K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_parainfluenzae 4.526860497831884 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_360 4.029386764109722 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis 3.3668837869722745 Male_Diseased_Baseline 3.082070454758244 0.0036913067276345456 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__dentisani_clade_058 3.8799205334967315 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_umeaense 3.167425229879941 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_223 3.1577327934205495 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_rubra 3.8164372046107173 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_219 3.2848234347706002 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_rava 2.6744611727040297 Male_Diseased_21_days 2.571023128514622 0.018207880976668925 K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_fastidiosum 3.806085254046149 Male_Diseased_21_days 3.07447439902105 0.04557652334269509 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_178 3.2591190183394687 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus.S_stomatis 3.810778075914576 Male_Diseased_21_days 3.482219697903312 0.013560559068111818 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_138 3.2043001279050127 Male_Diseased_21_days 2.9097636136381446 0.03658820047083796 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_leadbetteri 3.8554375698885215 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oris 4.3115553688013595 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_4_.S_bacterium_HMT_355 2.883010410299388 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_496 3.2068442740895122 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_149 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_infantis_clade_431 1.1591310545817586 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_443 3.1088475558132522 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_morbillorum 4.011793918389184 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sputigena 3.4989053639950773 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sp__HMT_078 3.484388006966409 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171 3.4821045852685537 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169 3.85544040348891 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_HMT_100 3.6637946232071945 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_intermedia 4.5385202614976095 Male_Diseased_21_days 4.203521628202072 0.022032513930682937 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_.S_bacterium_HMT_500 3.4671887689527963 Male_Diseased_21_days 2.95027076594369 0.03628688880285449 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_326 2.059004133075873 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus.S_sp__HMT_041 3.648542121978514 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_134 3.424464765935016 Male_Diseased_21_days 2.9525145899992262 0.0004004147471569073 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_subflava 3.2088857361430048 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_097 2.6780470554568883 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sinus 2.463060779463854 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_916 2.42335299976935 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_invisus 3.7380744314699577 Male_Diseased_21_days 3.2375062475348906 0.02500992240797771 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_512 2.938566417728971 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_498 3.2493048874882144 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_322 3.11205128358734 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hongkongensis 3.0828013355617006 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_136 2.9139653876417806 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_278 2.522683279349588 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio.S_sp__HMT_080 3.1851936934960947 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_.S_bacterium_HMT_870 2.5621394581962194 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_dispar 3.388314194742441 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella.S_corrodens 3.642703147673552 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_230 2.6371667875338063 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_rimae 3.4328343895778994 Male_Diseased_21_days 2.9898597026306954 0.013460421998445016 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_socranskii 3.862670573104149 Male_Diseased_21_days 3.31324052484399 0.0015090839251108512 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Eggerthia.S_catenaformis 3.7097909886926117 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_.S__Eubacterium__yurii_subsps__yurii__margaretiae 3.52765716970148 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_317 4.167153417848328 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus 2.7857425071375554 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_237 3.737017012024634 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_864 3.66683856327713 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_parvula 2.9610801898463768 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis 4.0705198717705064 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_180 3.825118771147728 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_365 2.6632785736975735 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii 4.246432798528286 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sputigena 3.870885167055055 Male_Diseased_21_days 3.27634825632408 0.004115899377750352 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_rectus 3.2515988729667207 Male_Diseased_21_days 2.857885132892076 0.0351870871310444 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__nodatum 3.823527512963466 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_.S_bacterium_HMT_075 3.359069846152081 Male_Diseased_21_days 3.068137900421832 0.01497761738557588 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum 3.087112574175582 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_129 2.058534095050931 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_mirabilis 4.195658846301187 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_australis 3.3149138272518615 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_145 3.2458075076179798 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_937 2.86494760448328 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_saburreum 3.611719651399331 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_flueggei 2.721745015134276 Male_Diseased_21_days 2.4791032798150336 0.02259343112029504 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_896 3.774328546281004 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_132 2.806108194926506 Male_Diseased_21_days 2.5054898139171256 0.007288486259105756 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_granulosa 3.8243014105275024 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_221 2.4347168742922936 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flavescens 3.9462269961803904 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_haemolysans 3.626071939821541 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_showae 3.6299053513844264 Male_Diseased_21_days 3.2498595685370595 0.017326820479881797 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_513 3.268766498178957 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_parasanguinis_clade_411 2.14890997749026 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_257 2.574504329394245 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_.S_bacterium_HMT_274 3.9199161865212524 Male_Diseased_21_days 