K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_parainfluenzae 4.526860497831884 Male_Diseased_Baseline 4.212814885584678 0.04375924539637822 K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_360 3.9019140208704792 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis 3.388795498942619 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__dentisani_clade_058 3.8799205334967315 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_umeaense 2.9501620737808016 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_223 3.5383811813309913 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_rubra 3.8164372046107173 Male_Diseased_Baseline 3.4779480995407828 0.03711514665772469 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_219 3.1110535013226275 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_rava 2.5409440218782073 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_fastidiosum 3.57035696270505 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_178 3.396232641207962 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus.S_stomatis 3.675592345995422 Female_Diseased_Baseline 3.3201672718429642 0.02170963263282577 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_138 2.6539526125375708 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_leadbetteri 3.7391084952127946 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oris 4.3115553688013595 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_4_.S_bacterium_HMT_355 2.0065153553491317 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_496 3.2068442740895122 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_149 2.6477057008027898 Female_Diseased_Baseline 2.485226580416768 0.00011947749586822104 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_infantis_clade_431 1.9471022696166673 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_443 2.3333020559074478 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_morbillorum 3.896294482772721 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sputigena 3.4989053639950773 Male_Diseased_Baseline 3.1458607871676856 0.04495503040266208 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sp__HMT_078 3.695254461854064 Female_Diseased_Baseline 3.234126743533342 0.014979637451197967 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171 3.313134477456214 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169 3.85544040348891 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_HMT_100 2.9519286616952134 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_intermedia 3.352579686755232 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_.S_bacterium_HMT_500 3.082350591112036 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_326 3.134590057012211 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus.S_sp__HMT_041 3.0985416576971434 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_134 3.3455236736517766 Female_Diseased_Baseline 3.013466419493819 0.040949224028271926 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_subflava 3.6544271313821763 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_097 2.91963929733571 Female_Diseased_Baseline 2.6717865445100766 0.012976280800417848 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sinus 3.227691620921018 Female_Diseased_Baseline 2.9338856449693727 0.04383076759330239 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_916 2.42335299976935 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_invisus 3.9507852481605545 Female_Diseased_Baseline 3.543525883012952 0.0012709734532107377 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_512 3.0483272569575077 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_498 3.846593035492616 Female_Diseased_Baseline 3.5665568065910787 0.008512745225024394 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_322 3.11205128358734 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hongkongensis 3.269535901637467 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_136 2.987416530065431 Female_Diseased_Baseline 2.685363403018828 0.0006448185060473655 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_278 3.2774372839088626 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio.S_sp__HMT_080 2.216039415976779 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_.S_bacterium_HMT_870 2.024804397227927 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_dispar 3.388314194742441 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella.S_corrodens 3.642703147673552 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_230 2.6371667875338063 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_rimae 4.004646392789718 Female_Diseased_Baseline 3.6705825028028007 0.0015709608159419788 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_socranskii 3.6241525082295345 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Eggerthia.S_catenaformis 2.5802522855966448 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_.S__Eubacterium__yurii_subsps__yurii__margaretiae 3.065677887917022 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_317 4.010722371251898 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus 3.07776894405456 Female_Diseased_Baseline 2.6310687772383825 0.012835794374812498 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_237 4.0753715092442455 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_864 3.66683856327713 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_parvula 3.2391352522663923 Female_Diseased_Baseline 2.819196943669869 0.008701941393723388 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis 4.340220668664395 Female_Diseased_Baseline 3.947879982349614 0.0053758509239212795 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_180 3.825118771147728 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_365 2.491258083673174 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii 4.001980136419738 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sputigena 3.9233098228424232 Female_Diseased_Baseline 3.4590967346909567 0.02616984307524359 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_rectus 1.8012372229495546 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__nodatum 3.247391541617838 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_.S_bacterium_HMT_075 3.3534825655487643 Female_Diseased_Baseline 2.8844529453207417 0.04846739552663595 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum 3.087112574175582 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_129 2.5260913826845983 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_mirabilis 4.195658846301187 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_australis 3.3149138272518615 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_145 2.634039970151628 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_937 1.5040730396136774 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_saburreum 3.611719651399331 Male_Diseased_Baseline 3.04866245942426 0.048254941142394925 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_flueggei 2.7792072721479886 Female_Diseased_Baseline 2.5699858771245467 0.008735155255654142 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_896 3.7540037278505896 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_132 2.7140960516143107 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_granulosa 3.792129613034856 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_221 2.5504998227469327 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flavescens 3.0921501905142192 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_haemolysans 3.626071939821541 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_showae 