taxon lfc_(Intercept) lfc_Group006B Final -PMA se_(Intercept) se_Group006B Final -PMA W_(Intercept) W_Group006B Final -PMA p_(Intercept) p_Group006B Final -PMA q_(Intercept) q_Group006B Final -PMA diff_(Intercept) diff_Group006B Final -PMA passed_ss_(Intercept) passed_ss_Group006B Final -PMA Streptococcus sp._HMT_057 (SP103) -0.0164125963895639 -0.392764535048528 0.162314380299174 0.233674157303753 -0.101116095562898 -1.68082144632696 0.920178907228023 0.103921464531428 1 1 FALSE FALSE FALSE TRUE Eikenella corrodens (SP104) -0.386284768439247 0.236987890100892 0.256330349281044 0.326326209191455 -1.50698022892217 0.726230022063141 0.142274607692392 0.473326208291865 1 1 FALSE FALSE TRUE TRUE Lautropia mirabilis (SP106) 0.0198315522038339 -0.0908167007706157 0.145184288715134 0.248769361730832 0.136595718306307 -0.365063849256803 0.892233615156182 0.717542681867004 1 1 FALSE FALSE TRUE TRUE Veillonella tobetsuensis (SP107) -0.434875317303902 0.240761501322853 0.100321731930877 0.169639245222555 -4.33480671569283 1.41925590983967 0.00017024913313261 0.166861761434527 0.0148116745825371 1 TRUE FALSE FALSE TRUE Schaalia sp._HMT_180 (SP109) -0.0589888982038086 -0.0172651136747899 0.104715654370282 0.190556655160227 -0.563324543579889 -0.0906035722566221 0.576706094388997 0.928309843526874 1 1 FALSE FALSE TRUE TRUE Aggregatibacter segnis (SP111) -0.0316137576777609 -0.184712515093672 0.154524768369307 0.217207297032446 -0.204586992825677 -0.850397374385076 0.839276519737325 0.401840616264484 1 1 FALSE FALSE FALSE TRUE Prevotella melaninogenica (SP120) 0.259541309420671 -0.861074784437084 0.19577521844593 0.298811349397494 1.32571073847302 -2.88166693190638 0.196922626070911 0.00800870564873984 1 0.620944196716326 FALSE FALSE TRUE FALSE Fusobacterium hwasookii (SP127) -0.15181876121693 -0.467340546303396 0.138809377928993 0.205416678687303 -1.09372121309118 -2.27508569065518 0.293929699861541 0.0404856643679451 1 1 FALSE FALSE FALSE FALSE Fusobacterium periodonticum (SP130) 0.531775880486325 -0.935032892012731 0.239633358623351 0.327594287927423 2.21912292821533 -2.85424052393699 0.0326917667115449 0.00702801821216608 1 0.555213438761121 FALSE FALSE FALSE FALSE Aggregatibacter sp._HMT_458 (SP136) -0.173670563914755 -0.257893279955791 0.136781841112757 0.200199235859972 -1.26969020523411 -1.28818313840205 0.221301087300067 0.214940449560146 1 1 FALSE FALSE FALSE TRUE Haemophilus parainfluenzae (SP14) -0.251769805788523 0.803600168409102 0.31883719608332 0.451527053636039 -0.789650043600087 1.77973869325859 0.434275379478182 0.0825316831834725 1 1 FALSE FALSE TRUE TRUE Streptococcus gordonii (SP144) 0.133022212678108 -0.156628218623005 0.20792330827967 0.272746761269553 0.639765756800985 -0.574262432646123 0.526266734441198 0.569265315376515 1 1 FALSE FALSE FALSE TRUE Neisseria elongata (SP145) -0.210969864934608 -0.0874618191489862 0.134197403839207 0.244584286094388 -1.57208603817246 -0.35759377900195 0.126778659445657 0.723236825769325 1 1 FALSE FALSE TRUE TRUE Streptococcus infantis_clade_431 (SP148) -0.11009804277876 -0.139049330757733 0.170211059929226 0.24054797105268 -0.646832484472744 -0.578052394909955 0.522501268567139 0.567404497253675 1 1 FALSE FALSE TRUE TRUE Haemophilus haemolyticus (SP163) -0.129568208044886 -0.454806018085583 