3.3785365168356933 0.0076345364504380115 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_479 1.7946644984541917 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_elegans 2.0930367071589835 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_maculosa 3.1258552061701277 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_412 1.8303056291837663 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_335 3.377397042446664 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_chosunense 3.2235985752468226 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_vespertina 1.5429388943578664 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_valvarum 3.5125802780197017 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia.S_exigua 2.8010652783044248 Male_Diseased_21_days 2.3453446807847182 0.018771007629545707 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_diversum 3.01858501545845 Male_Diseased_21_days 2.5678941541141422 0.02907470182481002 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_micra 4.152860156767246 Male_Diseased_21_days 3.7336162178588794 0.01897897637687845 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroidaceae__G_1_.S_bacterium_HMT_272 3.038604362352611 Male_Diseased_21_days 2.6739646675644413 0.010901804694539581 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_900 2.8543590036301754 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sicca 4.256229159505073 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_373 2.712548624580986 Male_Diseased_21_days 2.455837834583846 0.008016443034420282 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_475 2.451863186454223 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_denticola 3.575941305828645 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_525 4.138269210368899 Male_Diseased_21_days 3.5859161597450186 0.009155875736544479 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_392 3.850586133950658 Male_Diseased_21_days 3.542023549949428 0.044991811503867433 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_349 3.5569075515854256 Male_Diseased_21_days 2.972526419999969 0.018275241881670654 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_ochracea 2.311038296402385 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_150 2.672145508753779 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_sp__HMT_451 3.060722168149487 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Centipeda.S_periodontii 2.6143505252547024 Male_Diseased_21_days 2.500775024575461 0.01699960480523022 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_.S_bacterium_HMT_096 2.8586085229924105 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_gingivalis 2.34370856769896 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_897 3.9203173434680063 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_225 3.628035927418431 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_346 4.045187095021485 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_472 3.4259507296354386 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_segnis 3.021309223694579 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_sp__HMT_166 3.6142551785324395 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia.S_satelles 2.2502152993947266 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_362 3.8376140233176663 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_277 2.2375714956484005 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_wadei 3.7378546961273105 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_808 3.0862038588131977 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_.S_bacterium_HMT_439 2.9664804041120907 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_155 2.6253434967219986 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_anginosus 3.9638922193566923 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_292 2.7989039754165566 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_892 2.7941185038099188 Male_Diseased_21_days 2.637441986264638 0.009726277762920172 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hofstadii 3.602154215453443 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_323 2.931600676737708 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum 3.523600509216636 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_buccalis 4.491154090486229 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_481 2.675766786597454 Male_Diseased_21_days 2.338503223749262 0.04441455298285738 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_baroniae 2.353967648385076 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_medium 2.9953092634725977 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mitis 3.4629593574941087 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_511 3.146464391846695 Male_Diseased_21_days 2.577132243879314 0.03829660388536767 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_146 1.9603866022266863 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_morbi 3.6643331262765884 Male_Diseased_21_days 3.201972072724164 0.008663678247986356 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_347 2.324631061353126 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_nigrescens 3.877441420300034 Male_Diseased_21_days 3.3525015430997627 0.0417775705693277 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_melaninogenica 3.6037664116101573 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola 3.8058335044411415 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_268 2.099050758203103 Male_Diseased_21_days 2.620127063926491 0.009817287701835192 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_ignava 3.240975060273957 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_064 2.916501597676661 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_adiacens 4.13347057967289 Male_Diseased_Baseline 3.7402198908129822 0.005131230451189013 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_314 3.5912953853434604 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_vestibularis 1.077348621539722 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_877 3.4316440432612194 Male_Diseased_21_days 3.0516721125635233 0.0351870871310444 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_914 0.5016411939485973 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_salivarius 2.70411579828232 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_gingivalis 4.56328245921724 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix 3.409403344091575 Male_Diseased_21_days 3.0789774901204225 0.0016632045028204911 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_goodfellowii 3.0499246192757847 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__dentisani_clade_398 0.0 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_dentocariosa 4.071202251809899 Male_Diseased_Baseline 3.6905710493633324 0.01030722351630218 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_458 3.109647710351241 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_constellatus 4.016114019751235 Male_Diseased_21_days 3.5900057630881803 0.023481922530024606 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_endodontalis 2.8950892930818566 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175 3.68229730558449 Male_Diseased_Baseline 3.2633885240712153 0.043594834841845675 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_loescheii 3.0552372760271527 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_247 3.423740598816747 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_elongata 3.6534186485753573 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_902 2.575938564326629 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_sanguinis 2.4601361637067414 Male_Diseased_Baseline 2.7401115600500137 