_pasteri 3.57612555336 RA_Stage_I_II 3.29966769054 0.0150754740665 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_ 3.70324856312 RA_Stage_I_II 3.27462897291 0.0198140085184 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_110 3.42733188031 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284 2.62320306383 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales 2.2446672446 RA_Stage_I_II 2.01744490559 0.00302656073493 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis 3.56666459333 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sinus 2.66571010022 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga 4.62264023345 RA_Stage_I_II 4.13095375864 0.0399389094658 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S__Eubacterium_yurii 2.34405276513 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_parvula 4.00997253549 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_286 3.22446015621 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_145 2.18136957549 0.000885449981224 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella 3.87526820416 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae 4.00816304714 RA_Healthy_Gingivitis 3.58542910798 0.00292756768788 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae 2.99052348697 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_.S_bacterium_HMT_093 1.97490934158 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfomicrobiaceae.G_Desulfomicrobium.S_orale 2.33162659705 RA_Stage_I_II 2.2897832323 3.18757537723e-06 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_ 3.06726627742 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_sp__HMT_123 2.60493432317 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales 4.96878247622 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_3_ 1.21166695557 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium 3.90036656187 RA_Stage_III_IV 3.55759697106 0.0415832125616 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_242_nov_97_769 1.86023122462 RA_Stage_III_IV 2.16571091112 0.000231505139543 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_292 3.20843233678 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia 4.02537542003 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sputigena 3.71619156405 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus 3.25441488664 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroidaceae__G_1_ 1.96403011951 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas 4.26992802843 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales 4.75811561469 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales 4.63694270378 RA_Stage_I_II 4.1311799293 0.0377052404106 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_ 2.81817476225 RA_Stage_I_II 2.53519430106 0.000149147773412 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_hwasookii 2.85286720139 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_14_.S_bacterium_MOT_183_nov_94_635 2.86836056821 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae 3.57095721302 RA_Healthy_Gingivitis 3.23105774008 0.0252720708214 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_97_211 2.78565148386 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_ 2.73996274087 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales 1.90640779789 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_902 4.32213795484 RA_Stage_I_II 3.94484371681 0.00117697381167 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sanguinis_nov_97_782 3.3620239188 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sobrinus 4.07943311449 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_showae 2.97042159841 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae 3.02213920567 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae 3.68675236626 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_multispecies_spp22_2 2.82808145171 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae 2.45276438456 0.00039426088278 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_dentalis 3.41350528884 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_rectus_nov_97_826 2.41873261201 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_.S_bacterium_HMT_905 2.27655327952 0.0225036981242 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_ 3.20391557534 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169_nov_97_951 3.1133785308 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_concisus 3.09160521359 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091 2.31807125444 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_ 2.84728931043 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_85_685 2.56727761303 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma 2.2446672446 RA_Stage_I_II 2.02388167993 0.00302656073493 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_sp__HMT_807 3.72886986731 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_ 1.11006928609 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia 3.02213920567 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_johnsonii 4.01492775945 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales 4.39092021678 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_237 3.12432943104 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_234 2.13456013761 0.000835566399352 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales 3.63150105341 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_230 2.30785940888 RA_Stage_I_II 2.22454367782 0.000115005902975 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_231 3.18241287911 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_238 2.21524031512 RA_Stage_III_IV 2.13140889923 7.42126089421e-06 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_237_nov_97_566 2.45813525618 RA_Stage_III_IV 2.51425255952 0.000231505139543 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171_nov_96_421 2.95533155761 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_rectus 2.40692783383 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_odontolytica 3.29620892756 - K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales.F_Anaeroplasmataceae.G_Anaeroplasma 3.01962512845 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_.S_bacterium_HMT_439 2.55056368781 RA_Stage_III_IV 2.13346844791 0.000884946731777 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_multispecies_spp41_2 3.2080340542 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae 4.56703515134 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__nodatum 2.8517302419 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella 3.43715694738 RA_Healthy_Gingivitis 3.05820634906 0.0138160906241 