QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus multispecies_spp53_2 (SPP53) 352
Leptotrichia sp. HMT215 (SP40) 351
Streptococcus parasanguinis_clade_411 (SP88) 343
Gemella haemolysans (SP41) 342
Schaalia odontolytica (SP19) 340
Streptococcus australis (SP17) 339
Streptococcus sanguinis (SP179) 338
Streptococcus mitis (SP249) 337
Gemella morbillorum (SP8) 337
Solobacterium moorei (SP9) 332
Rothia mucilaginosa (SP391) 331
Streptococcus sp. HMT066 (SP246) 328
Streptococcus infantis_clade_431 (SP148) 327
Gemella sanguinis (SP285) 322
Streptococcus multispecies_spp29_2 (SPP29) 321
Rothia dentocariosa (SP201) 319
Rothia aeria (SP621) 319
Neisseria flava (SP53) 318
Streptococcus sp. HMT423 (SP4) 317
Stomatobaculum sp. HMT097 (SP5) 317
Granulicatella elegans (SP99) 313
Schaalia sp. HMT172 (SP57) 313
Catonella morbi (SP58) 310
Streptococcus gordonii (SP144) 310
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 307
Lancefieldella parvula (SP174) 304
Schaalia lingnae (SP49) 304
Fusobacterium periodonticum (SP130) 303
Schaalia sp. HMT180 (SP109) 302
Streptococcus cristatus_clade_578 (SP24) 300
Actinomyces sp. HMT175 (SP205) 298
Fusobacterium sp. HMT204 (SP343) 293
Streptococcus salivarius (SP89) 292
Peptostreptococcaceae_[G-7] bacterium HMT922 (SP279) 290
Lachnoanaerobaculum gingivalis (SP20) 290
Alloprevotella sp. HMT308 (SP52) 289
Streptococcus sp. HMT064 (SP443) 287
Streptococcus sp. HMT061 (SP366) 287
Streptococcus oralis (SP80) 279
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 274
Granulicatella adiacens (SP46) 274
Actinomyces graevenitzii (SP42) 272
Fusobacterium hwasookii (SP127) 272
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 272
Actinomyces sp. HMT169 (SP95) 270
Streptococcus chosunense (SP182) 268
Streptococcus sp. HMT074 (SP12) 266
Mobiluncus curtisii_nov_96.694% (SPN405) 265
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline +PMA Baseline +PMA Baseline +PMA Baseline +PMA Baseline +PMA Baseline -PMA Baseline -PMA Baseline -PMA Baseline -PMA Baseline -PMA
Streptococcus multispecies_spp53_2 (SPP53) 1.0 1.00 1.0 1.50 11.0 98.0 186.75 512.5 1206.50 1969.0
Leptotrichia sp. HMT215 (SP40) 1.0 1.00 1.0 1.00 4.0 97.0 160.25 219.5 302.50 492.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 1.0 1.00 1.0 38.0 56.50 135.0 265.00 475.0
Gemella haemolysans (SP41) 1.0 1.00 1.0 1.00 12.0 44.0 111.75 215.0 346.25 1005.0
Schaalia odontolytica (SP19) 1.0 1.00 1.0 6.00 14.0 94.0 183.25 253.0 307.75 506.0
Streptococcus australis (SP17) 1.0 1.00 1.0 1.00 1.0 13.0 42.50 92.5 162.50 309.0
Streptococcus sanguinis (SP179) 1.0 1.00 1.0 7.00 12.0 85.0 119.25 249.5 374.50 534.0
Streptococcus mitis (SP249) 1.0 1.00 1.0 1.00 1.0 1.0 75.00 123.5 163.25 378.0
Gemella morbillorum (SP8) 1.0 1.00 1.0 1.50 12.0 32.0 105.25 193.5 256.75 362.0
Solobacterium moorei (SP9) 1.0 1.00 1.0 1.00 14.0 9.0 44.75 106.5 164.50 355.0
Rothia mucilaginosa (SP391) 1.0 3.25 9.5 19.50 102.0 179.0 330.75 559.0 712.50 1920.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 1.0 1.00 1.0 8.0 30.50 53.0 104.50 179.0
Streptococcus infantis_clade_431 (SP148) 1.0 1.00 1.0 1.00 19.0 20.0 44.00 54.0 95.50 202.0