0.0004196127474468251 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_aphrophilus 3.6117595249341865 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_paraphrophilus 2.199044550443801 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_serpentiformis 2.969931006812077 Male_Diseased_21_days 2.6572859294228364 0.043470244099684564 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_micronuciformis 2.7367643565243744 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_423 4.566378032220314 Male_Diseased_Baseline 4.228474339795051 0.002096454009687638 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor.S_alocis 4.041799084731883 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_timonensis 2.6593528593511033 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_.S_bacterium_HMT_081 1.9090222046552323 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_110 3.869437386489249 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_.S_bacterium_HMT_351 2.8561039687252765 Male_Diseased_21_days 2.4613572979694003 0.00455573142536654 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum 4.7448636349858635 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sp__HMT_018 3.797709480395351 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_218 1.709807251948832 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_canifelinum 3.1106633106148416 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_dentalis 2.9147885015720223 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_203 3.6611266069764508 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium.S_curtum 2.083586704712431 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus_clade_578 4.083801113226634 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_longum 3.519820054085733 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_951 2.7049545635946144 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_.S__Eubacterium__saphenum 3.640049279404313 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flava 4.159910286696869 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_898 1.7854700359495972 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_sp__HMT_807 3.8114303724716327 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii 4.468704887516237 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pallens 2.039783896685496 Male_Diseased_21_days 2.455794494698918 0.03145521066444861 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_.S_bacterium_HMT_085 2.4454795956298008 Male_Diseased_21_days 2.5054395254118065 0.0061419877575541884 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_234 2.5804988711313204 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_919 2.5871502858472852 Male_Diseased_21_days 2.525690535301521 0.013460421998445016 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium.S_moorei 3.1125585275598127 Male_Diseased_21_days 2.692891860917592 0.04743689282486531 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_301 2.290873962599883 Male_Diseased_21_days 2.5540483244751147 0.019746365853949812 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_buccae 2.646828224695688 Male_Diseased_21_days 2.508861821339969 0.0029284044575048893 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia.S_defectiva 3.6086657561294477 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_204 3.2095508262309314 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_253 1.8101448825876736 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_odontolytica 3.6054047762884376 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_denitrificans 2.578455608362379 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_massiliensis 3.9814134344438377 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_338 3.037832831048347 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia 3.8424132708529135 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_315 2.1521590406133324 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_jejuni 1.0858035060379643 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_238 2.6408719383698136 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_957 3.1982524771644165 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_348 3.756177537233188 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_361 3.226304052050415 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_dentium 2.6682076634312493 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_910 1.071554757701953 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_324 2.3291375894877606 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_uli 3.0681294212181354 Male_Diseased_21_days 2.7461854186329595 0.02473085709913828 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oricola 2.042930901395582 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_336 3.0183993907526503 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia 4.0820218957133765 Male_Diseased_21_days 3.4664706379468053 0.02466040192804644 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_intermedius 3.89133456955913 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_lecithinolyticum 3.316604479791187 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_marshii 1.9433328352724393 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_.S_bacterium_HMT_872 2.4480765512217233 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sinensis 2.976898463386146 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_pasteri 3.006711175116089 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_bacilliformis 3.077327365475884 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_8_.S_bacterium_HMT_955 1.7480873911572197 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_3_.S_bacterium_HMT_495 2.769337023292429 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilaceae__G_1_.S_bacterium_HMT_113 2.7503552972890555 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_goodfellowii 2.8077104098124166 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_7_.S_bacterium_HMT_086 2.285198169741619 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_380 2.8339165080292283 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus.S_caprae 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_mucosa 3.3439802849666895 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_timidum 3.5726664862649224 Male_Diseased_21_days 3.1565928240580114 0.01485417047629776 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_desulfuricans 2.8671888977736493 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_070 3.343817381259063 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_artemidis 3.0122301411038555 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_089 2.5456660561056728 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_.S__Eubacterium__brachy 3.974823157710121 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia.S_sp__HMT_894 3.898286628255352 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_135 3.1665056053315106 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_oralis 3.0707984592807547 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_salivae 3.1753859336223256 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_345 2.9616237390418703 Male_Diseased_21_days 2.709723803432427 0.0005359222922953463 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_874 3.136211757097606 Male_Diseased_21_days 2.875018488952094 0.007853381229026752 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_haemolytica 2.3102309959995115 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_sp__HMT_183 4.412617562001338 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia.S_wiggsiae 1.5326583236764268 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_417 3.9217078170918347 