0.0971193210152019 0.187715938650639 -1.33411361087054 -2.42284177547667 0.199764279630652 0.0268547949281738 1 1 FALSE FALSE TRUE FALSE Haemophilus pittmaniae (SP169) -0.453071513708051 0.270755415278241 0.163885763638264 0.253076927460792 -2.76455686967473 1.06985420597137 0.0110309505254281 0.295784572066132 0.761135586254539 1 FALSE FALSE FALSE TRUE Streptococcus australis (SP17) 0.0254855429784361 -0.214950833149021 0.213547936922838 0.289317512388002 0.11934342867309 -0.742958251558418 0.905685673609066 0.462464904969895 1 1 FALSE FALSE TRUE TRUE Lancefieldella parvula (SP174) -0.138972439319768 -0.0769198120390648 0.122717228515194 0.195869551548085 -1.13246070662817 -0.392709389647943 0.269109244708191 0.698150121276058 1 1 FALSE FALSE FALSE TRUE Salmonella enterica (SP178) 0.636517202810006 0.242165550012572 0.327567312502941 0.469939611473225 1.943164590955 0.515312061593194 0.0628972717900628 0.610688931108944 1 1 FALSE FALSE TRUE TRUE Streptococcus sanguinis (SP179) 0.243449950589611 0.174809704369015 0.227365353829504 0.341161720732052 1.07074339378975 0.512395423478093 0.289639436535741 0.610724137582025 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_473 (SP181) -0.324056499353425 -0.1416905864172 0.100222875408818 0.204151713722198 -3.23335863226406 -0.694045540122221 0.00557001731362443 0.49826235307939 0.401041246580959 1 FALSE FALSE FALSE TRUE Streptococcus chosunense (SP182) 2.67748619184579 -2.07271757583878 0.0775299497194374 0.191954005611896 34.5348629985571 -10.7979907438323 4.4265317592602e-09 1.28692302473198e-05 4.02814390092678e-07 0.00113249226176415 TRUE TRUE FALSE FALSE Enterobacter cancerogenus (SP184) -0.154039442752201 1.70169645313206 0.206520096482981 0.388729295404419 -0.745881129127282 4.3775873679952 0.468078996095909 0.000631489834510144 1 0.0511506765953217 FALSE FALSE TRUE FALSE Haemophilus sp._HMT_036 (SP188) 0.106407477776587 -0.92173665132065 0.127455138851574 0.2065634368352 0.834862201205571 -4.46224494248721 0.416894469483257 0.000456410859591356 1 0.0383385122056739 FALSE TRUE FALSE FALSE Schaalia odontolytica (SP19) 0.464956429767703 -0.29162490456296 0.181714036998203 0.277706281796373 2.55872599304092 -1.05011994210773 0.013714581348697 0.298921475890274 0.932591531711397 1 FALSE FALSE FALSE TRUE Enterobacter asburiae (SP199) -0.417077694961804 2.20022537058442 0.103625964123467 0.189541869649643 -4.0248377758384 11.6081231795983 0.00168474931657854 6.99448637179325e-08 0.128040948059969 6.22509287089599e-06 FALSE TRUE FALSE FALSE Veillonella parvula (SP2) -0.047413406977278 -0.0746281740371724 0.202336879202238 0.303239842972525 -0.23432904156779 -0.246102798714132 0.816134933926256 0.807082360871334 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum gingivalis (SP20) -0.3021509384364 0.222708407871597 0.135425035757448 0.197071703835172 -2.2311305789689 1.13008820412832 0.0403308674255762 0.275096276566736 1 1 FALSE FALSE FALSE TRUE Neisseria subflava (SP200) 0.207964317075987 -0.121322340024405 0.162394250860117 0.256040643545219 1.28061379004804 -0.473840162032628 0.207526689064643 0.638127535018178 1 1 FALSE FALSE TRUE TRUE Rothia dentocariosa (SP201) -0.0871972115142912 0.0361098320155644 0.140996491799178 0.227272528098911 -0.618435327018539 0.158883400108301 