QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Klebsiella pneumoniae (SP63) 430
Porphyromonas pasteri (SP34) 429
Neisseria mucosa (SP346) 415
Veillonella rogosae (SP90) 414
Prevotella melaninogenica (SP120) 413
Cutibacterium acnes (SP222) 413
Neisseria perflava (SP94) 413
Neisseria elongata (SP145) 413
Veillonella dispar (SP3) 411
Enterobacter mori (SP330) 411
Campylobacter concisus (SP45) 411
Veillonella multispecies_spp25_2 (SPP25) 411
Campylobacter concisus_nov_96.963% (SPN15) 409
Veillonella tobetsuensis (SP107) 409
Neisseria flava (SP53) 408
Aggregatibacter segnis (SP111) 404
Veillonella parvula (SP2) 404
Veillonella atypica (SP35) 403
Haemophilus sputorum (SP371) 402
Fusobacterium periodonticum (SP130) 397
Aggregatibacter aphrophilus (SP84) 397
Aggregatibacter sp. HMT513 (SP252) 395
Alloprevotella sp. HMT473 (SP181) 394
Haemophilus haemolyticus (SP163) 393
Haemophilus sp. HMT036 (SP188) 393
Neisseria subflava (SP200) 392
Eikenella corrodens (SP104) 391
Aggregatibacter sp. HMT458 (SP136) 390
Veillonella multispecies_spp6_3 (SPP6) 389
Klebsiella aerogenes (SP327) 388
Enterobacter mori_nov_97.951% (SPN106) 386
Campylobacter showae (SP265) 385
Gemella sanguinis (SP285) 385
Streptococcus oralis (SP80) 381
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 379
Neisseria sp. HMT020 nov_94.070% (SPN248) 378
Lautropia mirabilis (SP106) 372
Neisseria flavescens (SP68) 370
Haemophilus parainfluenzae (SP14) 367
Porphyromonas catoniae (SP15) 362
Prevotella nanceiensis (SP25) 360
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 360
Haemophilus pittmaniae (SP169) 358
Neisseria oralis (SP198) 355
Gemella haemolysans (SP41) 353
Fusobacterium nucleatum (SP56) 352
Haemophilus haemolyticus_nov_97.947% (SPN447) 351
Neisseria sicca (SP614) 348
Solobacterium moorei (SP9) 348
Streptococcus infantis_clade_431 (SP148) 346
Kingella oralis (SP299) 342
Alloprevotella sp. HMT308 (SP52) 339
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 337
Prevotella salivae (SP47) 334
Fusobacterium sp. HMT204 (SP343) 333
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 333
Veillonella sp. HMT780 (SP60) 332
Schaalia odontolytica (SP19) 331
Gemella morbillorum (SP8) 327
Capnocytophaga sputigena (SP59) 327
Prevotella shahii (SP165) 327
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 323
Capnocytophaga endodontalis (SP67) 323
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final G +PMA Final G +PMA Final G +PMA Final G +PMA Final G +PMA
Klebsiella pneumoniae (SP63) 1.0 7.00 35.5 239.75 1996.0 7.0 2930.75 9271.0 21501.25 61869.0
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 1.0 1.00 1371.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 1.00 882.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.00 1.0 71.50 1639.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 1.0 1.00 35.0
Cutibacterium acnes (SP222) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 3.5 13.50 654.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.00 1.0 177.00 4245.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 1.0 1.00 476.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 1.0 1.00 1438.0
Enterobacter mori (SP330) 1.0 1.00 1.0 1.00 1168.0 1.0 1.00 1.0 1390.00 6713.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 1.00 1.0 12.50 456.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 1.00 41.5 130.25 1992.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 1.0 1.00 25.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 1.0 1.00 13.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 1.00 70.0 178.50 8307.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 1.0 9.25 227.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.00 5.5 66.25 6150.0