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_414 3.970383272989474 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis 3.5976939221717212 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__vincentii 4.246847316991062 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091 2.7234565266476864 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__minutum 2.9395093450783416 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_cardiffensis 3.506687221423037 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Propionibacteriaceae.G_Cutibacterium.S_acnes 4.594191197543818 Male_Diseased_Baseline 4.259956753500799 0.03130125999812186 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_.G_Bacteroidetes__G_6_.S_bacterium_HMT_516 3.667512295111732 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pleuritidis 3.5506039880790783 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S_stomatis 2.7158110868961054 Male_Diseased_21_days 2.472580126736389 0.04055533284933647 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_bacterium_HMT_369 3.1281044481681164 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_vincentii 2.7524814858022544 Male_Diseased_21_days 2.577894625124217 0.03145521066444861 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_sp__HMT_012 1.4421894190303486 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_304 1.6608630617473386 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multiformis 2.9352650642595255 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter.S_alactolyticus 2.079266491012854 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_.S_bacterium_HMT_905 2.56802792084805 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_071 3.3001077285024443 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_aeria 4.390318227900148 Male_Diseased_Baseline 3.9889812657208306 0.02768982457669229 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_.S_bacterium_HMT_356 3.794470510674862 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oralis 2.922094114961945 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_863 3.1184411748843313 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_920 2.7919239973878867 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_mucilaginosa 2.966998313309498 Male_Diseased_Baseline 2.6928093716036976 0.041802806468520706 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_micans 2.826507070382304 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_448 3.2641688170991143 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284 1.6748485002757183 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S__Eubacterium_yurii 2.9464038049304953 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_376 2.3568010514578486 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_shahii 3.09610639568651 Male_Diseased_21_days 2.9187018854213123 0.02896162374848476 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_875 1.986518132947059 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_170 4.434696593632828 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_909 2.861307712336106 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus.S_salivarius 0.0 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium.S_acidifaciens 0.7387128061095514 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_286 3.5796008325829853 Male_Diseased_21_days 3.283836760182446 0.04441455298285738 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_johnsonii 3.3763675481209763 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137 2.64661175766374 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_256 2.922532787034991 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_georgiae 3.4678783533724586 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_463 2.9139602489942655 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma.S_faucium 2.5657589549332296 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella.S_sp__HMT_521 0.8237239267250784 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_167 3.493167744674364 Male_Diseased_21_days 3.026488659342986 0.00944327847422155 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Colibacter.S_massiliensis 1.6471351652017008 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_869 2.6179025444495307 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__animalis 3.5031421695689753 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_2_.S_bacterium_HMT_350 2.6072919609052856 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium.S_sp__HMT_199 0.0 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis 4.098699645632188 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacteriaceae__G_1_.S_bacterium_HMT_915 3.3555086697118424 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_saccharolytica 3.1712736685041936 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_peroris 2.6980010615053756 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_trevisanii 2.4402406701199784 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_dentalis 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_168 2.251354918398958 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_280 3.002029233959138 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_tannerae 3.979022230202764 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis 2.851509654720749 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii 4.1701590906567585 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_gracilis 3.757868729421085 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_meyeri 2.9263575948864036 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_370 2.9823734866493607 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_maltophilum 3.419811220421816 Male_Diseased_21_days 2.960419328134427 0.0017980695569900734 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_.S__Eubacterium__infirmum 2.9576966458790923 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_propionica 4.2686604555450645 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_359 3.7852732053428695 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_056 2.8485581130375004 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_downii 3.3053317391276997 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_endodontalis 4.260715592159416 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_393 0.4436492469709105 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_denticola 3.94938285119569 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus.S_geminatus 3.14072476128913 Male_Diseased_21_days 2.812787791104376 0.0160765123149371 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_526 2.062410001537421 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_parvula 3.58316905626558 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_332 3.4841826975845867 Male_Diseased_21_days 3.241956437481854 0.0351870871310444 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris 4.1433848013093115 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mutans 1.7648534807377882 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis 4.144331609631924 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae 3.4209097015054435 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300 3.3180459754571032 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_atypica 2.8768558316439323 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_hwasookii 3.67451646491473 Male_Diseased_21_days 3.2918351285181466 0.04141418566772715 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_473 2.7339042604362263 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_gordonii 4.255844471248808 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sanguinis 4.371158990908046 Male_Diseased_Baseline 