0.540181871557602 0.874648739384641 1 1 FALSE FALSE TRUE TRUE Actinomyces sp._HMT_175 (SP205) 0.0229211634943946 0.132924095924712 0.126458678221112 0.221431015237592 0.181254175805294 0.600295743494138 0.857061156423796 0.551613028470902 1 1 FALSE FALSE FALSE TRUE Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP207) -0.235512210301943 0.040115974739566 0.0950572802725504 0.173324163572806 -2.47758203923652 0.231450560110247 0.0277360178130569 0.820567941941588 1 1 FALSE FALSE FALSE TRUE Streptococcus cristatus_clade_578 (SP24) -0.173551959395435 0.0171076980490343 0.187113322952349 0.260312302900282 -0.927523260541058 0.0657198982085288 0.360598403136039 0.948009705028829 1 1 FALSE FALSE TRUE TRUE Streptococcus sp._HMT_066 (SP246) 0.392921196044991 -0.75664728534001 0.10747348647889 0.200549730809135 3.65598259550433 -3.77286612296736 0.000857392924866519 0.000617714409600219 0.0703062198390546 0.0506525815872179 FALSE FALSE FALSE FALSE Streptococcus mitis (SP249) -0.295949477443598 0.0847885296961146 0.189132179261502 0.250357106889393 -1.56477590751178 0.338670352719701 0.128483632939812 0.737298037347819 1 1 FALSE FALSE TRUE TRUE Aggregatibacter sp._HMT_513 (SP252) -0.188562484481533 -0.353866253775753 0.101843260562944 0.178890319426794 -1.85149693204286 -1.97811851926713 0.0797046501868462 0.0626011928744551 1 1 FALSE FALSE TRUE TRUE Citrobacter koseri (SP26) 0.309767327580435 0.948086738119411 0.493828681925356 0.59981458530438 0.627276905773686 1.58063301784884 0.535559897259774 0.125193825713681 1 1 FALSE FALSE TRUE TRUE Campylobacter showae (SP265) 0.110966683443985 -0.472067391920828 0.216652716140118 0.2928840527655 0.512186901789028 -1.6117893325479 0.612037326894726 0.116828649612851 1 1 FALSE FALSE FALSE FALSE Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 0.0620986587566261 0.349729060959721 0.189737478446138 0.272400090909866 0.327287256398605 1.283880118364 0.7450027093309 0.205903812689372 1 1 FALSE FALSE TRUE TRUE Gemella sanguinis (SP285) 0.658855449128568 -0.429366957821174 0.152593364527926 0.264909448228999 4.31772017850745 -1.62080650838097 6.93694811315148e-05 0.110994319828697 0.00610451433957331 1 TRUE FALSE TRUE TRUE Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 0.436428271008569 -0.459147686783196 0.244006427781625 0.314921276734108 1.78859333738189 -1.45797607435353 0.081071132174069 0.152465158715009 1 1 FALSE FALSE FALSE FALSE Veillonella dispar (SP3) -0.358546392305274 0.0976447669504274 0.0925721443122347 0.179087168950474 -3.87315639028454 0.545235973758851 0.000589820951138554 0.589908503255662 0.0489551389444999 1 TRUE FALSE FALSE TRUE Klebsiella aerogenes (SP327) 1.0150779124806 -0.516371505493328 0.227114340871112 0.284002992632715 4.46945758064948 -1.81819036731462 0.00155588232974414 0.102396733830113 0.121358821720043 1 FALSE FALSE FALSE TRUE Enterobacter mori (SP330) -0.669406995402291 3.08949093904157 0.197330320707723 0.257845638163308 -3.39231696883414 11.9819398964772 0.0043793127715163 9.53589719526387e-09 0.31968983232069 8.67766644769012e-07 FALSE TRUE FALSE FALSE Porphyromonas pasteri (SP34) -0.387233100697476 0.250422278856481 0.275212067670124 0.362227742034328 -1.40703532361678 0.691339314460207 0.170044526591128 0.494849956396529 1 1 FALSE FALSE TRUE