QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 455
Neisseria flava (SP53) 443
Neisseria mucosa (SP346) 440
Neisseria elongata (SP145) 439
Prevotella melaninogenica (SP120) 439
Veillonella rogosae (SP90) 429
Aggregatibacter segnis (SP111) 425
Campylobacter concisus_nov_96.963% (SPN15) 421
Veillonella tobetsuensis (SP107) 421
Neisseria perflava (SP94) 421
Neisseria flavescens (SP68) 419
Fusobacterium periodonticum (SP130) 418
Veillonella dispar (SP3) 417
Neisseria subflava (SP200) 416
Rothia mucilaginosa (SP391) 416
Veillonella parvula (SP2) 415
Veillonella multispecies_spp6_3 (SPP6) 414
Haemophilus sp. HMT036 (SP188) 414
Aggregatibacter sp. HMT458 (SP136) 413
Haemophilus sputorum (SP371) 411
Aggregatibacter aphrophilus (SP84) 411
Alloprevotella sp. HMT473 (SP181) 408
Veillonella atypica (SP35) 407
Campylobacter showae (SP265) 405
Aggregatibacter sp. HMT513 (SP252) 405
Haemophilus haemolyticus (SP163) 404
Neisseria sp. HMT020 nov_94.070% (SPN248) 399
Lautropia mirabilis (SP106) 399
Streptococcus oralis (SP80) 398
Veillonella multispecies_spp25_2 (SPP25) 395
Haemophilus parainfluenzae (SP14) 392
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 389
Gemella sanguinis (SP285) 387
Prevotella nanceiensis (SP25) 386
Porphyromonas catoniae (SP15) 384
Campylobacter concisus (SP45) 383
Kingella oralis (SP299) 382
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 381
Neisseria sicca (SP614) 379
Haemophilus pittmaniae (SP169) 379
Cutibacterium acnes (SP222) 375
Eikenella corrodens (SP104) 375
Alloprevotella sp. HMT308 (SP52) 369
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 368
Gemella haemolysans (SP41) 365
Schaalia odontolytica (SP19) 363
Fusobacterium sp. HMT204 (SP343) 363
Prevotella salivae (SP47) 363
Veillonella sp. HMT780 (SP60) 361
Rothia dentocariosa (SP201) 360
Haemophilus haemolyticus_nov_97.947% (SPN447) 357
Capnocytophaga sputigena (SP59) 356
Prevotella shahii (SP165) 355
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 354
Alloprevotella tannerae (SP315) 353
Prevotella jejuni (SP143) 353
Prevotella histicola (SP79) 353
Capnocytophaga endodontalis (SP67) 353
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP207) 352
Streptococcus infantis_clade_431 (SP148) 351
Gemella morbillorum (SP8) 351
Neisseria oralis (SP198) 350
Streptococcus sp. HMT061 (SP366) 350
Streptococcus salivarius (SP89) 348
Capnocytophaga gingivalis (SP110) 348
Campylobacter sp. HMT044 (SP348) 342
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 342
Schaalia sp. HMT172 (SP57) 340
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final D +PMA Final D +PMA Final D +PMA Final D +PMA Final D +PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.0 1.0 1.75 1431.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 1.0 34.5 713.25 2228.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.0 1.0 1.00 1323.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.0 1.0 17.25 700.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.0 1.0 1.00 493.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.0 1.0 452.00 3230.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.0 1.0 30.00 3761.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.0 1.0 1.00 750.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.0 1.0 3.00 499.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.0 25.0 405.25 12377.0
Neisseria flavescens (SP68) 586.0 2918.50 3827.0 6820.00 20640.0 1.0 1.0 37.5 1384.25 10255.0
Fusobacterium periodonticum (SP130) 14.0 151.25 661.0 2033.25 6726.0 1.0 1.0 1.0 102.25 5065.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.0 1.0 40.25 2749.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 1.0 5.0 306.75 4569.0
Rothia mucilaginosa (SP391) 1.0 9.75 140.5 549.50 1920.0 1.0 1.0 1.0 1.00 109.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.0 1.0 911.75 5455.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.0 1.0 141.50 3147.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.0 1.0 1.00 1436.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.0 1.0 1.00 77.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.0 1.0 1.00 1589.0