3.8760074237081503 0.01673994478608386 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_212 3.5249732244667222 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_periodonticum 3.5381279666782337 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_215 3.038603239870925 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_231 2.9659300351933937 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_haemolyticus 2.1175771887969406 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_949 2.5436438505577246 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_concisus 2.8531347413203187 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_083 2.1014625821399666 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_dianae 3.4089537242751344 Male_Diseased_21_days 3.0310507568045066 0.0014427181824476865 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_275 2.9356582493149266 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_96_838 3.3354445903884073 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis_nov_97_510 3.0449366188184817 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis_nov_97_959 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae_nov_97_951 3.1100757257724734 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_94_882 2.8770189784399083 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_769 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_481_nov_97_822 3.048277471975162 Male_Diseased_21_days 2.7160227150543186 0.0004196127474468251 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Hoppeia.S_youngheungensis_nov_80_457 2.5705855145810883 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171_nov_96_813 3.0731814051318063 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300_nov_97_955 2.065749471066833 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_897_nov_97_769 3.1005162672384166 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_legallii_nov_94_343 3.4661941438282535 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia_nov_97_308 3.2695785355612577 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia.S_sanguinegens_nov_90_578 2.947322921073294 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_88_613 3.0139506625141177 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum_nov_97_484 2.554082724812154 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175_nov_97_751 1.6168577873115069 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_348_nov_95_089 3.3888723894367696 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_955 2.6722216108548835 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis_nov_97_536 1.944182529177724 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales.F_Tepidisphaeraceae.G_Tepidisphaera.S_mucosa_nov_92_461 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix_nov_97_822 2.847903047937042 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii_nov_97_963 2.4490881811475322 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris_nov_97_131 1.0609492048556097 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_96_218 2.7327593825432865 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284_nov_97_541 2.096004204575948 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137_nov_97_228 1.0899918161298476 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169_nov_97_992 2.9819224831376903 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis_nov_88_843 3.2878246436232237 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola_nov_96_920 3.2714875415404174 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum_nov_89_452 1.005902029937301 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_.F_Alphaproteobacteria__F_1_.G_Micavibrio.S_aeruginosavorus_nov_86_105 2.56310048358084 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis_nov_97_988 1.6328847614026234 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae.G_Propionivibrio.S_dicarboxylicus_nov_93_802 2.349754182174268 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_927_nov_91_411 2.980438807349998 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae.G_Schnuerera.S_ultunensis_nov_84_696 3.0220298213924592 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_zoohelcum_nov_92_798 0.3912144656560133 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_96_933 3.0890860921688237 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_97_642 2.7235200742500836 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_97_899 3.0514795746833623 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_146_nov_97_250 1.0989414146339536 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster.S_bolteae_nov_88_494 2.913287642415685 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_225_nov_96_522 3.2226749117019278 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_443_nov_97_955 1.731595724501193 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_475_nov_97_947 1.6361860696359984 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_gordonii_nov_97_018 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Brachymonas.S_denitrificans_nov_92_213 2.489724879548907 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091_nov_96_653 2.7609145710835192 Male_Diseased_21_days 2.481052851280571 0.028670117248260196 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_96_634 1.6359663465451693 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sp__HMT_078_nov_92_917 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137_nov_95_842 1.8630556206274056 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_97_605 3.5323699588687236 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_951 3.3400469238831696 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_vespertina_nov_97_551 3.3111055905670415 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175_nov_97_746 3.138012397255353 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_multispecies_spp13_2 4.210016447459129 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_multispecies_spp2_2 2.3086140513321025 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp20_2 0.0 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_multispecies_spp23_2 3.062281817090149 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp31_2 2.0042176218575083 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp33_2 1.6921720981188868 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_multispecies_spp38_2 3.3455103219275797 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae.G_Bradyrhizobium.S_multispecies_spp39_3 3.9256541208125655 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_spp42_2 3.1452350562639717 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_multispecies_spp46_2 2.9865822302033553 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_multispecies_spp47_2 2.690573005806573 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp5_2 2.3382685387701785 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp51_2 1.893771161538714 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_multispecies_spp52_2 3.2709729646054106 Male_Diseased_21_days 2.6831410749681592 0.018207880976668925 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_multispecies_sppn10_2_nov_97_239 2.637954933030771 Male_Diseased_21_days 2.5501777457522206 0.013448460388924671 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_multispecies_sppn14_2_nov_97_536 3.029250406906561 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_sppn17_3_nov_97_845 2.7109774098182893 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Cohnella.S_multispecies_sppn18_2_nov_92_000 0.0 - K_Bacteria 5.999999999999999 - K_Bacteria.P_Proteobacteria 5.1446712218612785 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria 4.667983234412298 