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales 3.02213920567 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria 3.38737941522 RA_Stage_III_IV 3.07808487651 0.00946835971644 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria 4.42587504152 RA_Healthy_Gingivitis 4.01915351354 0.00357351051789 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sputigena 3.8729290776 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pallens 2.70948382331 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces 5.33419066592 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales 4.8188629713 - K_Bacteria.P_Firmicutes.C_Tissierellia 1.90640779789 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae 3.42281648775 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_wadei 4.34719314737 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_spp49_2 2.57107517885 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_periodonticum 3.31847252219 RA_Stage_I_II 3.01374616829 0.00383184672246 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_755 3.307093717 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_endodontalis 3.8153810078 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis 4.22308092093 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilaceae__G_1_ 0.764508924225 RA_Stage_I_II 2.7031152224 0.00193045413623 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_bacilliformis 3.48630879989 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae.G_Propionivibrio 2.84401351019 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_sppn6_3_nov_97_845 2.7408002006 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_96_634 2.89021533079 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_denticola 3.60729656839 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_ 4.11230593788 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_280 1.66545544777 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_317 4.31413001733 RA_Stage_I_II 3.87178108516 0.0133039309095 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_314 3.22415500278 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia 3.99762969589 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_perflava 3.93964337204 RA_Healthy_Gingivitis 3.59396740191 0.0168904833635 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_serpentiformis 2.80900029952 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas 4.27225927552 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_ 4.00730885718 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria 5.29001765875 RA_Stage_I_II 4.82085032163 0.00444066509555 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_.S_bacterium_HMT_351 3.81841913872 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169_nov_97_988 1.32419781556 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_525 3.59638662921 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter 4.00969810163 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oralis 3.24638863304 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_intermedia 3.45711579966 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_sanguinis 2.65742851796 RA_Healthy_Gingivitis 2.30435206445 0.0129954814963 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae 4.34421330362 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__vincentii 4.39173353631 RA_Stage_III_IV 4.02953825701 0.00305558561401 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_ 2.78626895457 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_365 2.13520401511 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_458 3.57335309945 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae 5.17734087034 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_segnis 3.29677655849 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium 4.6537723858 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_gerencseriae 4.77998572777 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix 2.96764332922 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_gracilis 3.95519089681 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_498 3.70030796301 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_longum 2.94492176341 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis 3.65058438967 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_morbillorum 3.48986490093 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi 2.77187582274 RA_Healthy_Gingivitis 2.3804769743 0.0477903256111 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae 4.00969810163 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae 4.53512700563 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_.S_bacterium_HMT_500 2.75930755422 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_saburreum 3.47009585032 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum 3.65481741455 RA_Healthy_Gingivitis 3.30301422203 0.0468565660721 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia.S_sanguinegens_nov_90_792 2.78538453311 RA_Stage_III_IV 2.40650835134 0.000418696762725 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_292_nov_97_755 2.04983157446 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_96_825 3.63320613251 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus 3.47913494772 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella 2.88765679237 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella 3.94473231165 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema 4.01766069839 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum 4.81448813689 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_maculosa 3.16212363145 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia 2.93532729134 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_168 2.27047694829 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_denitrificans 3.41176214629 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_155 3.43547015132 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_764 2.47970130888 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia 4.94156908813 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_167 2.90539115158 RA_Stage_III_IV 2.436518165 0.0368512069971 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_150 2.63557578147 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_georgiae 3.46022098471 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_fastidiosum 3.42973334418 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus 4.28835830348 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_359 2.65211355743 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis_nov_97_342 3.26923447446 RA_Stage_III_IV 3.10133257063 0.00461578107048 