3.0532151662757276 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_513 2.9870046940897095 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_parasanguinis_clade_411 2.1144565816777714 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_257 2.574504329394245 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_.S_bacterium_HMT_274 3.6587218618175865 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_479 2.521002074524071 Female_Diseased_Baseline 2.384430479372899 0.00024006358908596108 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_elegans 2.0851601897173424 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_maculosa 3.431457894899927 Female_Diseased_Baseline 3.098895311007086 0.003784838969109143 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_412 1.7117455125166918 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_335 3.377397042446664 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_chosunense 3.510675851744871 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_vespertina 2.8519793129456974 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_valvarum 3.5125802780197017 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia.S_exigua 2.863206204304385 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_diversum 3.8096843081429563 Female_Diseased_Baseline 3.5088422126805168 0.0016626704949643785 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_micra 4.131224777799271 Female_Diseased_Baseline 3.7762016558861435 0.003895771638300617 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroidaceae__G_1_.S_bacterium_HMT_272 2.2436052811348546 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_900 2.480145045862168 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sicca 4.256229159505073 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_373 3.3593961451142453 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_475 1.6935820907886274 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_denticola 4.452921517447736 Female_Diseased_Baseline 4.143907879325549 0.006469675854545245 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_525 4.348626387557625 Female_Diseased_Baseline 3.999576181536472 0.011611465001073443 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_392 2.894770880296322 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_349 3.5174086073711996 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_ochracea 2.9742819691345805 Female_Diseased_Baseline 2.6713010855964776 0.0111469242773047 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_150 2.7033732700610553 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_sp__HMT_451 2.0568885920240407 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Centipeda.S_periodontii 2.2442131789533635 Female_Diseased_Baseline 2.291711708780698 0.006198042352676955 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_.S_bacterium_HMT_096 3.6426477168167097 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_gingivalis 2.718174915122938 Female_Diseased_Baseline 2.4332427193470756 0.026110186612018565 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_897 3.9203173434680063 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_225 3.1860028840768084 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_346 3.972897977061439 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_472 3.277202936035297 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_segnis 3.021309223694579 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_sp__HMT_166 2.9527080367634007 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia.S_satelles 3.202045905719139 Female_Diseased_Baseline 2.8673780160671445 0.0017833566591233026 K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_362 3.5107097585927147 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_277 2.2375714956484005 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_wadei 4.044725224541892 Female_Diseased_Baseline 3.689490355932069 0.00539335628241962 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_808 3.2491080855139893 Female_Diseased_Baseline 2.9934446428087638 0.011932917513295248 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_.S_bacterium_HMT_439 2.651680621378084 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_155 3.5809257099707716 Female_Diseased_Baseline 3.2925984607658942 0.0025189624131355306 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_anginosus 4.141716772201685 Female_Diseased_Baseline 3.8624402751409237 0.012003506197684722 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_292 2.7989039754165566 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_892 2.2524209699059017 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hofstadii 3.602154215453443 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_323 2.931600676737708 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum 3.4530108658592793 Female_Diseased_Baseline 2.9931499728614783 0.004818482127957969 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_buccalis 3.43281779523815 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_481 2.509429323904933 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_baroniae 2.2576498686119217 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_medium 2.635670891186522 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mitis 3.4629593574941087 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_511 2.9647450289858517 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_146 2.6102609267058816 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_morbi 3.545898145483261 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_347 3.19227529132812 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_nigrescens 4.044342047637936 Female_Diseased_Baseline 3.595971012058772 0.010811845461731584 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_melaninogenica 3.665787683027347 Female_Diseased_Baseline 3.2293355644053188 0.01061711108693795 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola 3.8058335044411415 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_268 2.316490754284119 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_ignava 3.240975060273957 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_064 3.064622302338456 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_adiacens 4.13347057967289 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_314 3.5912953853434604 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_vestibularis 1.1149388896933234 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_877 3.263195516324311 Female_Diseased_Baseline 2.896842191467214 0.019201960597433173 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_914 2.145815456166393 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_salivarius 3.4164985517780777 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_gingivalis 3.9793691437480394 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix 3.307897206791509 Female_Diseased_Baseline 2.9792577362770136 0.0015560535184200256 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_goodfellowii 3.0499246192757847 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__dentisani_clade_398 2.8651394247595188 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_dentocariosa 4.071202251809899 Male_Diseased_Baseline 3.7065464790366796 0.01324016649185208 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_458 3.0887268394613763 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_constellatus 4.372057937528493 Female_Diseased_Baseline 4.0633144314729295 0.008511439564907516 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_endodontalis 2.9281474481503276 