TRUE Fusobacterium sp._HMT_204 (SP343) 0.298795035742224 -1.10775755627315 0.161039933539446 0.227525350602923 1.85540958180435 -4.86872145603859 0.0809617558562354 0.000144345527214993 1 0.0124137153404894 FALSE TRUE FALSE TRUE Neisseria mucosa (SP346) -0.544847250800976 0.39644662656337 0.0976267998318519 0.186875488253956 -5.58091888435754 2.12144797730035 2.68843797674886e-05 0.048025472330197 0.00239270979930649 1 TRUE FALSE FALSE FALSE Veillonella atypica (SP35) -0.10059990257832 0.0670036677712616 0.211255742785283 0.310304978611737 -0.476199611200949 0.215928432959816 0.636978129812296 0.830333761785689 1 1 FALSE FALSE TRUE TRUE Streptococcus sp._HMT_061 (SP366) -0.200223556066121 -0.251811468020047 0.0763184887141925 0.167821217905833 -2.62352621808255 -1.5004745595479 0.0191785996053565 0.154244965652081 1 1 FALSE FALSE FALSE TRUE Haemophilus sputorum (SP371) 0.0542166405068969 -0.681377560791977 0.118443421106451 0.226290894822108 0.457742945960417 -3.01106927579929 0.651837997818852 0.0066513394767341 1 0.532107158138728 FALSE FALSE TRUE FALSE Rothia mucilaginosa (SP391) 0.221242329533956 0.13836494846587 0.28036340002293 0.360747336244564 0.789127002725253 0.38355085281092 0.434175928361301 0.703117549215287 1 1 FALSE FALSE FALSE TRUE Streptococcus sp._HMT_423 (SP4) 0.608803723186351 -0.219091732578842 0.219597626489155 0.321214914586462 2.77236021590797 -0.682072103846438 0.00754257386409233 0.498004908234474 0.535522744350555 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_215 (SP40) -0.0848658898063274 -0.285003947623932 0.187963459217412 0.253577621702838 -0.45150206406962 -1.12393177958709 0.654770732987373 0.269670325362409 1 1 FALSE FALSE FALSE TRUE Gemella haemolysans (SP41) 0.0136198102077565 -0.406216667970848 0.120894650702558 0.184800829375655 0.112658501667422 -2.19813227756196 0.911077541831265 0.036072914582575 1 1 FALSE FALSE FALSE FALSE Actinomyces graevenitzii (SP42) -0.364787668667508 0.271282238695118 0.0821469326048999 0.1720508907413 -4.44067303671603 1.57675579316253 0.000315758663701392 0.132263992799612 0.0268394864146183 1 TRUE FALSE FALSE TRUE Streptococcus sp._HMT_064 (SP443) 0.242793086831119 -0.183950568543212 0.168082495446968 0.280218324138925 1.44448763796301 -0.656454459602056 0.158634181911945 0.51637545326708 1 1 FALSE FALSE TRUE TRUE Campylobacter concisus (SP45) 0.363666599152783 -0.481388900985923 0.237039936092234 0.312742176787538 1.53419970131648 -1.53925161591798 0.133053882809192 0.131818008857414 1 1 FALSE FALSE FALSE TRUE Granulicatella adiacens (SP46) 0.579336265235882 -0.252045317730503 0.333628701734399 0.461429738113922 1.73647010051638 -0.546226861668538 0.0882906875572926 0.587202137805188 1 1 FALSE FALSE TRUE TRUE Schaalia lingnae (SP49) 0.0131576834451991 -0.43485709140401 0.130138128894849 0.195798892134576 0.101105521932241 -2.22093744588261 0.920139408736622 0.0340506346440482 1 1 FALSE FALSE FALSE FALSE Stomatobaculum sp._HMT_097 (SP5) 0.592634615072084 -1.18512192215895 0.135732418662959 0.216246599490493 4.36619800125769 -5.48041876705236 0.000298892541341017 2.30164441479787e-05 0.0257047585553275 0.00200243064087415 TRUE TRUE TRUE TRUE Neisseria flava (SP53) 0.165518421744765 0.119625164430881 0.209357906544888 0.339120369069815 0.790600290556862 