QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 392
Neisseria mucosa (SP346) 384
Neisseria flava (SP53) 381
Streptococcus sp. HMT423 (SP4) 381
Streptococcus parasanguinis_clade_411 (SP88) 380
Veillonella rogosae (SP90) 379
Neisseria elongata (SP145) 379
Haemophilus parainfluenzae (SP14) 378
Prevotella melaninogenica (SP120) 377
Aggregatibacter segnis (SP111) 371
Campylobacter concisus_nov_96.963% (SPN15) 370
Haemophilus sputorum (SP371) 367
Streptococcus salivarius (SP89) 367
Campylobacter concisus (SP45) 367
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 367
Neisseria perflava (SP94) 367
Veillonella multispecies_spp6_3 (SPP6) 365
Aggregatibacter sp. HMT458 (SP136) 365
Haemophilus sp. HMT036 (SP188) 365
Neisseria sp. HMT020 nov_94.070% (SPN248) 362
Veillonella dispar (SP3) 358
Veillonella tobetsuensis (SP107) 353
Prevotella nanceiensis (SP25) 352
Porphyromonas catoniae (SP15) 352
Alloprevotella sp. HMT473 (SP181) 351
Aggregatibacter sp. HMT513 (SP252) 350
Haemophilus haemolyticus (SP163) 347
Neisseria subflava (SP200) 344
Veillonella parvula (SP2) 342
Kingella oralis (SP299) 338
Streptococcus oralis (SP80) 337
Salmonella enterica (SP178) 332
Veillonella multispecies_spp25_2 (SPP25) 332
Actinomyces sp. HMT175 nov_97.951% (SPN283) 332
Staphylococcus multispecies_spp18_3 (SPP18) 331
Prevotella salivae (SP47) 324
Alloprevotella sp. HMT308 (SP52) 322
Neisseria oralis (SP198) 318
Lautropia mirabilis (SP106) 317
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 310
Capnocytophaga sputigena (SP59) 310
Neisseria sicca (SP614) 310
Capnocytophaga endodontalis (SP67) 309
Campylobacter sp. HMT044 (SP348) 306
Prevotella histicola (SP79) 305
Eikenella corrodens (SP104) 303
Alloprevotella tannerae (SP315) 301
Prevotella shahii (SP165) 301
Capnocytophaga gingivalis (SP110) 296
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final I -PMA Final I -PMA Final I -PMA Final I -PMA Final I -PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 6.5 220.50 425.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 111.00 301.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 12.75 347.5 702.00 2195.0
Streptococcus sp. HMT423 (SP4) 1.0 39.50 347.0 1107.25 4401.0 910.0 1463.75 2854.5 4594.50 23392.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 19.5 127.50 475.0 1.0 53.50 657.0 1022.00 2013.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.00 530.0 877.50 1569.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 22.5 85.75 260.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 10.25 2160.0 3992.00 7105.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 1.0 116.00 277.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 21.0 111.75 247.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 2.5 22.50 66.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 1.0 20.75 131.0
Streptococcus salivarius (SP89) 1.0 31.25 183.5 755.25 4903.0 1.0 540.50 3522.5 5010.75 8787.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 8.00 50.0 168.75 1356.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 11.0 31.00 139.0 292.50 1684.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.00 812.0 1512.25 5349.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.00 169.5 276.00 497.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 11.00 62.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 12.25 55.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.00 5.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 150.5 225.25 366.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 41.0 99.75 190.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 1.00 5.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 1.00 1.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 22.50 77.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 70.50 164.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 20.00 49.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 4.75 216.5 401.50 3078.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.00 668.5 1048.25 1823.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 1.0 1.00 7.0
Streptococcus oralis (SP80) 1.0 40.25 113.0 185.00 782.0 44.0 152.00 227.0 451.75 4681.0
Salmonella enterica (SP178) 1.0 1.00 1.0 1.00 1771.0 1.0 1.00 384.5 3064.00 7643.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 10.50 2834.0 4858.25 8191.0
Actinomyces sp. HMT175 nov_97.951% (SPN283) 1.0 1.00 1.0 1.00 20.0 1.0 1.00 10.5 22.25 44.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 30.0 1.0 1.00 10.5 23.25 783.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.00 1.0 1.00 1.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 6.5 26.25 135.0 1.0 1.00 1.0 1.00 10.0
Neisseria oralis (SP198) 1.0 6.00 13.5 18.50 37.0 1.0 1.00 1.0 1.00 20.0
Lautropia mirabilis (SP106) 3.0 11.00 23.5 56.50 326.0 1.0 1.00 4.0 9.00 103.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga sputigena (SP59) 1.0 1.00 4.5 17.50 42.0 1.0 1.00 1.0 1.00 1.0
Neisseria sicca (SP614) 1.0 23.00 79.0 152.50 1177.0 1.0 1.00 1.0 9.25 1194.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.00 1.0 1.00 1.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.00 1.0 1.00 1.0
Prevotella histicola (SP79) 1.0 1.00 2.0 18.25 50.0 1.0 1.00 1.0 1.00 1.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.00 47.0 777.75 2239.0
Alloprevotella tannerae (SP315) 1.0 1.00 1.0 15.00 38.0 1.0 1.00 1.0 1.00 1.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.00 1.0 1.00 4.0
Capnocytophaga gingivalis (SP110) 1.0 1.00 1.0 30.25 72.0 1.0 1.00 1.0 1.00 3.0
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