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales 4.578454498785542 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae 4.578454498785542 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus 4.528549601001784 - K_Bacteria.P_Synergistetes 4.502457498865926 - K_Bacteria.P_Synergistetes.C_Synergistia 4.502457498865926 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales 4.502457498865926 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae 4.502457498865926 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium 4.502457498865926 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria 4.856736279088125 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales 4.73407103113141 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae 4.73407103113141 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella 3.4462648521466877 Male_Diseased_Baseline 3.099852582239339 0.0089282067898789 K_Bacteria.P_Firmicutes 5.405879345314583 - K_Bacteria.P_Firmicutes.C_Bacilli 5.22104323730146 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales 5.1920157196595245 Male_Diseased_Baseline 4.629640551037087 0.046963044043994366 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae 5.139522127374371 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus 5.139522127374371 - K_Bacteria.P_Firmicutes.C_Clostridia 5.080207335722604 Male_Diseased_21_days 4.37094679669241 0.024070170858871556 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales 4.996297957327167 Male_Diseased_21_days 4.410497869480968 0.007065523169908331 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_ 4.3808875811388965 Male_Diseased_21_days 3.622377046777106 0.03997793327810672 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum 3.8012641886558876 - K_Bacteria.P_Fusobacteria 5.211677178770369 Male_Diseased_21_days 4.544679653036766 0.003779843969458946 K_Bacteria.P_Fusobacteria.C_Fusobacteriia 4.845717188150728 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales 4.845717188150728 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae 4.845717188150728 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia 4.840572994863154 - K_Bacteria.P_Actinobacteria 5.521952453777361 Male_Diseased_Baseline 4.912356162979064 0.0019496220685037828 K_Bacteria.P_Actinobacteria.C_Actinobacteria 4.889776194175844 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales 4.437493380861844 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae 4.437493380861844 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia 4.399958785342635 - K_Bacteria.P_Bacteroidetes 5.385973862275254 Male_Diseased_21_days 4.772678388154498 0.0005239758942356329 K_Bacteria.P_Bacteroidetes.C_Bacteroidia 5.3113179703009985 Male_Diseased_21_days 4.788775455794501 0.00021231612360435222 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales 5.3113179703009985 Male_Diseased_21_days 4.788775455794501 0.00021231612360435222 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 5.044957115210254 Male_Diseased_21_days 4.50284928082075 0.010495770430781327 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella 4.023090633876241 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales 4.7000099539045515 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae 4.7000099539045515 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia 4.248149919195599 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_ 4.722770920041738 Male_Diseased_21_days 4.217750384589301 0.015335137038007369 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus 3.810778075914576 Male_Diseased_21_days 3.4821007071333994 0.013560559068111818 K_Bacteria.P_Firmicutes.C_Negativicutes 4.659792120810791 Male_Diseased_21_days 4.1500458710798425 0.0012271722863991072 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales 4.516934169805378 Male_Diseased_21_days 4.028923158182296 0.0006717744008193858 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae 4.516934169805378 Male_Diseased_21_days 4.028923158182296 0.0006717744008193858 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas 4.511375717776588 Male_Diseased_21_days 4.02186319234875 0.0006717744008193858 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia 4.636927019317454 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales 4.636927019317454 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 4.636927019317454 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga 4.6206033963544035 - K_Bacteria.P_Actinobacteria.C_Actinomycetia 5.3934783557345325 Male_Diseased_Baseline 4.7732112153248565 0.022039925783291673 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales 5.248910855765607 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae 5.140196040117939 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces 5.140196040117939 - K_Bacteria.P_Saccharibacteria__TM7_ 4.432347634832109 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_ 4.432347634832109 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_ 4.432347634832109 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_ 4.3922818866902205 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_4_ 2.883010410299388 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella 5.001562642387257 Male_Diseased_21_days 4.452482677156776 0.012712992909160573 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales 4.033764446991753 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae 4.033764446991753 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella 4.033764446991753 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium 3.5238845562121304 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales 4.119974917062423 Male_Diseased_21_days 3.677270173016576 0.0010813846328810606 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae 4.06662819590749 Male_Diseased_21_days 3.6483819756487903 0.0019212127697514983 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_ 3.6637946232071945 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_ 3.4671887689527963 Male_Diseased_21_days 2.951287909456722 0.03628688880285449 K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria 3.7093867141208823 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales 3.648542121978514 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae 3.648542121978514 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus 3.648542121978514 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria 4.6723038153153365 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum 3.6348895162508317 Male_Diseased_21_days 3.1863137608068564 0.007116399613802106 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae 4.926747877085641 Male_Diseased_21_days 4.4381874094925475 0.000857596243741295 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella 4.347417928623983 Male_Diseased_21_days 3.814470988095528 0.0005145640642726691 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales 4.107439490988508 Male_Diseased_21_days 3.5796948406309523 0.010387827093251315 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae 4.107439490988508 Male_Diseased_21_days 3.5796948406309523 0.010387827093251315 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister 3.7380744314699577 Male_Diseased_21_days 3.2375062475348906 0.02500992240797771 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter 3.9803206121906958 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella 3.2038230157946597 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas 4.793960179704633 Male_Diseased_21_days 4.320399809228984 0.004208455938996178 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio 3.1851936934960947 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_ 2.5621394581962194 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes 4.352605437020842 