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_170 4.32139302777 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171 4.366112575 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175 3.97350916513 - K_Bacteria.P_Fusobacteria.C_Fusobacteria 5.00205322161 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae 2.97347708655 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_constellatus 3.67466450143 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_.S_bacterium_HMT_075 2.78626895457 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_ 3.70324856312 RA_Stage_I_II 3.27771010627 0.0198140085184 K_Bacteria 6.0 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales 2.17829159965 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium.S_acidifaciens 4.1873583172 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_melaninogenica 3.52170972925 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii 4.58630649034 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_138 2.32504531997 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_134 2.83675736456 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus.S_johnsonii 3.25441488664 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae 2.93602343644 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137 2.68980284835 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales 4.56703515134 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_133 2.41581513772 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia 4.75811561469 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum_nov_97_077 2.92040327598 - K_Bacteria.P_Spirochaetes 4.01766069839 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae 3.56605600256 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_ 3.63917687789 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae 2.74032167631 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_micans 3.03367302248 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia 2.55153216808 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium 2.17829159965 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_leadbetteri 3.59756337611 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales 4.36681195813 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_maltophilum_nov_97_769 1.56203562973 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis 3.7528641336 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter 3.8144553442 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_.S_bacterium_HMT_085 1.46272931719 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_timidum 2.9552179403 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora 2.05785197718 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_.S__Eubacterium__brachy 4.00730885718 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_rava 2.33218324049 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium 3.6652768159 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_parasanguinis_clade_411 3.02455228072 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_timonensis_nov_97_769 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_892 1.86243800183 - K_Bacteria.P_Firmicutes.C_Negativicutes 4.43835238587 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_maltophilum 2.95049308442 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium.S_curtum 2.17829159965 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_392 3.26217206343 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio 0.0308269835406 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_endodontalis 3.8259705443 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_864 3.09051726766 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_aphrophilus 2.85728867811 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_sp__HMT_012 2.39088702986 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_511 2.44811764651 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_sp__HMT_036 3.21387277445 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_136 2.4118239245 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_legallii_nov_94_343 0.0308269835406 - K_Bacteria.P_Actinobacteria 5.57874992274 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae 3.90036656187 RA_Stage_III_IV 3.55755435718 0.0415832125616 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_ 2.70256594321 RA_Stage_III_IV 2.094953402 0.0361989783687 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_actinomycetemcomitans_nov_97_947 2.50054141815 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales 4.6537723858 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_sp__HMT_166 2.39421541961 RA_Stage_I_II 2.13323192055 0.000109610651943 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae.G_Wolinella.S_succinogenes_nov_97_550 2.45276438456 0.00039426088278 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_373 0.89245831833 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales 5.00205322161 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales 4.01766069839 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sicca 3.45427218584 - K_Bacteria.P_Tenericutes 3.01962512845 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_loescheii 2.8978102107 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sp__HMT_020 2.75992664445 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_.S_bacterium_HMT_096 3.20391557534 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae 4.43969660046 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio.S_sp__HMT_080 2.12047591111 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_326 3.40565343413 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_323 2.95709883159 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_526 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp53_2 2.90957848502 RA_Healthy_Gingivitis 2.46208748147 0.0456101837015 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_322 3.236792163 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_gingivalis 2.11881435156 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium 3.89063767817 - K_Bacteria.P_Firmicutes.C_Bacilli 5.23276155959 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_ 2.55056368781 RA_Stage_III_IV 2.13180626801 0.000884946731777 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_ 2.75930755422 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_.S_bacterium_MOT_129_nov_88_105 2.78476155725 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae 2.72725540346 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis_nov_97_787 2.90908359433 RA_Healthy_Gingivitis 2.75519301797 0.000448790917782 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_473 1.36956702743 