QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Schaalia odontolytica (SP19) 391
Rothia mucilaginosa (SP391) 382
Granulicatella adiacens (SP46) 377
Streptococcus australis (SP17) 376
Leptotrichia sp. HMT215 (SP40) 370
Veillonella rogosae (SP90) 370
Veillonella tobetsuensis (SP107) 369
Neisseria perflava (SP94) 365
Veillonella atypica (SP35) 365
Veillonella dispar (SP3) 365
Schaalia sp. HMT172 (SP57) 363
Rothia dentocariosa (SP201) 360
Schaalia lingnae (SP49) 357
Veillonella parvula (SP2) 357
Neisseria flava (SP53) 357
Schaalia sp. HMT180 (SP109) 356
Veillonella multispecies_spp6_3 (SPP6) 356
Neisseria elongata (SP145) 356
Streptococcus multispecies_spp53_2 (SPP53) 351
Aggregatibacter aphrophilus (SP84) 349
Gemella morbillorum (SP8) 347
Porphyromonas pasteri (SP34) 346
Neisseria mucosa (SP346) 346
Neisseria flavescens (SP68) 343
Streptococcus gordonii (SP144) 343
Gemella sanguinis (SP285) 342
Streptococcus cristatus_clade_578 (SP24) 336
Gemella haemolysans (SP41) 335
Veillonella multispecies_spp25_2 (SPP25) 335
Actinomyces sp. HMT175 (SP205) 334
Actinomyces sp. HMT169 (SP95) 334
Streptococcus sanguinis (SP179) 331
Streptococcus oralis (SP80) 330
Streptococcus sp. HMT066 (SP246) 330
Campylobacter concisus_nov_96.963% (SPN15) 328
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 328
Solobacterium moorei (SP9) 328
Veillonella sp. HMT780 (SP60) 326
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 326
Campylobacter showae (SP265) 326
Lancefieldella parvula (SP174) 325
Streptococcus sanguinis_nov_97.782% (SPN62) 324
Haemophilus sputorum (SP371) 323
Neisseria subflava (SP200) 321
Lautropia mirabilis (SP106) 321
Lachnoanaerobaculum gingivalis (SP20) 318
Catonella morbi (SP58) 317
Abiotrophia defectiva (SP119) 316
Prevotella melaninogenica (SP120) 312
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 312
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 306
Neisseria sp. HMT020 nov_94.070% (SPN248) 306
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 305
Fusobacterium periodonticum (SP130) 302
Streptococcus multispecies_spp29_2 (SPP29) 301
Actinomyces graevenitzii (SP42) 301
Streptococcus parasanguinis_clade_411 (SP88) 299
Eikenella corrodens (SP104) 296
Mobiluncus curtisii_nov_96.694% (SPN405) 292
Streptococcus salivarius (SP89) 290
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Final D +PMA Final D +PMA Final D +PMA Final D +PMA Final D +PMA Final D -PMA Final D -PMA Final D -PMA Final D -PMA Final D -PMA
Schaalia odontolytica (SP19) 1.0 1.0 1.0 1.00 280.0 7.0 206.75 316.0 392.50 638.0
Rothia mucilaginosa (SP391) 1.0 1.0 1.0 1.00 109.0 14.0 90.75 150.5 208.25 890.0
Granulicatella adiacens (SP46) 1.0 1.0 1.0 133.25 2221.0 12.0 254.00 921.5 1676.75 2220.0
Streptococcus australis (SP17) 1.0 1.0 1.0 1.00 312.0 1.0 67.75 194.5 269.50 464.0
Leptotrichia sp. HMT215 (SP40) 1.0 1.0 1.0 1.00 231.0 1.0 62.50 110.5 234.00 433.0
Veillonella rogosae (SP90) 1.0 1.0 1.0 452.00 3230.0 100.0 992.00 1435.0 2984.50 6059.0
Veillonella tobetsuensis (SP107) 1.0 1.0 1.0 3.00 499.0 15.0 129.00 170.5 329.00 427.0
Neisseria perflava (SP94) 1.0 1.0 25.0 405.25 12377.0 124.0 1314.25 1746.0 2390.75 5545.0
Veillonella atypica (SP35) 1.0 1.0 22.5 285.25 7332.0 53.0 1147.25 1785.5 2631.50 3888.0
Veillonella dispar (SP3) 1.0 1.0 1.0 40.25 2749.0 23.0 205.50 262.0 406.75 1087.0
Schaalia sp. HMT172 (SP57) 1.0 1.0 1.0 1.00 1.0 1.0 20.50 35.0 52.50 85.0
Rothia dentocariosa (SP201) 1.0 1.0 1.0 1.00 533.0 1.0 27.75 123.0 163.25 325.0
Schaalia lingnae (SP49) 1.0 1.0 1.0 1.00 36.0 1.0 22.00 37.0 52.50 133.0
Veillonella parvula (SP2) 1.0 1.0 1.0 911.75 5455.0 20.0 1002.50 1394.5 1720.25 2019.0
Neisseria flava (SP53) 1.0 1.0 34.5 713.25 2228.0 399.0 928.25 1342.0 1748.00 14713.0
Schaalia sp. HMT180 (SP109) 1.0 1.0 1.0 1.00 795.0 1.0 32.25 56.5 74.00 122.0