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae 4.352605437020842 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella 4.352605437020842 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella 3.642703147673552 - K_Bacteria.P_Spirochaetes 4.548989782296614 Male_Diseased_21_days 3.9126006832499445 0.024070170858871556 K_Bacteria.P_Spirochaetes.C_Spirochaetia 4.548989782296614 Male_Diseased_21_days 3.9126006832499445 0.024070170858871556 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales 4.548989782296614 Male_Diseased_21_days 3.9126006832499445 0.024070170858871556 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae 4.548989782296614 Male_Diseased_21_days 3.9126006832499445 0.024070170858871556 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema 4.548989782296614 Male_Diseased_21_days 3.9126006832499445 0.024070170858871556 K_Bacteria.P_Actinobacteria.C_Coriobacteriia 4.076935246116095 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales 4.072502731849963 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae 4.048611546944442 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella 3.5485957988347687 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia 3.8076708102337746 Male_Diseased_21_days 3.434064213431123 0.032344633152900794 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales 3.8076708102337746 Male_Diseased_21_days 3.434064213431123 0.032344633152900794 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae 3.8076708102337746 Male_Diseased_21_days 3.434064213431123 0.032344633152900794 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Eggerthia 3.7097909886926117 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_ 3.5331273179607168 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_ 3.4573246764712113 Male_Diseased_21_days 2.8505972668947757 0.045399905965691 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_ 3.4573246764712113 Male_Diseased_21_days 2.8505972668947757 0.045399905965691 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_ 3.4573246764712113 Male_Diseased_21_days 2.8505972668947757 0.045399905965691 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_ 3.165907376576189 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria 3.9675875640266347 Male_Diseased_21_days 3.1902361004938666 0.012650614142324986 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales 3.9675875640266347 Male_Diseased_21_days 3.1902361004938666 0.012650614142324986 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae 3.9675875640266347 Male_Diseased_21_days 3.1902361004938666 0.012650614142324986 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter 3.9675875640266347 Male_Diseased_21_days 3.1902361004938666 0.012650614142324986 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_ 3.876840959472922 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae 3.409068131241492 Male_Diseased_21_days 3.103049281816311 0.02261379927078348 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_ 3.359069846152081 Male_Diseased_21_days 3.0670684656115044 0.01497761738557588 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales 4.515709060581739 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae 4.515709060581739 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium 4.515709060581739 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_ 3.7647495596420932 Male_Diseased_21_days 3.303984973251547 0.006291605526040641 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales 4.245433765150654 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae 4.195658846301187 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia 4.195658846301187 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_ 3.9199161865212524 Male_Diseased_21_days 3.3785365168356933 0.0076345364504380115 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_ 3.9199161865212524 Male_Diseased_21_days 3.3785365168356933 0.0076345364504380115 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae 4.1352684336658205 Male_Diseased_Baseline 3.736661392149156 0.005131230451189013 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella 4.1352684336658205 Male_Diseased_Baseline 3.736661392149156 0.005131230451189013 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales 3.9381657396699747 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae 3.9381657396699747 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium 3.9381657396699747 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae 2.8010652783044248 Male_Diseased_21_days 2.3409105320816517 0.018771007629545707 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia 2.8010652783044248 Male_Diseased_21_days 2.341804474271322 0.018771007629545707 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium 3.6796056169422173 Male_Diseased_21_days 3.1869591475547208 0.004689566957169442 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae 4.215926757303101 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas 4.200799700917474 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 3.038604362352611 Male_Diseased_21_days 2.6741365451695263 0.010901804694539581 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroidaceae__G_1_ 3.038604362352611 Male_Diseased_21_days 2.678754935324982 0.010901804694539581 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_ 4.3513907821112 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella 3.760933388717456 Male_Diseased_21_days 3.318610825015056 0.003351054863094316 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Centipeda 2.6143505252547024 Male_Diseased_21_days 2.502723710890362 0.01699960480523022 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_ 2.8586085229924105 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella 3.6522084165708604 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia 2.2502152993947266 - K_Bacteria.P_Chloroflexi 2.9664804041120907 - K_Bacteria.P_Chloroflexi.C_Anaerolineae 2.9664804041120907 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales 2.9664804041120907 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae 2.9664804041120907 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_ 2.9664804041120907 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_ 3.146464391846695 Male_Diseased_21_days 2.5639229400341157 0.03829660388536767 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga 4.533043640340146 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales 4.57139963823753 Male_Diseased_Baseline 4.175919707264593 0.0027209165081254205 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae 4.57139963823753 Male_Diseased_Baseline 4.175919707264593 0.0027209165081254205 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia 4.57139963823753 Male_Diseased_Baseline 4.175919707264593 0.0027209165081254205 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera 2.7367643565243744 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor 4.041799084731883 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_ 2.8561039687252765 Male_Diseased_21_days 2.457004291900112 0.00455573142536654 K_Bacteria.P_Fusobacteria.C_Fusobacteria 4.967120363970426 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales 4.967120363970426 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae 4.967120363970426 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium 4.967120363970426 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales 2.083586704712431 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae 2.083586704712431 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium 2.083586704712431 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_ 3.640049279404313 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella 3.8835302912362364 