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175 3.955904643653658 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_loescheii 3.465898947226284 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_247 2.7664509189091047 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_elongata 3.35986458445219 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_902 2.575938564326629 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_sanguinis 2.4601361637067414 Male_Diseased_Baseline 2.59719270413604 0.009223104689553532 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_aphrophilus 3.0917704060303475 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_paraphrophilus 2.9169830676237196 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_serpentiformis 2.358054651088603 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_micronuciformis 2.7367643565243744 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_423 4.566378032220314 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor.S_alocis 3.668058674717869 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_timonensis 2.7875970439502855 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_.S_bacterium_HMT_081 1.9090222046552323 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_110 3.869437386489249 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_.S_bacterium_HMT_351 2.57306655919534 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum 4.709503720915791 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sp__HMT_018 3.797709480395351 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_218 2.7048591303172795 Female_Diseased_Baseline 2.4924155541594963 0.035806535158828756 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_canifelinum 3.1106633106148416 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_dentalis 2.5616442851167487 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_203 3.6611266069764508 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium.S_curtum 2.9315467011177847 Female_Diseased_Baseline 2.5997237757382807 0.028232473611327635 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus_clade_578 4.083801113226634 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_longum 3.6104204439705554 Female_Diseased_Baseline 3.150755137368125 0.004676922383942999 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_951 2.108014123571708 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_.S__Eubacterium__saphenum 3.34873206192491 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flava 4.159910286696869 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_898 1.7854700359495972 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_sp__HMT_807 4.1644908977133435 Female_Diseased_Baseline 3.7574023926658624 0.024464012968606178 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii 4.468704887516237 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pallens 3.710715619429875 Female_Diseased_Baseline 3.3799249959041533 0.008349732908238061 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_.S_bacterium_HMT_085 2.804188454326951 Female_Diseased_Baseline 2.4928800497697967 0.011398440413876092 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_234 2.420655334464149 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_919 2.788238816970041 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium.S_moorei 3.6641612780769086 Female_Diseased_Baseline 3.358829373515698 0.0027186548536623765 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_301 2.3622713026042894 Female_Diseased_Baseline 2.3050873976047317 0.007448459632097476 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_buccae 2.3431296816749705 Female_Diseased_Baseline 2.2800636394755616 0.003991230839999935 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia.S_defectiva 3.6086657561294477 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_204 3.3269086144809803 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_253 0.0 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_odontolytica 3.6054047762884376 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_denitrificans 3.0664083834042204 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_massiliensis 3.9814134344438377 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_338 3.037832831048347 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia 3.856135946188076 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_315 2.4162394304090333 Female_Diseased_Baseline 2.3247645742951084 0.0305273238801533 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_jejuni 1.0300357096540205 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_238 2.6408719383698136 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_957 3.644899233024808 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_348 3.375954035759094 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_361 2.9879237225281816 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_dentium 2.3683232500300826 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_910 2.6425045054047165 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_324 3.136059502621601 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_uli 3.031088282777401 Male_Diseased_Baseline 2.7332978948559883 0.03708005038464791 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oricola 2.652082329713226 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_336 3.2027709883660624 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia 3.724467775857224 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_intermedius 3.89133456955913 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_lecithinolyticum 3.2392636483075523 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_marshii 2.2645727871635666 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_.S_bacterium_HMT_872 1.6160615379738472 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sinensis 2.869562230496749 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_pasteri 3.5644538799233003 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_bacilliformis 3.077327365475884 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_8_.S_bacterium_HMT_955 1.4887551259202263 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_3_.S_bacterium_HMT_495 2.060636279173965 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilaceae__G_1_.S_bacterium_HMT_113 2.4506301839802846 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_goodfellowii 2.8077104098124166 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_7_.S_bacterium_HMT_086 2.431553965464695 Female_Diseased_Baseline 2.3191746497982715 0.0020873498152879874 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_380 3.4364262817718463 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus.S_caprae 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_mucosa 3.4017951612814006 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_timidum 3.3996246445588065 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_desulfuricans 2.8671888977736493 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_070 3.5957614386101793 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_artemidis 3.1965464503726504 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_089 1.8145250214076825 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_.S__Eubacterium__brachy 3.471067770191017 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia.S_sp__HMT_894 3.20321564163564 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_135 1.441758070387284 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_oralis 3.0707984592807547 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_salivae 