ANCOM Volcano Plot


ANCOM statistical results

W
Aggregatibacter segnis (SP111) 435
Aggregatibacter sp. HMT458 (SP136) 434
Prevotella melaninogenica (SP120) 427
Streptococcus australis (SP17) 427
Porphyromonas pasteri (SP34) 420
Schaalia odontolytica (SP19) 419
Granulicatella adiacens (SP46) 416
Schaalia sp. HMT180 (SP109) 410
Schaalia sp. HMT172 (SP57) 408
Aggregatibacter sp. HMT513 (SP252) 408
Lancefieldella parvula (SP174) 402
Haemophilus sp. HMT036 (SP188) 402
Actinomyces sp. HMT169 (SP95) 392
Streptococcus sp. HMT066 (SP246) 391
Abiotrophia defectiva (SP119) 372
Campylobacter concisus (SP45) 368
Prevotella nanceiensis (SP25) 367
Neisseria elongata (SP145) 364
Campylobacter sp. HMT044 (SP348) 362
Neisseria sicca (SP614) 361
Porphyromonas catoniae (SP15) 360
Capnocytophaga endodontalis (SP67) 357
Neisseria flava (SP53) 355
Lautropia mirabilis (SP106) 354
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 353
Haemophilus haemolyticus (SP163) 353
Alloprevotella sp. HMT473 (SP181) 351
Neisseria mucosa (SP346) 339
Neisseria sp. HMT020 nov_94.070% (SPN248) 336
Kingella oralis (SP299) 327
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final D -PMA Final D -PMA Final D -PMA Final D -PMA Final D -PMA
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 9.75 32.5 133.75 346.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.5 14.25 60.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 17.25 34.0 98.75 450.0
Streptococcus australis (SP17) 1.0 1.00 7.0 87.75 309.0 1.0 67.75 194.5 269.50 464.0
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 86.00 177.5 538.50 1008.0
Schaalia odontolytica (SP19) 1.0 1.00 54.0 252.50 506.0 7.0 206.75 316.0 392.50 638.0
Granulicatella adiacens (SP46) 1.0 23.75 115.5 298.00 1004.0 12.0 254.00 921.5 1676.75 2220.0
Schaalia sp. HMT180 (SP109) 1.0 1.00 1.5 26.50 61.0 1.0 32.25 56.5 74.00 122.0
Schaalia sp. HMT172 (SP57) 1.0 1.00 3.5 21.75 61.0 1.0 20.50 35.0 52.50 85.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 11.5 56.75 205.0
Lancefieldella parvula (SP174) 1.0 1.00 1.0 13.00 83.0 1.0 9.25 26.5 53.25 166.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 13.0 32.25 65.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 7.00 24.0 1.0 4.75 12.5 22.75 70.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 4.5 51.50 179.0 1.0 20.00 84.5 176.75 240.0
Abiotrophia defectiva (SP119) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 7.0 12.50 35.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 9.0 99.00 277.5 496.25 1002.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 8.50 34.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 13.0 97.50 150.0 221.25 693.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.00 1.0 1.00 10.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.00 5.0 19.75 73.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 8.50 24.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.00 1.0 1.00 7.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 399.0 928.25 1342.0 1748.00 14713.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.00 8.0 14.25 44.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.00 1.0 1.00 6.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 8.5 22.25 76.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 4.0 69.25 245.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 77.50 150.5 400.25 686.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 6.0 8.75 73.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 3.0 5.25 32.0
Download table as TSV