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_.S__Eubacterium__yurii_subsps__yurii__margaretiae 2.50164940025 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella 4.49801583962 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia 2.6448367296 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_414 3.53724343818 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_ 2.56911607223 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_socranskii 3.41699244987 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola_nov_96_920 1.58405285977 RA_Stage_I_II 2.31967254364 0.00193045413623 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Brachymonas.S_denitrificans_nov_92_418 1.89824971281 - K_Bacteria.P_Chloroflexi.C_Anaerolineae 2.55056368781 RA_Stage_III_IV 2.14145911953 0.000884946731777 K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales.F_Anaeroplasmataceae 3.01962512845 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia_nov_97_516 3.1432177475 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_saccharolytica 2.74740268474 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_dentocariosa 4.91730737138 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp55_2 2.50773355137 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia 4.42979502659 RA_Healthy_Gingivitis 3.98714064031 0.0123441294678 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae 3.19804324448 RA_Stage_III_IV 2.89723982256 0.00678945236741 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales 3.6652768159 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales 4.34421330362 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_ignava 2.840443608 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hofstadii 3.15658277351 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales 3.46469163447 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_buccae 2.27735791891 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis_nov_97_510 2.29830677354 - K_Bacteria.P_Bacteroidetes 5.12327838017 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola 3.83528133408 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_micronuciformis 2.43468000353 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_247 1.73220958909 0.000580160661791 K_Bacteria.P_Actinobacteria.C_Actinomycetia 5.51914148287 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae 3.98846204815 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_249 1.80518365829 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Bilophila 2.93559448934 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_317_nov_97_536 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus.S_multispecies_spp50_2 2.74032167631 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_ 3.81841913872 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp31_2 2.35346004725 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis_nov_97_536 2.48361961836 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_ 4.32725906919 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_trevisanii 2.9260365159 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_multispecies_spp21_2 4.38215994626 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_94_882 3.57533022488 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oris 3.6753953326 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia 2.88258612888 RA_Stage_I_II 2.67918846421 0.0162433513216 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_ 4.30305528677 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae 2.55056368781 RA_Stage_III_IV 2.11712669633 0.000884946731777 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera 2.82912727078 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pleuritidis 3.51995076478 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae 2.55153216808 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_ 2.18765354503 0.0256444170423 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae 3.25441488664 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae.G_Soehngenia.S_saccharolytica_nov_84_855 1.90640779789 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_ 1.46272931719 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_haemolytica 2.4162513033 RA_Stage_I_II 2.35463554861 0.000291219572803 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii_nov_96_545 3.35960403745 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae 2.34405276513 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_ 2.84728931043 - K_Bacteria.P_Tenericutes.C_Mollicutes 3.01962512845 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 4.63694270378 RA_Stage_I_II 4.1311799293 0.0377052404106 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_.S_bacterium_HMT_356 3.70324856312 RA_Stage_I_II 3.28345686044 0.0198140085184 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_900 2.55901428975 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_downii 3.09964782178 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sanguinis 4.53588105063 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_spp36_2 4.06764153101 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_salivarius 3.54979861982 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_ 2.56911607223 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter.S_alactolyticus 2.75295056118 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria 4.36681195813 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium.S_moorei 2.88207246732 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_histicola 3.58964506309 RA_Stage_I_II 3.30237697772 0.0348121729118 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_elongata 3.4228210232 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_204 3.3133698782 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella.S_corrodens 3.43715694738 RA_Healthy_Gingivitis 3.06796889024 0.0138160906241 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_203 3.58573548154 RA_Stage_I_II 3.28494110157 0.0389471075464 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_ 2.50164940025 - K_Bacteria.P_Actinobacteria.C_Actinobacteria 4.86354826364 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas.S_hankookensis_nov_97_685 4.36681195813 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus 2.93602343644 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_periodonticum 3.19360628651 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_buccalis 3.95520632982 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia 4.96878247622 - K_Bacteria.P_Fusobacteria 5.19802097022 - K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales.F_Anaeroplasmataceae.G_Anaeroplasma.S_abactoclasticum_nov_86_538 3.01962512845 