3.1843502551382503 Female_Diseased_Baseline 2.9036539621334114 0.024182698377724847 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_345 2.1499771627530584 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_874 2.093159601796318 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_haemolytica 2.203852554338806 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_sp__HMT_183 4.412617562001338 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia.S_wiggsiae 3.2004033408859467 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_417 3.651681137690495 Female_Diseased_Baseline 3.137151811505941 0.012533308949258977 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_414 3.923483119180076 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis 3.5976939221717212 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__vincentii 3.562620348321247 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091 2.4351447213929895 Female_Diseased_Baseline 2.3722271412515186 0.012982972930050216 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__minutum 2.499081414217407 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_cardiffensis 2.0038263184262557 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Propionibacteriaceae.G_Cutibacterium.S_acnes 4.594191197543818 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_.G_Bacteroidetes__G_6_.S_bacterium_HMT_516 2.3211894872082306 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pleuritidis 3.48551812532145 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S_stomatis 2.1278019265680643 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_bacterium_HMT_369 2.895619686130405 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_vincentii 1.990324972408538 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_sp__HMT_012 0.5351552930765133 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_304 1.7976074565231233 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multiformis 3.3620471376176986 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter.S_alactolyticus 2.6300593909499907 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_.S_bacterium_HMT_905 2.7020229146741794 Female_Diseased_Baseline 2.5122681426049933 0.03660288159156534 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_071 4.233137351898248 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_aeria 4.390318227900148 Male_Diseased_Baseline 4.021893718784515 0.009474836240867597 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_.S_bacterium_HMT_356 3.960510768528955 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oralis 2.9026192106003075 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_863 1.766115293541069 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_920 2.320197621167068 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_mucilaginosa 2.966998313309498 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_micans 2.4876121532076643 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_448 4.686632156938114 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284 1.6748485002757183 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S__Eubacterium_yurii 2.6518807939144673 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_376 2.157023054391696 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_shahii 2.4272763053755346 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_875 1.9571980707246832 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_170 4.434696593632828 Male_Diseased_Baseline 4.09923422039656 0.038982715105127054 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_909 2.888586414924739 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus.S_salivarius 3.032704188499124 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium.S_acidifaciens 0.10319967930137636 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_286 2.9942513590403106 Female_Diseased_Baseline 2.582037771234534 0.004110914666266144 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_johnsonii 3.562634286903563 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137 2.548655366898883 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_256 2.4273127247628077 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_georgiae 3.9007659623696456 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_463 2.9139602489942655 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma.S_faucium 2.3375441510836037 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella.S_sp__HMT_521 2.884907213964971 Female_Diseased_Baseline 2.6062165392317937 0.005571279933869913 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_167 2.9137037744062178 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Colibacter.S_massiliensis 3.0155085076015955 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_869 3.188363886189633 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__animalis 4.117130612848204 Female_Diseased_Baseline 3.730325150525039 0.012591004680805207 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_2_.S_bacterium_HMT_350 3.0127150588680007 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium.S_sp__HMT_199 1.3237464677081412 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis 4.098699645632188 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacteriaceae__G_1_.S_bacterium_HMT_915 3.3555086697118424 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_saccharolytica 2.979307718944426 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_peroris 2.6980010615053756 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_trevisanii 2.4402406701199784 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_dentalis 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_168 2.5201006169588753 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_280 2.479404038646358 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_tannerae 4.042474397678194 Female_Diseased_Baseline 3.604896819896771 0.04328253189664666 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis 3.2011778383983063 Female_Diseased_Baseline 2.9138642193090942 0.04124404731835814 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii 4.305331871658636 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_gracilis 3.757868729421085 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_meyeri 2.725670622826861 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_370 2.279507569848382 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_maltophilum 3.439673247821566 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_.S__Eubacterium__infirmum 3.5509435697921217 Female_Diseased_Baseline 3.2489595214837004 0.003737995992125742 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_propionica 4.2686604555450645 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_359 3.8182104016576695 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_056 2.65245112972038 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_downii 3.3053317391276997 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_endodontalis 3.8852950870985645 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_393 2.658424341206989 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_denticola 3.5139637069001934 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus.S_geminatus 3.1175939814696867 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_526 1.912753906407898 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_parvula 3.6553426595225997 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_332 2.2464296013008234 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris 4.133657387345707 Female_Diseased_Baseline 3.757670324471079 