Aggregatibacter aphrophilus (SP84) 1.0 66.50 139.0 325.50 1695.0 1.0 1.0 1.0 1.00 715.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.0 1.0 1.00 427.0
Veillonella atypica (SP35) 39.0 523.00 974.0 2635.50 5770.0 1.0 1.0 22.5 285.25 7332.0
Campylobacter showae (SP265) 1.0 16.75 67.0 210.00 345.0 1.0 1.0 1.0 1.00 365.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.0 1.0 9.50 581.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.0 1.0 1.00 165.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.0 1.0 1.00 4.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.0 1.0 1.00 1.0
Streptococcus oralis (SP80) 1.0 40.25 113.0 185.00 782.0 1.0 1.0 1.0 1.00 254.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 1.0 201.0 3442.00 30343.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 1.0 2136.5 12033.00 45533.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 1.0 4.00 36.5 79.25 234.0 1.0 1.0 1.0 1.00 305.0
Gemella sanguinis (SP285) 1.0 13.75 105.5 421.50 721.0 1.0 1.0 1.0 1.00 999.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.0 1.0 1.00 1.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.0 1.0 1.00 1.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 1.0 20.0 629.00 8926.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.0 1.0 1.00 6.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 1.0 1.00 16.5 66.00 497.0 1.0 1.0 1.0 1.00 1.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.0 1.0 1.00 332.0
Haemophilus pittmaniae (SP169) 1.0 25.25 61.5 135.00 370.0 1.0 1.0 1.0 1.00 300.0
Cutibacterium acnes (SP222) 1.0 1.00 1.0 1.00 13.0 1.0 1.0 1.0 19.50 16012.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.0 5.0 124.00 2042.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 6.5 26.25 135.0 1.0 1.0 1.0 1.00 1.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 1.0 1.0 1.0 1.00 14.0
Gemella haemolysans (SP41) 1.0 1.00 28.0 203.50 1005.0 1.0 1.0 1.0 1.00 49.0
Schaalia odontolytica (SP19) 1.0 1.00 54.0 252.50 506.0 1.0 1.0 1.0 1.00 280.0
Fusobacterium sp. HMT204 (SP343) 1.0 1.00 11.0 24.00 74.0 1.0 1.0 1.0 1.00 1.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.0 1.0 1.00 1.0
Veillonella sp. HMT780 (SP60) 1.0 1.00 8.5 13.00 101.0 1.0 1.0 1.0 1.00 1.0
Rothia dentocariosa (SP201) 1.0 5.00 30.5 127.25 191.0 1.0 1.0 1.0 1.00 533.0
Haemophilus haemolyticus_nov_97.947% (SPN447) 1.0 1.00 10.0 36.75 175.0 1.0 1.0 1.0 1.00 2131.0
Capnocytophaga sputigena (SP59) 1.0 1.00 4.5 17.50 42.0 1.0 1.0 1.0 1.00 1.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.0 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.0 1.0 1.00 1.0
Alloprevotella tannerae (SP315) 1.0 1.00 1.0 15.00 38.0 1.0 1.0 1.0 1.00 1.0
Prevotella jejuni (SP143) 1.0 1.00 3.5 16.75 63.0 1.0 1.0 1.0 1.00 1.0
Prevotella histicola (SP79) 1.0 1.00 2.0 18.25 50.0 1.0 1.0 1.0 1.00 1.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.0 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP207) 1.0 1.00 5.0 10.00 26.0 1.0 1.0 1.0 1.00 1.0
Streptococcus infantis_clade_431 (SP148) 1.0 1.00 19.5 53.00 202.0 1.0 1.0 1.0 1.00 110.0
Gemella morbillorum (SP8) 1.0 1.00 22.0 190.75 362.0 1.0 1.0 1.0 1.00 227.0
Neisseria oralis (SP198) 1.0 6.00 13.5 18.50 37.0 1.0 1.0 1.0 1.00 618.0
Streptococcus sp. HMT061 (SP366) 1.0 1.00 5.5 12.50 76.0 1.0 1.0 1.0 1.00 1.0
Streptococcus salivarius (SP89) 1.0 31.25 183.5 755.25 4903.0 1.0 1.0 1.0 10.00 2146.0
Capnocytophaga gingivalis (SP110) 1.0 1.00 1.0 30.25 72.0 1.0 1.0 1.0 1.00 1.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.0 1.0 1.00 1.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 1.0 1.00 12.5 45.25 133.0 1.0 1.0 1.0 1.00 148.0
Schaalia sp. HMT172 (SP57) 1.0 1.00 3.5 21.75 61.0 1.0 1.0 1.0 1.00 1.0
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