0.352751339469833 0.43332423955316 0.725921835512203 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum (SP56) 0.318070661560216 -0.883979824003427 0.248899447631685 0.309323240375809 1.27790826611592 -2.85778664069808 0.211775091175534 0.0079608230348247 1 0.620944196716326 FALSE FALSE FALSE TRUE Schaalia sp._HMT_172 (SP57) -0.0481136323025212 -0.177869614556611 0.107619266345561 0.191155825183936 -0.447072665855483 -0.930495392360965 0.657657716503047 0.358674768534258 1 1 FALSE FALSE TRUE TRUE Catonella morbi (SP58) 0.341794157402332 -0.856118230516543 0.11820006824738 0.20598979789167 2.89165786847936 -4.15611957135264 0.00971887920871586 0.000593346555555732 0.68032154461011 0.0492477641111258 FALSE TRUE FALSE FALSE Neisseria sicca (SP614) -0.0419896780436883 -0.472818314639705 0.172404901210956 0.250774175643402 -0.243552693390714 -1.88543462829302 0.810876752914435 0.0788914491761619 1 1 FALSE FALSE TRUE TRUE Klebsiella pneumoniae (SP63) 0.358319998201609 0.27181220439588 0.662902448140882 0.875243654900927 0.540532018257772 0.310556041022254 0.591094644882874 0.757356187824091 1 1 FALSE FALSE TRUE TRUE Neisseria flavescens (SP68) 0.847399070978066 -0.772783922531735 0.258948776215679 0.439286800637763 3.27245829604641 -1.75917856263789 0.00187953330544194 0.0843189397199232 0.139085464602703 1 FALSE FALSE TRUE FALSE Raoultella planticola (SP69) 0.973079693402659 -0.400876403028987 0.213326128626669 0.27171272503262 4.5614651129098 -1.47536852748012 0.00136341122530657 0.174218148050469 0.107709486799219 1 FALSE FALSE FALSE TRUE Streptococcus downii (SP70) -0.0706343858423126 -0.364149487570673 0.201251425938621 0.266970014770887 -0.350975827937016 -1.36400894266416 0.728945206098835 0.186358270389286 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP75) -0.00191500522217503 -0.44058522560428 0.127487323696189 0.195665523294588 -0.0150211422332358 -2.25172640629668 0.988144855008886 0.034190832816132 1 1 FALSE FALSE FALSE FALSE Gemella morbillorum (SP8) 0.54340279583208 -0.377132146094227 0.153546416810426 0.268067363662454 3.5390131995264 -1.40685587734994 0.000903443321961055 0.165912203905597 0.0722754657568844 1 FALSE FALSE TRUE TRUE Streptococcus oralis (SP80) 0.857473675777648 -0.757227269482617 0.261116141307718 0.339903819010579 3.28387847447216 -2.22776923097486 0.00180038206026383 0.030083180183315 0.135028654519787 1 FALSE FALSE TRUE TRUE Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 0.730628849017926 -0.501837882075897 0.408026055650019 0.543173831596718 1.7906426290693 -0.923899225043096 0.0789567186426089 0.359648947015054 1 1 FALSE FALSE FALSE TRUE Aggregatibacter aphrophilus (SP84) -0.0344978896911164 -0.545017108951209 0.227117670118145 0.334077026328111 -0.151894344782469 -1.63141151889901 0.880399584054588 0.114414613725096 1 1 FALSE FALSE TRUE TRUE Streptococcus parasanguinis_clade_411 (SP88) 0.667752697268606 -0.615114812578654 0.188092923819706 0.292379497912914 3.55012131082971 -2.10382334250354 0.000873829314972499 0.0406583039789523 0.0707801745127724 1 FALSE FALSE FALSE FALSE Streptococcus salivarius (SP89) 0.326717649671826 0.129965786869294 0.172830699767456 0.271545267626592 1.89039129108095 0.47861554725385 0.0643941379717792 0.634257733829968 1 1 FALSE FALSE TRUE TRUE Solobacterium