0.018071132341569252 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mutans 2.712758054788699 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis 4.204812125850472 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae 3.4783772858963533 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300 3.4290298890762427 Female_Diseased_Baseline 2.991030296683142 0.027724063227945447 K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_atypica 3.3223464688941764 Female_Diseased_Baseline 3.0160786335833807 0.041310477966265524 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_hwasookii 3.075442277349124 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_473 3.2931608354416335 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_gordonii 4.255844471248808 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sanguinis 4.371158990908046 Male_Diseased_Baseline 3.951699952382049 0.03604245669227176 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_212 3.5249732244667222 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_periodonticum 3.2300963664663214 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_215 3.304624543612179 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_231 3.175124996903205 Female_Diseased_Baseline 2.729949874367632 0.034914588752273074 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_haemolyticus 2.1175771887969406 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_949 2.0410671724128786 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_concisus 3.175965365327389 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_083 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_dianae 3.517243328826238 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_275 3.167207459782323 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_96_838 3.4630056779432223 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis_nov_97_510 3.0449366188184817 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis_nov_97_959 3.7618743570995834 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae_nov_97_951 2.300294816337144 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_94_882 3.797232821120803 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_769 1.9365558338580573 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_481_nov_97_822 2.5755976786969144 Female_Diseased_Baseline 2.342630011584939 0.03412610183846315 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Hoppeia.S_youngheungensis_nov_80_457 2.5705855145810883 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171_nov_96_813 3.56149720128054 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300_nov_97_955 3.5377421696106275 Female_Diseased_Baseline 3.2454690430244857 0.0010895877772383422 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_897_nov_97_769 3.6144968144062437 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_legallii_nov_94_343 3.4661941438282535 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia_nov_97_308 3.060539685806679 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia.S_sanguinegens_nov_90_578 2.947322921073294 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_88_613 1.4023117348579517 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum_nov_97_484 2.554082724812154 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175_nov_97_751 1.6168577873115069 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_348_nov_95_089 3.3888723894367696 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_955 2.3612300957773398 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis_nov_97_536 1.944182529177724 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales.F_Tepidisphaeraceae.G_Tepidisphaera.S_mucosa_nov_92_461 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix_nov_97_822 2.5105793999021837 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii_nov_97_963 3.3070654412617633 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris_nov_97_131 0.7765004247893645 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_96_218 1.3465911654916913 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284_nov_97_541 2.062547569240493 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137_nov_97_228 2.5770921915137364 Female_Diseased_Baseline 2.4524061781940896 0.01984558274947815 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169_nov_97_992 2.896411353837144 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis_nov_88_843 2.5424607226203406 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola_nov_96_920 3.2714875415404174 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum_nov_89_452 1.6218116052968206 Female_Diseased_Baseline 2.3935980244685937 0.04143577635757321 K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_.F_Alphaproteobacteria__F_1_.G_Micavibrio.S_aeruginosavorus_nov_86_105 2.56310048358084 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis_nov_97_988 3.349789960909905 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae.G_Propionivibrio.S_dicarboxylicus_nov_93_802 1.979849000495122 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_927_nov_91_411 2.621200964376284 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae.G_Schnuerera.S_ultunensis_nov_84_696 2.2397041264342077 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_zoohelcum_nov_92_798 1.2998820813393053 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_96_933 2.2286626052368064 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_97_642 2.5867730962950954 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_97_899 3.0514795746833623 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_146_nov_97_250 2.1740008579276355 Female_Diseased_Baseline 2.1943244183237094 0.01811538469621246 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster.S_bolteae_nov_88_494 2.100642248013929 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_225_nov_96_522 3.2226749117019278 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_443_nov_97_955 1.731595724501193 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_475_nov_97_947 1.790229376664735 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_gordonii_nov_97_018 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Brachymonas.S_denitrificans_nov_92_213 2.489724879548907 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091_nov_96_653 1.963624856771379 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_96_634 1.8051318562479224 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sp__HMT_078_nov_92_917 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137_nov_95_842 2.524700607848599 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_97_605 3.5323699588687236 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_951 3.2396797248851255 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_vespertina_nov_97_551 3.999561824887618 Female_Diseased_Baseline 3.58576248339997 0.006642443874918585 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175_nov_97_746 3.138012397255353 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_multispecies_spp13_2 4.2487187954884 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_multispecies_spp2_2 2.3086140513321025 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp20_2 2.5943399107078844 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_multispecies_spp23_2 2.227993695717705 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp31_2 2.386836005146637 Female_Diseased_Baseline 2.265332787734126 0.030842999891227674 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp33_2 1.6017092230778815 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_multispecies_spp38_2 