Veillonella multispecies_spp6_3 (SPP6) 1.0 1.0 1.0 141.50 3147.0 36.0 255.50 347.0 521.00 881.0
Neisseria elongata (SP145) 1.0 1.0 1.0 17.25 700.0 13.0 97.50 150.0 221.25 693.0
Streptococcus multispecies_spp53_2 (SPP53) 1.0 1.0 1.0 15.50 2982.0 1.0 92.50 786.0 2391.75 4808.0
Aggregatibacter aphrophilus (SP84) 1.0 1.0 1.0 1.00 715.0 1.0 42.75 97.5 229.00 1175.0
Gemella morbillorum (SP8) 1.0 1.0 1.0 1.00 227.0 1.0 24.50 50.0 78.00 192.0
Porphyromonas pasteri (SP34) 1.0 1.0 1.0 1.75 1431.0 1.0 86.00 177.5 538.50 1008.0
Neisseria mucosa (SP346) 1.0 1.0 1.0 1.00 1323.0 1.0 77.50 150.5 400.25 686.0
Neisseria flavescens (SP68) 1.0 1.0 37.5 1384.25 10255.0 91.0 1488.75 2968.0 4689.50 12498.0
Streptococcus gordonii (SP144) 1.0 1.0 1.0 11.75 530.0 1.0 41.50 303.0 653.00 1783.0
Gemella sanguinis (SP285) 1.0 1.0 1.0 1.00 999.0 1.0 52.75 103.0 169.25 309.0
Streptococcus cristatus_clade_578 (SP24) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 27.5 116.75 442.0
Gemella haemolysans (SP41) 1.0 1.0 1.0 1.00 49.0 1.0 16.25 37.5 50.00 114.0
Veillonella multispecies_spp25_2 (SPP25) 1.0 1.0 201.0 3442.00 30343.0 148.0 3910.25 6848.5 7831.25 9422.0
Actinomyces sp. HMT175 (SP205) 1.0 1.0 1.0 1.00 1.0 1.0 10.75 22.5 34.50 102.0
Actinomyces sp. HMT169 (SP95) 1.0 1.0 1.0 1.00 1.0 1.0 4.75 12.5 22.75 70.0
Streptococcus sanguinis (SP179) 1.0 1.0 1.0 36.25 572.0 1.0 62.00 254.5 610.75 1217.0
Streptococcus oralis (SP80) 1.0 1.0 1.0 1.00 254.0 1.0 14.75 56.0 150.25 443.0
Streptococcus sp. HMT066 (SP246) 1.0 1.0 1.0 1.00 773.0 1.0 20.00 84.5 176.75 240.0
Campylobacter concisus_nov_96.963% (SPN15) 1.0 1.0 1.0 1.00 750.0 1.0 25.75 60.0 111.25 193.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.0 1.0 1.00 14.0 1.0 5.00 13.5 65.00 198.0
Solobacterium moorei (SP9) 1.0 1.0 1.0 1.00 1555.0 1.0 8.75 29.5 114.75 204.0
Veillonella sp. HMT780 (SP60) 1.0 1.0 1.0 1.00 1.0 1.0 2.50 9.0 17.50 211.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 1.0 1.0 1.0 1.00 305.0 1.0 7.50 14.5 23.00 31.0
Campylobacter showae (SP265) 1.0 1.0 1.0 1.00 365.0 1.0 13.25 23.5 40.00 159.0
Lancefieldella parvula (SP174) 1.0 1.0 1.0 1.00 10211.0 1.0 9.25 26.5 53.25 166.0
Streptococcus sanguinis_nov_97.782% (SPN62) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 9.0 13.75 30.0
Haemophilus sputorum (SP371) 1.0 1.0 1.0 1.00 1589.0 1.0 19.75 39.0 83.25 886.0
Neisseria subflava (SP200) 1.0 1.0 5.0 306.75 4569.0 15.0 243.25 428.0 534.50 2656.0
Lautropia mirabilis (SP106) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 8.0 14.25 44.0
Lachnoanaerobaculum gingivalis (SP20) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 12.5 22.25 58.0
Catonella morbi (SP58) 1.0 1.0 1.0 1.00 123.0 1.0 1.00 6.0 24.00 107.0
Abiotrophia defectiva (SP119) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 7.0 12.50 35.0
Prevotella melaninogenica (SP120) 1.0 1.0 1.0 1.00 493.0 1.0 17.25 34.0 98.75 450.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 12.0 24.25 126.0
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 5.0 9.25 40.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 1.0 1.0 1.00 4.0 1.0 1.00 6.0 8.75 73.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 1.0 1.0 1.0 1.00 148.0 1.0 1.00 25.0 62.75 173.0
Fusobacterium periodonticum (SP130) 1.0 1.0 1.0 102.25 5065.0 1.0 214.25 965.5 1360.25 2544.0
Streptococcus multispecies_spp29_2 (SPP29) 1.0 1.0 1.0 1.00 159.0 1.0 1.00 17.0 39.75 74.0
Actinomyces graevenitzii (SP42) 1.0 1.0 1.0 1.00 1.0 1.0 1.00 5.5 12.25 39.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.0 1.0 16.25 1486.0 1.0 17.75 188.5 591.50 991.0
Eikenella corrodens (SP104) 1.0 1.0 5.0 124.00 2042.0 1.0 86.50 223.5 491.50 1470.0
Mobiluncus curtisii_nov_96.694% (SPN405) 1.0 1.0 1.0 1.00 41.0 1.0 1.00 4.5 79.50 178.0
Streptococcus salivarius (SP89) 1.0 1.0 1.0 10.00 2146.0 1.0 13.25 604.0 1866.75 3004.0
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