QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 407
Neisseria mucosa (SP346) 400
Streptococcus sp. HMT423 (SP4) 399
Prevotella melaninogenica (SP120) 398
Neisseria elongata (SP145) 396
Campylobacter concisus (SP45) 394
Veillonella rogosae (SP90) 393
Aggregatibacter segnis (SP111) 392
Streptococcus parasanguinis_clade_411 (SP88) 390
Neisseria flava (SP53) 388
Campylobacter concisus_nov_96.963% (SPN15) 386
Aggregatibacter sp. HMT458 (SP136) 385
Haemophilus parainfluenzae (SP14) 382
Haemophilus sputorum (SP371) 382
Haemophilus sp. HMT036 (SP188) 382
Neisseria perflava (SP94) 380
Veillonella multispecies_spp6_3 (SPP6) 379
Veillonella multispecies_spp25_2 (SPP25) 378
Klebsiella pneumoniae (SP63) 377
Neisseria sp. HMT020 nov_94.070% (SPN248) 376
Aggregatibacter sp. HMT513 (SP252) 375
Prevotella nanceiensis (SP25) 372
Veillonella dispar (SP3) 371
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 370
Alloprevotella sp. HMT473 (SP181) 369
Actinomyces sp. HMT169 (SP95) 366
Porphyromonas catoniae (SP15) 364
Veillonella parvula (SP2) 364
Veillonella tobetsuensis (SP107) 363
Kingella oralis (SP299) 362
Haemophilus haemolyticus (SP163) 362
Neisseria subflava (SP200) 358
Campylobacter showae (SP265) 354
Prevotella salivae (SP47) 350
Alloprevotella sp. HMT308 (SP52) 349
Actinomyces sp. HMT175 nov_97.951% (SPN283) 348
Streptococcus oralis_subsp._dentisani_clade_398 (SP286) 346
Staphylococcus multispecies_spp18_3 (SPP18) 346
Veillonella atypica (SP35) 343
Haemophilus haemolyticus_nov_97.947% (SPN447) 343
Eikenella corrodens (SP104) 343
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 340
Fusobacterium periodonticum (SP130) 340
Lautropia mirabilis (SP106) 332
Neisseria sicca (SP614) 327
Prevotella jejuni (SP143) 327
Campylobacter sp. HMT044 (SP348) 327
Capnocytophaga sputigena (SP59) 325
Capnocytophaga endodontalis (SP67) 321
Alloprevotella tannerae (SP315) 320
Capnocytophaga gingivalis (SP110) 320
Prevotella histicola (SP79) 319
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 318
Prevotella shahii (SP165) 317
Prevotella pallens (SP76) 310
Neisseria cinerea (SP175) 308
Neisseria oralis (SP198) 307
Aggregatibacter aphrophilus (SP84) 306
Fusobacterium nucleatum (SP56) 306
Haemophilus paraphrohaemolyticus (SP291) 304
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final B -PMA Final B -PMA Final B -PMA Final B -PMA Final B -PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 9.0 68.25 934.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 171.25 1539.0
Streptococcus sp. HMT423 (SP4) 1.0 39.50 347.0 1107.25 4401.0 364.0 1421.25 2545.0 5243.00 8370.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 1.0 17.50 446.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 7.5 96.25 410.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 1.00 24.5 125.25 490.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.00 167.0 1242.00 2117.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 1.0 66.25 218.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 19.5 127.50 475.0 1.0 37.75 496.0 793.00 1420.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 15.00 526.0 863.50 2702.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 2.5 26.25 124.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 2.25 28.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 1.00 3910.0 9119.00 17787.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 1.0 23.75 220.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 5.25 35.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.00 581.0 1827.50 3048.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.00 105.0 341.75 587.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 1.00 839.0 6843.75 11377.0
Klebsiella pneumoniae (SP63) 1.0 7.00 35.5 239.75 1996.0 1.0 143.50 931.5 6043.75 29790.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.00 11.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 43.75 144.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 1.00 10.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 78.5 285.00 657.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 1.0 19.75 109.0 205.25 552.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 6.25 147.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 7.00 24.0 1.0 2.50 19.5 36.75 113.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 1.00 2.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.00 284.0 1586.75 2251.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 36.0 155.50 280.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 1.0 1.00 8.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 13.50 49.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 7.00 186.0 523.75 2502.0
Campylobacter showae (SP265) 1.0 16.75 67.0 210.00 345.0 1.0 1.00 1.0 21.25 154.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.00 1.0 1.00 1.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 6.5 26.25 135.0 1.0 1.00 1.0 1.00 5.0
Actinomyces sp. HMT175 nov_97.951% (SPN283) 1.0 1.00 1.0 1.00 20.0 1.0 1.00 8.0 22.25 56.0
Streptococcus oralis_subsp._dentisani_clade_398 (SP286) 1.0 1.00 1.0 1.00 12.0 1.0 1.00 1.0 19.25 50.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 30.0 1.0 1.00 8.0 38.00 874.0
Veillonella atypica (SP35) 39.0 523.00 974.0 2635.50 5770.0 1.0 1.00 215.5 1829.00 4339.0
Haemophilus haemolyticus_nov_97.947% (SPN447) 1.0 1.00 10.0 36.75 175.0 1.0 1.00 1.0 1.00 8.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.00 40.5 389.25 2350.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 1.0 4.00 36.5 79.25 234.0 1.0 1.00 1.0 14.25 27.0
Fusobacterium periodonticum (SP130) 14.0 151.25 661.0 2033.25 6726.0 1.0 1.00 90.5 938.00 2290.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.00 5.0 11.00 63.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.00 1.0 18.00 206.0
Prevotella jejuni (SP143) 1.0 1.00 3.5 16.75 63.0 1.0 1.00 1.0 1.00 1.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga sputigena (SP59) 1.0 1.00 4.5 17.50 42.0 1.0 1.00 1.0 1.00 4.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.00 1.0 1.00 1.0
Alloprevotella tannerae (SP315) 1.0 1.00 1.0 15.00 38.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga gingivalis (SP110) 1.0 1.00 1.0 30.25 72.0 1.0 1.00 1.0 1.00 1.0
Prevotella histicola (SP79) 1.0 1.00 2.0 18.25 50.0 1.0 1.00 1.0 1.00 6.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.00 1.0 1.00 4.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.00 1.0 1.00 5.0
Prevotella pallens (SP76) 1.0 1.00 1.0 24.75 87.0 1.0 1.00 1.0 1.00 1.0
Neisseria cinerea (SP175) 1.0 1.00 1.0 43.50 140.0 1.0 1.00 1.0 1.00 1.0
Neisseria oralis (SP198) 1.0 6.00 13.5 18.50 37.0 1.0 1.00 1.0 1.75 32.0
Aggregatibacter aphrophilus (SP84) 1.0 66.50 139.0 325.50 1695.0 1.0 1.00 1.0 222.25 2662.0
Fusobacterium nucleatum (SP56) 1.0 13.50 40.0 108.25 601.0 1.0 1.00 1.0 22.75 545.0
Haemophilus paraphrohaemolyticus (SP291) 1.0 1.00 5.5 15.25 67.0 1.0 1.00 1.0 1.00 11.0
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