2.9083159919644923 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae.G_Bradyrhizobium.S_multispecies_spp39_3 3.9256541208125655 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_spp42_2 3.7072981517811474 Female_Diseased_Baseline 3.3498250932263374 0.027716356537942216 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_multispecies_spp46_2 0.0 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_multispecies_spp47_2 2.690573005806573 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp5_2 2.3382685387701785 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp51_2 1.8232208518560156 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_multispecies_spp52_2 2.9292305562948213 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_multispecies_sppn10_2_nov_97_239 1.6873409936093853 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_multispecies_sppn14_2_nov_97_536 1.417946997337426 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_sppn17_3_nov_97_845 2.3322469724809354 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Cohnella.S_multispecies_sppn18_2_nov_92_000 0.0 - K_Bacteria 5.999999999999999 - K_Bacteria.P_Proteobacteria 5.1446712218612785 Male_Diseased_Baseline 4.707598215819671 0.0027541385788002583 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria 4.667983234412298 Male_Diseased_Baseline 4.286730444541079 0.02990689503505939 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales 4.578454498785542 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae 4.578454498785542 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus 4.528549601001784 Male_Diseased_Baseline 4.213598268533637 0.04375924539637822 K_Bacteria.P_Synergistetes 4.250775753494138 - K_Bacteria.P_Synergistetes.C_Synergistia 4.250775753494138 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales 4.250775753494138 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae 4.250775753494138 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium 4.250775753494138 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria 4.856736279088125 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales 4.73407103113141 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae 4.73407103113141 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella 3.5609786020521597 - K_Bacteria.P_Firmicutes 5.486763879073697 - K_Bacteria.P_Firmicutes.C_Bacilli 5.22104323730146 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales 5.1920157196595245 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae 5.139522127374371 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus 5.139522127374371 - K_Bacteria.P_Firmicutes.C_Clostridia 5.008203419831074 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales 4.841200024860732 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_ 4.388261564874355 Female_Diseased_Baseline 3.6864758214822757 0.0329106693769283 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum 3.8012641886558876 - K_Bacteria.P_Fusobacteria 5.016487885244585 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia 4.57201822794461 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales 4.57201822794461 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae 4.57201822794461 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia 4.565992323225509 - K_Bacteria.P_Actinobacteria 5.521952453777361 - K_Bacteria.P_Actinobacteria.C_Actinobacteria 4.889776194175844 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales 4.437493380861844 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae 4.437493380861844 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia 4.399958785342635 - K_Bacteria.P_Bacteroidetes 5.2817868589962425 Female_Diseased_Baseline 4.506547892625763 0.010932905952920562 K_Bacteria.P_Bacteroidetes.C_Bacteroidia 5.23714578318287 Female_Diseased_Baseline 4.6728016530402385 0.0018951045909141248 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales 5.23714578318287 Female_Diseased_Baseline 4.6728016530402385 0.0018951045909141248 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 5.131613852887914 Female_Diseased_Baseline 4.671122275961862 0.001467448074870921 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella 4.129654786183964 Female_Diseased_Baseline 3.7009069930537466 0.04182729045587196 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales 4.7000099539045515 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae 4.7000099539045515 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia 4.339075298750439 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_ 4.425405298267055 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus 3.675592345995422 Female_Diseased_Baseline 3.3228617989517244 0.02170963263282577 K_Bacteria.P_Firmicutes.C_Negativicutes 4.679936957722924 Female_Diseased_Baseline 4.232069479663783 0.004716967933733611 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales 4.504598366765298 Female_Diseased_Baseline 4.048320053787966 0.004716967933733611 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae 4.504598366765298 Female_Diseased_Baseline 4.048320053787966 0.004716967933733611 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas 4.491595727187119 Female_Diseased_Baseline 4.03081312251271 0.005298129468233485 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia 4.636927019317454 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales 4.636927019317454 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 4.636927019317454 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga 4.6206033963544035 - K_Bacteria.P_Actinobacteria.C_Actinomycetia 5.3934783557345325 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales 5.291979108294689 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae 5.288971639121247 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces 5.288971639121247 - K_Bacteria.P_Saccharibacteria__TM7_ 4.517559794030186 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_ 4.517559794030186 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_ 4.517559794030186 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_ 4.376517424789278 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_4_ 2.0065153553491317 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella 5.086073491900883 Female_Diseased_Baseline 4.622336363660228 0.0009901269176548452 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales 4.03163590146805 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae 4.03163590146805 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella 4.03163590146805 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium 3.822602596500464 Female_Diseased_Baseline 3.3942465437943485 0.011846512687584777 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales 3.869885792246857 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae 3.8346101975957025 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_ 2.9519286616952134 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_ 3.082350591112036 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria 3.6916730323189757 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales 3.0985416576971434 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae 3.0985416576971434 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus 3.0985416576971434 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria 4.6723038153153365 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum 3.8828401438496507 Female_Diseased_Baseline 3.390838951525217 0.0016331081239739926 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae 4.553097214798665 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella 3.9148198639659566 