QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 391
Streptococcus parasanguinis_clade_411 (SP88) 377
Streptococcus salivarius (SP89) 374
Neisseria elongata (SP145) 372
Neisseria mucosa (SP346) 372
Prevotella melaninogenica (SP120) 372
Veillonella rogosae (SP90) 371
Streptococcus sp. HMT423 (SP4) 371
Neisseria flava (SP53) 370
Aggregatibacter segnis (SP111) 366
Campylobacter concisus_nov_96.963% (SPN15) 364
Campylobacter concisus (SP45) 363
Haemophilus parainfluenzae (SP14) 359
Aggregatibacter sp. HMT458 (SP136) 357
Haemophilus sp. HMT036 (SP188) 357
Aggregatibacter sp. HMT513 (SP252) 355
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 354
Neisseria perflava (SP94) 353
Veillonella multispecies_spp6_3 (SPP6) 352
Prevotella nanceiensis (SP25) 352
Veillonella dispar (SP3) 350
Porphyromonas catoniae (SP15) 350
Veillonella parvula (SP2) 349
Haemophilus sputorum (SP371) 348
Neisseria sp. HMT020 nov_94.070% (SPN248) 346
Veillonella multispecies_spp25_2 (SPP25) 345
Alloprevotella sp. HMT473 (SP181) 344
Kingella oralis (SP299) 343
Veillonella tobetsuensis (SP107) 342
Actinomyces sp. HMT169 (SP95) 338
Haemophilus haemolyticus (SP163) 338
Streptococcus oralis_subsp._dentisani_clade_398 (SP286) 331
Staphylococcus multispecies_spp18_3 (SPP18) 331
Neisseria sicca (SP614) 329
Streptococcus oralis (SP80) 326
Abiotrophia defectiva (SP119) 324
Neisseria subflava (SP200) 324
Prevotella salivae (SP47) 320
Actinomyces sp. HMT175 nov_97.951% (SPN283) 320
Lautropia mirabilis (SP106) 318
Veillonella sp. HMT780 (SP60) 310
Klebsiella pneumoniae (SP63) 309
Alloprevotella tannerae (SP315) 307
Prevotella jejuni (SP143) 306
Capnocytophaga sputigena (SP59) 306
Prevotella histicola (SP79) 306
Campylobacter showae (SP265) 305
Capnocytophaga endodontalis (SP67) 304
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 302
Capnocytophaga gingivalis (SP110) 302
Campylobacter sp. HMT044 (SP348) 297
Prevotella shahii (SP165) 296
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final G -PMA Final G -PMA Final G -PMA Final G -PMA Final G -PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 11.0 189.25 307.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 19.5 127.50 475.0 1.0 203.50 813.0 1082.00 1239.0
Streptococcus salivarius (SP89) 1.0 31.25 183.5 755.25 4903.0 116.0 2204.25 3874.0 6148.00 13626.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 49.5 112.75 281.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 17.0 131.50 387.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 3.0 147.00 316.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.00 705.0 892.00 1300.0
Streptococcus sp. HMT423 (SP4) 1.0 39.50 347.0 1107.25 4401.0 1327.0 1935.50 2661.0 4310.75 9244.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 37.75 601.5 885.00 1439.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 4.00 26.0 127.00 300.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 6.0 35.25 73.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 17.25 63.5 196.25 441.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 75.00 3053.5 5006.75 7963.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 16.25 35.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 12.00 60.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 28.25 185.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 12.0 28.50 138.0 285.50 436.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.00 974.0 1470.25 3130.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.00 149.5 211.50 424.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 1.00 4.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 108.5 176.00 574.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 1.00 1.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.00 407.0 527.25 1767.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 5.5 32.00 222.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.75 13.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 42.75 1594.0 2201.25 5599.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 37.50 100.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 1.0 1.00 6.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 58.0 100.75 186.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 7.00 24.0 1.0 5.75 14.0 25.25 51.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 22.00 65.0
Streptococcus oralis_subsp._dentisani_clade_398 (SP286) 1.0 1.00 1.0 1.00 12.0 1.0 1.00 7.0 18.50 64.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 30.0 1.0 1.00 7.5 62.50 2667.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.00 1.0 3.50 55.0
Streptococcus oralis (SP80) 1.0 40.25 113.0 185.00 782.0 19.0 179.25 276.5 619.50 1109.0
Abiotrophia defectiva (SP119) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 9.5 18.00 31.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 57.00 302.5 405.00 1099.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.00 1.0 1.00 1.0
Actinomyces sp. HMT175 nov_97.951% (SPN283) 1.0 1.00 1.0 1.00 20.0 1.0 1.00 11.0 21.00 32.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.00 2.0 9.00 74.0
Veillonella sp. HMT780 (SP60) 1.0 1.00 8.5 13.00 101.0 1.0 1.00 1.0 1.00 12.0
Klebsiella pneumoniae (SP63) 1.0 7.00 35.5 239.75 1996.0 1.0 22.25 426.0 3026.75 27056.0
Alloprevotella tannerae (SP315) 1.0 1.00 1.0 15.00 38.0 1.0 1.00 1.0 1.00 1.0
Prevotella jejuni (SP143) 1.0 1.00 3.5 16.75 63.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga sputigena (SP59) 1.0 1.00 4.5 17.50 42.0 1.0 1.00 1.0 1.00 1.0
Prevotella histicola (SP79) 1.0 1.00 2.0 18.25 50.0 1.0 1.00 1.0 1.00 1.0
Campylobacter showae (SP265) 1.0 16.75 67.0 210.00 345.0 1.0 1.00 6.0 23.25 116.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.00 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.00 1.0 1.00 5.0
Capnocytophaga gingivalis (SP110) 1.0 1.00 1.0 30.25 72.0 1.0 1.00 1.0 1.00 1.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.00 1.0 1.00 7.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.00 1.0 1.00 4.0
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