QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus sp. HMT423 (SP4) 383
Prevotella melaninogenica (SP120) 381
Neisseria mucosa (SP346) 380
Porphyromonas pasteri (SP34) 375
Aggregatibacter segnis (SP111) 374
Rothia dentocariosa (SP201) 371
Streptococcus oralis (SP80) 362
Alloprevotella sp. HMT473 (SP181) 356
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 356
Neisseria sp. HMT020 nov_94.070% (SPN248) 350
Neisseria elongata (SP145) 347
Prevotella nanceiensis (SP25) 346
Veillonella dispar (SP3) 343
Campylobacter concisus (SP45) 341
Haemophilus sp. HMT036 (SP188) 338
Veillonella rogosae (SP90) 336
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 334
Veillonella multispecies_spp6_3 (SPP6) 331
Campylobacter concisus_nov_96.963% (SPN15) 329
Neisseria subflava (SP200) 327
Aggregatibacter sp. HMT458 (SP136) 325
Neisseria flava (SP53) 314
Aggregatibacter sp. HMT513 (SP252) 313
Lautropia mirabilis (SP106) 310
Streptococcus oralis_subsp._dentisani_clade_398 (SP286) 306
Kingella oralis (SP299) 305
Prevotella salivae (SP47) 304
Haemophilus parainfluenzae (SP14) 304
Veillonella tobetsuensis (SP107) 302
Alloprevotella sp. HMT308 (SP52) 302
Neisseria flavescens (SP68) 301
Veillonella parvula (SP2) 299
Haemophilus haemolyticus (SP163) 299
Neisseria sicca (SP614) 294
Porphyromonas catoniae (SP15) 292
Haemophilus sputorum (SP371) 292
Campylobacter sp. HMT044 (SP348) 287
Prevotella shahii (SP165) 287
Prevotella jejuni (SP143) 287
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final E -PMA Final E -PMA Final E -PMA Final E -PMA Final E -PMA
Streptococcus sp. HMT423 (SP4) 1.0 39.50 347.0 1107.25 4401.0 1426.0 4627.50 10064.5 60670.00 87731.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 4.0 22.50 95.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 153.00 422.0
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 148.0 469.75 1123.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 22.0 120.00 311.0
Rothia dentocariosa (SP201) 1.0 5.00 30.5 127.25 191.0 12.0 148.75 193.0 364.25 14478.0
Streptococcus oralis (SP80) 1.0 40.25 113.0 185.00 782.0 54.0 200.75 347.5 4051.75 27206.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 4.25 49.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 1.0 21.00 135.5 235.75 1285.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.00 13.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 11.75 75.5 150.00 432.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 1.00 3.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 130.5 169.25 301.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 20.25 71.0 486.00 1325.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 6.5 25.25 62.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 59.75 618.5 866.00 1284.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP269) 1.0 1.00 12.5 45.25 133.0 1.0 29.00 70.0 103.00 552.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 13.75 141.5 214.00 370.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 6.75 22.5 78.75 191.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 17.75 291.5 464.25 1800.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 13.5 24.00 48.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 32.0 387.25 887.5 1861.50 3635.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 26.5 81.50 351.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.00 3.5 7.00 36.0
Streptococcus oralis_subsp._dentisani_clade_398 (SP286) 1.0 1.00 1.0 1.00 12.0 1.0 1.00 1.0 11.00 20.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 1.0 3.00 6.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.00 1.0 1.00 1.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 74.0 251.75 4490.5 11965.25 14408.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 5.75 64.5 152.25 286.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 6.5 26.25 135.0 1.0 1.00 1.0 1.00 6.0
Neisseria flavescens (SP68) 586.0 2918.50 3827.0 6820.00 20640.0 1.0 156.25 1480.0 3204.75 7139.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 20.25 893.5 1468.25 2001.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 3.5 24.00 75.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.00 1.0 26.50 127.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 3.75 36.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 7.50 18.0 42.00 100.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.00 1.0 1.00 4.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.00 1.0 1.00 4.0
Prevotella jejuni (SP143) 1.0 1.00 3.5 16.75 63.0 1.0 1.00 1.0 1.00 1.0
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