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales 4.2013064421599395 Female_Diseased_Baseline 3.7701328838656285 0.005802324875246136 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae 4.2013064421599395 Female_Diseased_Baseline 3.7701328838656285 0.005802324875246136 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister 3.9507852481605545 Female_Diseased_Baseline 3.543525883012952 0.0012709734532107377 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter 3.666833701086343 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella 3.2038230157946597 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas 4.4395894892780525 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio 2.216039415976779 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_ 2.024804397227927 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes 4.400040058596021 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae 4.400040058596021 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella 4.400040058596021 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella 3.642703147673552 - K_Bacteria.P_Spirochaetes 4.3597707090346445 - K_Bacteria.P_Spirochaetes.C_Spirochaetia 4.3597707090346445 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales 4.3597707090346445 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae 4.3597707090346445 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema 4.3597707090346445 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia 4.458762965743268 Female_Diseased_Baseline 4.05443651192893 0.026794042133065292 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales 4.445668161895565 Female_Diseased_Baseline 4.039752039241435 0.026794042133065292 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae 4.433821517873274 Female_Diseased_Baseline 4.030053340520809 0.026525920324386613 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella 4.0734215927501625 Female_Diseased_Baseline 3.7112433031924574 0.001900384531967331 K_Bacteria.P_Firmicutes.C_Erysipelotrichia 3.6985615331441704 Female_Diseased_Baseline 3.4035833316922224 0.0033366382476312994 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales 3.6985615331441704 Female_Diseased_Baseline 3.4035833316922224 0.0033366382476312994 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae 3.6985615331441704 Female_Diseased_Baseline 3.4035833316922224 0.0033366382476312994 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Eggerthia 2.5802522855966448 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_ 3.094947152279261 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_ 3.1856942717925225 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_ 3.1856942717925225 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_ 3.1856942717925225 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_ 2.7864015000102142 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria 3.867121133454836 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales 3.867121133454836 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae 3.867121133454836 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter 3.867121133454836 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_ 3.2675917322675896 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae 3.461471109405231 Female_Diseased_Baseline 3.0116348315360604 0.022702578891411754 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_ 3.3534825655487643 Female_Diseased_Baseline 2.896211439675431 0.04846739552663595 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales 4.515709060581739 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae 4.515709060581739 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium 4.515709060581739 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_ 3.7485926067117417 Female_Diseased_Baseline 3.409673366982295 0.006855151365102447 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales 4.245433765150654 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae 4.195658846301187 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia 4.195658846301187 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_ 3.6587218618175865 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_ 3.6587218618175865 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae 4.1352684336658205 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella 4.1352684336658205 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales 3.9381657396699747 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae 3.9381657396699747 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium 3.9381657396699747 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae 2.875569331766393 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia 2.863206204304385 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium 3.952383959192121 Female_Diseased_Baseline 3.579148063120069 0.003755512959832665 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae 4.15512563827579 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas 4.14896855786151 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 2.2436052811348546 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroidaceae__G_1_ 2.2436052811348546 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_ 4.352589221618884 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella 3.559760127512056 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Centipeda 2.2442131789533635 Female_Diseased_Baseline 2.291237993334652 0.006198042352676955 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_ 3.6426477168167097 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella 3.421362453570083 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia 3.202045905719139 Female_Diseased_Baseline 2.8665705045040744 0.0017833566591233026 K_Bacteria.P_Chloroflexi 2.651680621378084 - K_Bacteria.P_Chloroflexi.C_Anaerolineae 2.651680621378084 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales 2.651680621378084 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae 2.651680621378084 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_ 2.651680621378084 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_ 2.9647450289858517 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga 4.533043640340146 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales 4.57139963823753 Male_Diseased_Baseline 4.198444150033301 0.006658238664646632 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae 4.57139963823753 Male_Diseased_Baseline 4.198444150033301 0.006658238664646632 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia 4.57139963823753 Male_Diseased_Baseline 4.198444150033301 0.006658238664646632 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera 2.7367643565243744 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor 3.668058674717869 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_ 2.57306655919534 - K_Bacteria.P_Fusobacteria.C_Fusobacteria 4.842843707959397 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales 4.842843707959397 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae 4.842843707959397 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium 4.842843707959397 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales 2.9315467011177847 Female_Diseased_Baseline 2.6003011903554714 0.028232473611327635 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae 2.9315467011177847 Female_Diseased_Baseline 2.600331242427709 0.028232473611327635 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium 2.9315467011177847 Female_Diseased_Baseline 2.6009941226567794 0.028232473611327635 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_ 