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_goodfellowii 2.6448367296 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia.S_defectiva 3.57095721302 RA_Healthy_Gingivitis 3.23147987774 0.0252720708214 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_ 2.84728931043 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Dubosiella 2.60460692076 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_066 2.42296498873 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_064 4.08437963157 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia.S_wiggsiae 3.46205546491 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sp__HMT_078 3.88169964242 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_australis 2.66287767405 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales 3.73329739231 RA_Healthy_Gingivitis 3.24500131008 0.0489812553361 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae 4.01766069839 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_actinomycetemcomitans 2.02095243893 RA_Healthy_Gingivitis 2.23717267761 0.000448790917782 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_.S_bacterium_HMT_093_nov_84_086 2.40597316144 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae 4.49801583962 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium 2.90511924773 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_097 2.19021470533 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_ 2.43340022631 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hofstadii_nov_96_970 3.25834856999 RA_Stage_I_II 3.0535137623 3.39345451601e-06 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_225 3.72020414237 - K_Bacteria.P_Tenericutes.C_Mollicutes.O_Anaeroplasmatales 3.01962512845 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_223 2.1852252595 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_subflava 3.33013929634 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes 4.49801583962 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_dispar 2.66260503394 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_ 2.43340022631 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_rubra 4.12239021309 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae 4.36681195813 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor.S_alocis 3.67613454312 RA_Stage_III_IV 3.36150394988 4.4564198823e-06 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Helicobacteraceae.G_Wolinella 2.45276438456 0.00039426088278 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella 3.73013595546 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae 2.80641241209 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_marshii 2.49492666865 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium 3.2891141267 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_aeria 4.33926675123 RA_Healthy_Gingivitis 3.93197587211 0.0305209233461 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_bacterium_HMT_369 2.32579317644 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_mucilaginosa 3.32798688117 - K_Bacteria.P_Firmicutes.C_Clostridia 4.98183595513 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_877 2.96211514065 RA_Stage_I_II 2.70266848493 1.29772306524e-06 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia 2.85774657321 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_335 3.10733267908 - K_Bacteria.P_Firmicutes 5.40400820667 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga 4.55401314665 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sp__HMT_018 1.80942859157 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_baroniae 1.88327447372 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia 4.39092021678 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flavescens 3.24796660961 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_adiacens 4.00816304714 RA_Healthy_Gingivitis 3.58542910798 0.00292756768788 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_129 2.24887036537 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae 4.1873583172 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus_clade_578 4.36212697158 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_362 2.37885578727 RA_Stage_I_II 2.17270918041 0.00384986163207 K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_360 3.6611021211 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_361 1.94678939722 RA_Stage_III_IV 2.29562821714 0.0149590326994 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris 4.14313422059 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria 4.02158027708 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Dubosiella.S_newyorkensis 2.60460692076 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella 3.68675236626 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mutans 4.00765899922 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_morbi 3.37528867137 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_97_835 3.70407737882 RA_Stage_I_II 3.46975104948 9.69607731413e-05 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169 4.83560969719 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_pneumosintes 3.3065093329 RA_Stage_III_IV 2.97613910526 0.0105607868883 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multiformis 2.37441950129 RA_Stage_I_II 2.42702693719 0.000362080535196 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_370 0.0 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_meyeri 3.40947109214 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_timonensis 2.13496741006 RA_Stage_III_IV 2.77958857661 0.0163540247476 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_canifelinum 2.27627003628 0.0239689882411 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_granulosa 3.50305116793 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales 5.33419066592 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_chosunense 3.46835246728 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris_nov_96_926 3.63770855264 RA_Stage_III_IV 3.43125778327 0.0149590326994 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma.S_faucium 2.2446672446 0.00302656073493 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium 4.1873583172 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_goodfellowii 3.28322207563 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter 2.75295056118 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_shahii 3.3288231951 - K_Bacteria.P_Firmicutes.C_Mollicutes 2.2446672446 0.00302656073493 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 1.96403011951 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_haemolyticus 2.13743209689 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas 4.36681195813 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175_nov_97_951 1.98859755564 - K_Bacteria.P_Gracilibacteria__GN02_ 2.56911607223 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_bergeri 3.01602785893 RA_Stage_III_IV 2.80398479185 0.0163540247476 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_.S_bacterium_HMT_870 1.11006928609 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 4.90010608404 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_417 3.77349733324 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_intermedius 3.91193755751 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_oralis 3.64860495752 - K_Bacteria.P_Saccharibacteria__TM7_ 4.32725906919 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales 3.19804324448 RA_Stage_III_IV 2.87614149095 0.00678945236741 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hongkongensis 4.02919974518 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis 3.39729520264 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae 4.66663426528 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia.S_sp__HMT_894 2.93532729134 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_97_689 2.65514943245 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae 3.94547892919 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas 4.53512700563 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Muribaculaceae.G_Muribaculaceae__G_1_ 2.99052348697 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroidaceae__G_1_.S_bacterium_HMT_272 1.96403011951 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_ 2.31807125444 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_380 2.36588387887 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_valvarum 2.86986570074 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_massiliensis 4.04752575286 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_atypica 2.74237477873 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_ 2.3448699594 RA_Stage_III_IV 2.41362124488 0.0264073055077 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_pseudopneumoniae 3.93471143956 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_412 2.62589603356 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia 3.46205546491 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales 5.23526423695 RA_Stage_I_II 4.76462513902 0.0148038926316 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales 4.1873583172 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis_nov_97_955 2.6597371512 RA_Stage_I_II 2.47850290706 0.00466504907273 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_propionica 4.05475996526 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_951 1.44776994886 RA_Stage_III_IV 2.25925747881 0.0264073055077 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_dentium 2.90249351973 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_.S__Eubacterium__saphenum 2.81817476225 RA_Stage_I_II 2.52237800683 0.000149147773412 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella 3.6400665675 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__minutum 2.01093795696 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_3_.S_bacterium_HMT_495 1.21166695557 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_denticola 3.26072238585 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_ 4.32725906919 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum 3.31590359238 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_ 4.23846458193 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus.S_stomatis 2.81587971227 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_haemolysans 3.11977546487 RA_Healthy_Gingivitis 2.7705944484 0.0441296600796 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus 3.19804324448 RA_Stage_III_IV 2.87104199366 0.00678945236741 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_180 3.73955328642 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_336 2.98199090693 RA_Healthy_Gingivitis 2.70185122609 0.0308336595643 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_.G_Bacteroidetes__G_6_.S_bacterium_HMT_516 2.3448699594 RA_Stage_III_IV 2.30515558194 0.0264073055077 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_332 2.7242540905 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia 3.7965880717 RA_Stage_III_IV 3.47792297393 0.00470729468231 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_96_008 2.56104175839 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales 2.93559448934 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_338 2.45132818725 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_lecithinolyticum 2.66927984046 RA_Healthy_Gingivitis 2.42973733283 0.0290590951426 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae 5.00205322161 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_ 2.56911607223 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales 3.90036656187 RA_Stage_III_IV 3.55718136457 0.0415832125616 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_ 2.3448699594 RA_Stage_III_IV 2.45082449019 0.0264073055077 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae 5.23522155425 RA_Stage_I_II 4.76462547342 0.0251629747608 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Brachymonas 1.89824971281 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_.S_bacterium_HMT_274 4.11230593788 - K_Bacteria.P_Spirochaetes.C_Spirochaetia 4.01766069839 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284_nov_97_746 2.79329083386 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae 1.90640779789 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_927_nov_91_411 2.12907653691 RA_Stage_III_IV 2.19753840395 0.000231505139543 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales 4.26992802843 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_flueggei 2.9217787629 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae 3.46469163447 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_dentalis 1.74225299627 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_rogosae 2.28890606301 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia.S_satelles 2.88258612888 RA_Stage_I_II 2.67894783108 0.0162433513216 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_056 2.60647183185 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilaceae__G_1_.S_bacterium_HMT_113 0.764508924225 RA_Stage_I_II 2.42346921158 0.00193045413623 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_88_613 2.05785197718 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oricola 2.1412770575 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella 4.88213584009 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_ 