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_ 2.4454795956298008 Male_Diseased_21_days 2.521014497941481 0.0061419877575541884 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium 3.1125585275598127 Male_Diseased_21_days 2.6931611493943937 0.04743689282486531 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae 3.6086657561294477 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia 3.6086657561294477 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales 2.6988842065619143 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae 2.6988842065619143 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium 2.6682076634312493 - K_Bacteria.P_Gracilibacteria__GN02_ 2.4480765512217233 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_ 2.4480765512217233 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_ 2.4480765512217233 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_ 2.4480765512217233 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_ 2.4480765512217233 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_8_ 1.7480873911572197 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_3_ 2.769337023292429 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilaceae__G_1_ 2.7503552972890555 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia 2.8077104098124166 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_7_ 2.285198169741619 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Staphylococcaceae.G_Staphylococcus 0.0 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales 3.5637168272294266 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae 3.5637168272294266 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio 3.5637168272294266 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_ 3.974823157710121 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae 3.9086732388780914 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia 3.898286628255352 - K_Bacteria.P_Absconditabacteria__SR1_ 3.3767167659079567 Male_Diseased_21_days 3.0841991782674323 0.0029731547314537205 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_ 3.3767167659079567 Male_Diseased_21_days 3.0856403078175676 0.0029731547314537205 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_ 3.3767167659079567 Male_Diseased_21_days 3.086752865378837 0.0029731547314537205 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_ 3.3767167659079567 Male_Diseased_21_days 3.0850742644239904 0.0029731547314537205 K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_ 3.3767167659079567 Male_Diseased_21_days 3.0841434489900657 0.0029731547314537205 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia 1.5326583236764268 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_ 3.0436192655230077 Male_Diseased_21_days 2.681324013423131 0.01448766004737895 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Propionibacteriaceae 4.594191197543818 Male_Diseased_Baseline 4.253528496074566 0.03130125999812186 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Propionibacteriaceae.G_Cutibacterium 4.594191197543818 Male_Diseased_Baseline 4.281838784987241 0.03130125999812186 K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_ 3.667512295111732 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_ 3.667512295111732 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_ 3.667512295111732 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_2_.O_Bacteroidetes__O_2_.F_Bacteroidetes__F_2_.G_Bacteroidetes__G_6_ 3.667512295111732 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae 3.1472653952416936 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter 3.1472653952416936 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_ 3.5064172779125826 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae 2.079266491012854 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter 2.079266491012854 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi 2.56802792084805 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales 2.56802792084805 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae 2.56802792084805 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_ 2.56802792084805 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_ 3.794470510674862 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_ 3.794470510674862 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus 0.0 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales 0.7387128061095514 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae 0.7387128061095514 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium 0.7387128061095514 - K_Bacteria.P_Firmicutes.C_Mollicutes 2.5657589549332296 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales 2.5657589549332296 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae 2.5657589549332296 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma 2.5657589549332296 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella 0.8237239267250784 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae 3.517367741074748 Male_Diseased_21_days 3.061423944526133 0.011629358714935437 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus 3.517367741074748 Male_Diseased_21_days 3.061423944526133 0.011629358714935437 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Colibacter 1.6471351652017008 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_2_ 2.6072919609052856 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium 0.0 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacteriaceae__G_1_ 3.3555086697118424 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_ 2.9576966458790923 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus 3.14072476128913 Male_Diseased_21_days 2.8140145743911424 0.0160765123149371 K_Bacteria.P_Bacteroidota 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 2.5705855145810883 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Hoppeia 2.5705855145810883 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia 2.947322921073294 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora 3.0139506625141177 - K_Bacteria.P_Planctomycetota 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales.F_Tepidisphaeraceae 0.0 - K_Bacteria.P_Planctomycetota.C_Phycisphaerae.O_Tepidisphaerales.F_Tepidisphaeraceae.G_Tepidisphaera 0.0 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria 3.9441031494547767 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_ 2.56310048358084 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_.F_Alphaproteobacteria__F_1_ 2.56310048358084 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Alphaproteobacteria__O_1_.F_Alphaproteobacteria__F_1_.G_Micavibrio 2.56310048358084 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales 2.349754182174268 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae 2.349754182174268 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Rhodocyclales.F_Rhodocyclaceae.G_Propionivibrio 2.349754182174268 - K_Bacteria.P_Firmicutes.C_Tissierellia 3.0220298213924592 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales 3.0220298213924592 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae 3.0220298213924592 - K_Bacteria.P_Firmicutes.C_Tissierellia.O_Tissierellales.F_Tissierellaceae.G_Schnuerera 3.0220298213924592 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Enterocloster 2.913287642415685 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Brachymonas 2.489724879548907 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales 3.9256541208125655 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae 3.9256541208125655 - K_Bacteria.P_Proteobacteria.C_Alphaproteobacteria.O_Rhizobiales.F_Bradyrhizobiaceae.G_Bradyrhizobium 3.9256541208125655 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Paenibacillaceae.G_Cohnella 0.0 -