3.34873206192491 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella 4.185012794178681 Female_Diseased_Baseline 3.745706534229264 0.04042784199553767 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_ 2.804188454326951 Female_Diseased_Baseline 2.495691447165643 0.011398440413876092 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium 3.6641612780769086 Female_Diseased_Baseline 3.3606521314443265 0.0027186548536623765 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae 3.6086657561294477 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia 3.6086657561294477 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales 3.26004403169871 Female_Diseased_Baseline 2.951173014645535 0.027229652270979555 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae 3.26004403169871 Female_Diseased_Baseline 2.9517133813172043 0.027229652270979555 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium 2.3683232500300826 - K_Bacteria.P_Gracilibacteria__GN02_ 1.6160615379738472 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_ 1.6160615379738472 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_ 1.6160615379738472 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_ 1.6160615379738472 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_ 1.6160615379738472 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_8_ 1.4887551259202263 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_3_ 2.060636279173965 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilaceae__G_1_ 2.4506301839802846 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia 2.8077104098124166 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_7_ 2.431553965464695 Female_Diseased_Baseline 2.3215871129673697 0.0020873498152879874 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus 0.0 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales 3.5637168272294266 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae 3.5637168272294266 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio 3.5637168272294266 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_ 3.471067770191017 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae 3.2800102270817875 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia 3.20321564163564 - K_Bacteria.P_Absconditabacteria__SR1_ 2.363095998991581 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_ 2.363095998991581 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_ 2.363095998991581 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_ 2.363095998991581 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_ 2.363095998991581 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia 3.2004033408859467 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_ 2.5039456093012546 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Propionibacteriaceae 4.594191197543818 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Propionibacteriaceae.G_Cutibacterium 4.594191197543818 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_ 2.3211894872082306 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_ 2.3211894872082306 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_ 2.3211894872082306 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_.G_Bacteroidetes__G_6_ 2.3211894872082306 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae 2.68460286879542 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter 2.68460286879542 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_ 3.2137801868533544 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae 2.6300593909499907 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter 2.6300593909499907 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi 2.7020229146741794 Female_Diseased_Baseline 2.5233510058496855 0.03660288159156534 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales 2.7020229146741794 Female_Diseased_Baseline 2.5555923184885807 0.03660288159156534 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae 2.7020229146741794 Female_Diseased_Baseline 2.5547619197010523 0.03660288159156534 K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_ 2.7020229146741794 Female_Diseased_Baseline 2.5514269189262673 0.03660288159156534 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_ 3.960510768528955 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_ 3.960510768528955 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae 3.032704188499124 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus 3.032704188499124 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales 0.10319967930137636 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae 0.10319967930137636 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium 0.10319967930137636 - K_Bacteria.P_Firmicutes.C_Mollicutes 2.3375441510836037 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales 2.3375441510836037 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae 2.3375441510836037 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma 2.3375441510836037 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella 2.884907213964971 Female_Diseased_Baseline 2.6015649861210473 0.005571279933869913 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae 3.0439573359754175 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus 3.0439573359754175 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Colibacter 3.0155085076015955 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_2_ 3.0127150588680007 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium 1.3237464677081412 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacteriaceae__G_1_ 3.3555086697118424 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_ 3.5509435697921217 Female_Diseased_Baseline 3.2521041093633998 0.003737995992125742 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus 3.1175939814696867 - K_Bacteria.P_Bacteroidota 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Hoppeia 2.5705855145810883 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia 2.947322921073294 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora 1.4023117348579517 - K_Bacteria.P_Planctomycetota 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales.F_Tepidisphaeraceae 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales.F_Tepidisphaeraceae.G_Tepidisphaera 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria 3.9441031494547767 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_ 2.56310048358084 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_.F_Alphaproteobacteria__F_1_ 2.56310048358084 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_.F_Alphaproteobacteria__F_1_.G_Micavibrio 2.56310048358084 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales 1.979849000495122 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae 1.979849000495122 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae.G_Propionivibrio 1.979849000495122 - K_Bacteria.P_Firmicutes.C_Tissierellia 2.2397041264342077 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales 2.2397041264342077 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae 2.2397041264342077 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae.G_Schnuerera 2.2397041264342077 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster 2.100642248013929 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Brachymonas 2.489724879548907 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales 3.9256541208125655 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae 3.9256541208125655 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae.G_Bradyrhizobium 3.9256541208125655 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Cohnella 0.0 -