moorei (SP9) 0.0797511386212525 -0.0203958604767288 0.220409249193849 0.269739394482252 0.361832086960705 -0.0756132062796292 0.71943067042254 0.940113377721673 1 1 FALSE FALSE FALSE TRUE Veillonella rogosae (SP90) -0.182573502688325 -0.0509925658977058 0.174134666693609 0.275440578635164 -1.04846155079255 -0.185130913354812 0.302531860569287 0.854332290163788 1 1 FALSE FALSE TRUE TRUE Neisseria perflava (SP94) -0.173179801411681 -0.122047051835812 0.130669957955231 0.196459760967509 -1.32532224025827 -0.621231804593287 0.195411526274481 0.539299973973338 1 1 FALSE FALSE TRUE TRUE Actinomyces sp._HMT_169 (SP95) -0.056313506488392 0.312368322696955 0.160023338835808 0.263261474182777 -0.35190808352132 1.18653260476725 0.726754437839764 0.24241176109517 1 1 FALSE FALSE TRUE TRUE Granulicatella elegans (SP99) -0.527090549974988 0.372039440077595 0.0925886776072368 0.197378800598536 -5.69281864258736 1.88490070336538 2.1269330023103e-05 0.0756938056202791 0.00191423970207927 1 TRUE FALSE FALSE TRUE Enterobacter mori_nov_97.951% (SPN106) -0.421730020281028 2.20953002122287 0.103641218662926 0.189059084305679 -4.06913413139829 11.6869815028322 0.00155601859529893 6.48838023375668e-08 0.121358821720043 5.83954221038101e-06 FALSE TRUE FALSE FALSE Campylobacter concisus_nov_96.963% (SPN15) -0.218573327404256 -0.115195343297512 0.152830077300111 0.239390510306261 -1.43017219689711 -0.481202630589403 0.164138835219468 0.634249412889931 1 1 FALSE FALSE TRUE TRUE Haemophilus haemolyticus_nov_97.947% (SPN447) -0.00383131113324695 -0.856817249093125 0.101244457761929 0.178947898640676 -0.0378421813691381 -4.78808220494167 0.970388461353116 0.000354335603675808 1 0.0301185263124437 FALSE TRUE FALSE FALSE Streptococcus sanguinis_nov_97.782% (SPN62) -0.244723210966138 -0.0234404358639262 0.105534664401674 0.175819645185111 -2.31888936543826 -0.133320914390693 0.0276497454301857 0.894860448634121 1 1 FALSE FALSE FALSE TRUE Staphylococcus argenteus_aureus_roterodami (SPP18) 0.132337266939488 0.698896218856891 0.306950636536004 0.449749903800063 0.431135339652459 1.55396635541603 0.669173330004039 0.129731641115472 1 1 FALSE FALSE TRUE TRUE Veillonella dispar_parvula (SPP25) 0.00456537933682389 0.276312929960977 0.33298843721138 0.436507187408157 0.0137103239231271 0.633008889502225 0.989130984993958 0.530422360995653 1 1 FALSE FALSE TRUE TRUE Streptococcus infantis_infantis_clade_638 (SPP29) 0.0249051780491086 -0.192233695925355 0.132623851649956 0.212380015411453 0.187788076875061 -0.905140229663003 0.852159043545787 0.371760698462531 1 1 FALSE FALSE TRUE TRUE Streptococcus parasanguinis_parasanguinis_clade_721 (SPP53) 0.178662394061428 0.121060469845913 0.371458739087243 0.469832264398376 0.480975072764316 0.257667425205315 0.632917414063946 0.797864899236227 1 1 FALSE FALSE TRUE TRUE Veillonella denticariosi_dispar_parvula (SPP6) -0.319828244777567 0.0250482403359761 0.0814126658364506 0.161428256162462 -3.92848264445815 0.15516639361307 0.000508864593112098 0.877803316271208 0.0427446258214162 1 TRUE FALSE FALSE TRUE Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 0.0384802867054636 -0.325337717065862 0.108313063937381 0.211284156765701 0.355269118115892 -1.53981122884968 0.727028086037116 0.143148541295509 1 1 FALSE FALSE FALSE TRUE