4.25788747425 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales 3.99099594947 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_869 2.57841237457 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_multispecies_spp5_2 3.92834289635 RA_Stage_I_II 3.66704867813 0.00193045413623 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_346_nov_97_768 0.226220187513 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flava 2.91072418427 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae 3.6652768159 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_490 1.74086277502 RA_Stage_I_II 2.14997482553 3.18757537723e-06 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Oscillospiraceae.G_Caproiciproducens.S_galactitolivorans_nov_90_042 2.72725540346 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_amylovorum 1.24483803111 RA_Stage_I_II 2.12137493802 0.000448790917782 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales 2.77187582274 RA_Healthy_Gingivitis 2.39987490051 0.0477903256111 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_219 2.64510022962 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_215 2.57693226617 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_212 3.39623191583 RA_Healthy_Gingivitis 3.06693979126 0.030677239292 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria 4.42679830406 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_HMT_100 3.12378574556 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_.S__Eubacterium__infirmum 2.59051395542 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_mucosa 3.86574575658 RA_Stage_I_II 3.56416689726 0.00570344799875 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales 2.55056368781 RA_Stage_III_IV 2.18819467241 0.000884946731777 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_254 1.37140310748 0.0149590326994 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella 4.11896585668 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_257 2.47876245649 RA_Stage_I_II 2.19778028495 6.71318611817e-05 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_258 1.88781711422 0.000643574533965 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_micra 4.52779394369 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_sp__HMT_183 4.4619062101 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_ 2.9102627486 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_invisus 3.5416471805 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae 4.6537723858 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Bulleidia 2.6450738766 RA_Stage_III_IV 2.38596475837 0.0104503702504 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Ralstonia 5.22029172203 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Bilophila.S_wadsworthia 2.93559448934 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio 2.12047591111 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia 3.57095721302 RA_Healthy_Gingivitis 3.2310789639 0.0252720708214 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_ 3.12378574556 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_gordonii 4.63910320737 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_808 2.61184205564 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_132 2.7541884962 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_umeaense 3.31572815811 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_110_nov_97_895 0.0 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales 4.02158027708 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_897 3.21298263932 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_896 3.89821734045 RA_Stage_I_II 3.64766955153 0.0193318144506 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_artemidis 2.96437584436 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_parvula 3.02772175484 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_376 2.43641845524 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_304 2.75042904669 RA_Stage_I_II 2.48069687323 0.00557356633785 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300 3.40922654107 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_301 2.2002129126 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Ralstonia.S_sp__HMT_406 5.22029172203 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_.S_bacterium_HMT_872 2.56911607223 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_275 1.97037205932 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sinensis 1.65407627394 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_277 2.33250760649 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_278 2.3259443007 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus 2.74032167631 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_sp__HMT_451 2.81947917433 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister 3.61004354593 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_salivae 3.3476608324 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfomicrobiaceae.G_Desulfomicrobium 2.33162659705 RA_Stage_I_II 2.28453584739 3.18757537723e-06 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum 2.97464739073 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_472 3.34156028093 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_070 3.48282383623 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_071 3.92318268772 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter 2.34405276513 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia 4.63694270378 RA_Stage_I_II 4.1311799293 0.0377052404106 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_349 3.94741602867 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_348 3.3622377173 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_cardiffensis 0.522079955209 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_uli 2.60339902852 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_ochracea 2.59697051319 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium 5.00205322161 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii 4.25740460327 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_347 3.20179396252 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_346 3.68324918391 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae 4.94156908813 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137_nov_97_030 2.36259080469 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Roseburia.S_intestinalis_nov_93_568 2.85774657321 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia 3.76177626704 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_ 4.26430732107 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella 4.00816304714 RA_Healthy_Gingivitis 3.58542910798 0.00292756768788