Gemella sanguinis (SP285) 1.0 7.75 13.5 17.25 59.0 152.0 315.00 428.0 599.75 721.0
Streptococcus multispecies_spp29_2 (SPP29) 1.0 1.00 1.0 1.00 10.0 1.0 30.25 57.5 98.50 342.0
Rothia dentocariosa (SP201) 1.0 1.00 5.0 9.25 19.0 42.0 105.00 128.5 149.75 191.0
Rothia aeria (SP621) 1.0 1.00 1.0 1.00 4.0 7.0 9.00 25.0 50.75 172.0
Neisseria flava (SP53) 4836.0 7659.25 9731.0 13893.25 25086.0 1555.0 2171.50 3218.5 4217.75 4432.0
Streptococcus sp. HMT423 (SP4) 1.0 1.00 31.0 91.00 251.0 443.0 614.00 1140.5 2153.25 4401.0
Stomatobaculum sp. HMT097 (SP5) 1.0 1.00 1.0 1.00 1.0 1.0 10.50 59.0 83.50 158.0
Granulicatella elegans (SP99) 1.0 1.00 1.0 1.00 11.0 6.0 17.00 22.5 31.25 62.0
Schaalia sp. HMT172 (SP57) 1.0 1.00 1.0 1.00 6.0 1.0 17.75 22.5 38.75 61.0
Catonella morbi (SP58) 1.0 1.00 1.0 1.00 1.0 1.0 6.50 31.5 93.50 134.0
Streptococcus gordonii (SP144) 1.0 1.00 1.0 11.75 31.0 43.0 76.00 164.5 424.25 711.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 1.0 1.00 1.0 3.25 28.0 1.0 24.75 45.5 68.00 133.0
Lancefieldella parvula (SP174) 1.0 1.00 1.0 1.00 4.0 1.0 7.75 13.0 32.50 83.0
Schaalia lingnae (SP49) 1.0 1.00 1.0 1.00 5.0 1.0 22.00 39.5 77.50 122.0
Fusobacterium periodonticum (SP130) 14.0 77.75 140.5 351.50 819.0 501.0 1182.75 2169.5 4328.00 6726.0
Schaalia sp. HMT180 (SP109) 1.0 1.00 1.0 1.00 10.0 1.0 17.50 27.0 44.25 61.0
Streptococcus cristatus_clade_578 (SP24) 1.0 1.00 1.0 1.00 14.0 1.0 14.75 33.0 103.00 361.0
Actinomyces sp. HMT175 (SP205) 1.0 1.00 1.0 1.00 1.0 1.0 11.75 19.0 27.25 40.0
Fusobacterium sp. HMT204 (SP343) 1.0 1.00 1.0 3.25 18.0 8.0 15.00 24.0 37.25 74.0
Streptococcus salivarius (SP89) 1.0 1.00 23.5 172.25 305.0 144.0 238.25 762.5 2193.50 4903.0
Peptostreptococcaceae_[G-7] bacterium HMT922 (SP279) 1.0 1.00 1.0 1.00 5.0 1.0 4.00 13.5 30.25 39.0
Lachnoanaerobaculum gingivalis (SP20) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 26.0 34.50 46.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 1.0 2.00 19.0 1.0 7.75 30.5 72.50 135.0
Streptococcus sp. HMT064 (SP443) 1.0 1.00 1.0 1.00 9.0 1.0 10.75 42.5 73.50 136.0
Streptococcus sp. HMT061 (SP366) 1.0 1.00 1.0 1.00 7.0 1.0 10.75 13.0 19.75 76.0
Streptococcus oralis (SP80) 1.0 1.00 35.0 80.25 179.0 47.0 141.75 186.0 327.25 782.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 1.0 8.25 32.0 1.0 16.00 30.5 61.75 109.0
Granulicatella adiacens (SP46) 1.0 9.25 23.5 72.75 134.0 100.0 120.75 353.0 784.50 1004.0
Actinomyces graevenitzii (SP42) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 10.5 25.25 53.0
Fusobacterium hwasookii (SP127) 1.0 1.00 1.0 1.00 38.0 1.0 26.25 39.5 56.50 102.0
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 1.0 1.00 1.0 1.00 4.0 1.0 1.00 9.5 25.50 54.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 1.00 1.0 1.0 4.00 7.0 15.25 24.0
Streptococcus chosunense (SP182) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 27.0 38.50 83.0
Streptococcus sp. HMT074 (SP12) 1.0 1.00 1.0 1.00 6.0 1.0 1.00 9.0 25.00 173.0
Mobiluncus curtisii_nov_96.694% (SPN405) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 5.5 21.25 57.0
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