QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 385
Prevotella melaninogenica (SP120) 385
Streptococcus sp. HMT423 (SP4) 377
Neisseria mucosa (SP346) 377
Streptococcus parasanguinis_clade_411 (SP88) 375
Campylobacter concisus (SP45) 373
Campylobacter concisus_nov_96.963% (SPN15) 372
Streptococcus salivarius (SP89) 372
Alloprevotella sp. HMT473 (SP181) 370
Streptococcus multispecies_spp53_2 (SPP53) 367
Neisseria sp. HMT020 nov_94.070% (SPN248) 363
Aggregatibacter sp. HMT458 (SP136) 362
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 359
Neisseria elongata (SP145) 355
Campylobacter showae (SP265) 354
Prevotella nanceiensis (SP25) 351
Streptococcus sp. HMT066 (SP246) 349
Haemophilus sp. HMT036 (SP188) 348
Granulicatella adiacens (SP46) 345
Actinomyces sp. HMT175 (SP205) 344
Staphylococcus multispecies_spp18_3 (SPP18) 343
Porphyromonas catoniae (SP15) 343
Aggregatibacter segnis (SP111) 337
Kingella oralis (SP299) 335
Abiotrophia defectiva (SP119) 329
Haemophilus haemolyticus (SP163) 328
Neisseria flava (SP53) 324
Alloprevotella sp. HMT308 (SP52) 320
Prevotella salivae (SP47) 319
Haemophilus sputorum (SP371) 316
Veillonella dispar (SP3) 314
Aggregatibacter sp. HMT513 (SP252) 313
Haemophilus parainfluenzae (SP14) 310
Veillonella rogosae (SP90) 309
Neisseria perflava (SP94) 307
Neisseria oralis (SP198) 307
Streptococcus mitis (SP249) 306
Campylobacter sp. HMT044 (SP348) 305
Veillonella multispecies_spp6_3 (SPP6) 303
Prevotella jejuni (SP143) 303
Capnocytophaga endodontalis (SP67) 300
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 300
Capnocytophaga sputigena (SP59) 298
Alloprevotella tannerae (SP315) 296
Veillonella sp. HMT780 (SP60) 296
Prevotella shahii (SP165) 296
Prevotella histicola (SP79) 292
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final J -PMA Final J -PMA Final J -PMA Final J -PMA Final J -PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 50.5 142.75 349.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 4.0 51.75 201.0
Streptococcus sp. HMT423 (SP4) 1.0 39.50 347.0 1107.25 4401.0 1226.0 2636.75 4287.0 7213.00 16134.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 48.5 118.00 556.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 19.5 127.50 475.0 14.0 151.25 506.5 652.25 1956.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 12.25 35.0 166.25 750.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 9.5 24.50 42.0
Streptococcus salivarius (SP89) 1.0 31.25 183.5 755.25 4903.0 121.0 2088.50 3666.0 6970.50 14777.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 1.00 13.0
Streptococcus multispecies_spp53_2 (SPP53) 1.0 1.00 54.5 499.25 1969.0 4.0 140.00 1434.5 2295.00 3592.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.00 1.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 18.25 52.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 1.00 13.0 33.00 109.0 10.0 34.25 107.5 278.75 656.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 11.00 61.5 176.00 592.0
Campylobacter showae (SP265) 1.0 16.75 67.0 210.00 345.0 1.0 1.00 1.0 6.75 103.0
Prevotella nanceiensis (SP25) 1.0 1.00 33.5 145.50 305.0 1.0 1.00 1.0 1.00 1.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 4.5 51.50 179.0 1.0 8.00 175.0 270.50 589.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 32.75 82.0
Granulicatella adiacens (SP46) 1.0 23.75 115.5 298.00 1004.0 23.0 93.00 1088.0 1253.25 2461.0
Actinomyces sp. HMT175 (SP205) 1.0 1.00 1.0 19.00 40.0 1.0 15.75 25.0 35.25 51.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 30.0 1.0 1.00 16.0 91.75 635.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 1.00 6.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 16.00 55.5 255.25 652.0
Kingella oralis (SP299) 1.0 4.00 14.0 43.25 179.0 1.0 1.00 1.0 1.00 6.0
Abiotrophia defectiva (SP119) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 8.5 15.00 25.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 26.50 62.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 45.0 389.75 775.0 1736.25 4996.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 6.5 26.25 135.0 1.0 1.00 1.0 1.00 1.0
Prevotella salivae (SP47) 1.0 1.00 8.0 41.50 73.0 1.0 1.00 1.0 1.00 1.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 14.0 43.25 228.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 16.75 145.5 202.75 448.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 45.5 93.00 324.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 36.0 356.75 8327.5 10937.00 15214.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 95.0 428.00 725.0 1117.25 1380.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 119.50 692.0 1642.50 5051.0
Neisseria oralis (SP198) 1.0 6.00 13.5 18.50 37.0 1.0 1.00 1.0 1.75 10.0
Streptococcus mitis (SP249) 1.0 1.00 1.0 122.75 378.0 1.0 1.00 1.0 1.00 16.0
Campylobacter sp. HMT044 (SP348) 1.0 1.00 1.0 48.50 252.0 1.0 1.00 1.0 1.00 1.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 69.00 204.5 301.50 361.0
Prevotella jejuni (SP143) 1.0 1.00 3.5 16.75 63.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga endodontalis (SP67) 1.0 1.00 2.5 19.00 51.0 1.0 1.00 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP196) 1.0 1.00 4.5 20.25 47.0 1.0 1.00 1.0 1.00 1.0
Capnocytophaga sputigena (SP59) 1.0 1.00 4.5 17.50 42.0 1.0 1.00 1.0 1.00 4.0
Alloprevotella tannerae (SP315) 1.0 1.00 1.0 15.00 38.0 1.0 1.00 1.0 1.00 1.0
Veillonella sp. HMT780 (SP60) 1.0 1.00 8.5 13.00 101.0 1.0 1.00 1.0 1.00 11.0
Prevotella shahii (SP165) 1.0 1.00 3.5 27.00 91.0 1.0 1.00 1.0 1.00 4.0
Prevotella histicola (SP79) 1.0 1.00 2.0 18.25 50.0 1.0 1.00 1.0 1.00 4.0
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