Veillonella atypica (SP35) 39.0 523.00 974.0 2635.50 5770.0 1.0 1.00 1.0 41.50 1055.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 1.0 1.00 1.0
Fusobacterium periodonticum (SP130) 14.0 151.25 661.0 2033.25 6726.0 1.0 1.00 1.0 41.75 1080.0
Aggregatibacter aphrophilus (SP84) 1.0 66.50 139.0 325.50 1695.0 1.0 1.00 1.0 1.00 115.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 1.00 426.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 1.00 1.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 1.00 1.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 1.00 379.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 1.00 12.0 75.25 7393.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.00 1.0 12.00 2039.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 1.00 369.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.00 1.0 46.25 3135.0
Klebsiella aerogenes (SP327) 1.0 1.00 1.0 1.00 1268.0 1.0 1.00 1.0 289.00 27757.0
Enterobacter mori_nov_97.951% (SPN106) 1.0 1.00 1.0 1.00 1172.0 1.0 1.00 1.0 1683.00 5987.0
Campylobacter showae (SP265) 1.0 16.75 67.0 210.00 345.0 1.0 1.00 1.0 1.00 15.0
Gemella sanguinis (SP285) 1.0 13.75 105.5 421.50 721.0 1.0 1.00 1.0 1.00 575.0
Streptococcus oralis (SP80) 1.0 40.25 113.0 185.00 782.0 1.0 1.00 1.0 1.00 258.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 1.0 4.00 36.5 79.25 234.0 1.0 1.00 1.0 1.00 1.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.00 1.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.00 1.0 1.00 11.0
Neisseria flavescens (SP68) 586.0 2918.50 3827.0 6820.00 20640.0 1.0 30.50 148.0 688.00 24362.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 21.00 410.5 4622.75 55575.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 1.00 1.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 1.00 1.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 1.0 1.00 16.5 66.00 497.0 1.0 1.00 1.0 1.00 1.0
Haemophilus pittmaniae (SP169) 1.0 25.25 61.5 135.00 370.0 1.0 1.00 1.0 1.00 52.0
Neisseria oralis (SP198) 1.0 6.00 13.5 18.50 37.0 1.0 1.00 1.0 1.00 1.0
Gemella haemolysans (SP41) 1.0 1.00 28.0 203.50 1005.0 1.0 1.00 1.0 1.00 5.0
Fusobacterium nucleatum (SP56) 1.0 13.50 40.0 108.25 601.0 1.0 1.00 1.0 1.00 204.0
Haemophilus haemolyticus_nov_97.947% (SPN447) 1.0 1.00 10.0 36.75 175.0 1.0 1.00 1.0 1.00 1.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.00 1.0 1.00 130.0
Solobacterium moorei (SP9) 1.0 1.00 10.0 102.75 355.0 1.0 1.00 1.0 1.00 11.0
Streptococcus infantis_clade_431 (SP148) 1.0 1.00 19.5 53.00 202.0 1.0 1.00 1.0 1.00 1.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 1.0 1.00 294.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 6.5 26.25 135.0 1.0 1.00 1.0 1.00 1.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 1.0 1.00 1.0 1.00 142.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.00 1.0 1.00 1.0
Fusobacterium sp. HMT204 (SP343) 1.0 1.00 11.0 24.00 74.0 1.0 1.00 1.0 1.00 20.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 1.0 1.00 12.5 45.25 133.0 1.0 1.00 1.0 1.00 15.0
Veillonella sp. HMT780 (SP60) 1.0 1.00 8.5 13.00 101.0 1.0 1.00 1.0 1.00 1.0
Schaalia odontolytica (SP19) 1.0 1.00 54.0 252.50 506.0 1.0 1.00 1.0 2.00 22.0
Gemella morbillorum (SP8) 1.0 1.00 22.0 190.75 362.0 1.0 1.00 1.0 1.00 338.0
Capnocytophaga sputigena (SP59) 1.0 1.00 4.5 17.50 42.0 1.0 1.00 1.0 1.00 1.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.00 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.00 1.0 1.00 1.0
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