QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Neisseria flava (SP53) 402
Streptococcus multispecies_spp29_2 (SPP29) 399
Leptotrichia sp. HMT417 (SP185) 395
Haemophilus pittmaniae (SP169) 389
Streptococcus mitis (SP249) 387
Aggregatibacter segnis (SP111) 386
Klebsiella pneumoniae (SP63) 385
Veillonella multispecies_spp25_2 (SPP25) 383
Neisseria elongata (SP145) 383
Neisseria mucosa (SP346) 383
Leptotrichia sp. HMT215 (SP40) 381
Streptococcus australis (SP17) 379
Streptococcus infantis_clade_431 (SP148) 378
Schaalia odontolytica (SP19) 375
Oribacterium sinus (SP123) 372
Streptococcus parasanguinis_clade_411 (SP88) 370
Prevotella pallens (SP76) 367
Leptotrichia sp. HMT218 (SP232) 362
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 357
Catonella morbi (SP58) 356
Pseudoleptotrichia sp. HMT221 (SP55) 356
Streptococcus sp. HMT066 (SP246) 352
Veillonella parvula (SP2) 351
Prevotella sp. HMT306 (SP118) 346
Prevotella sp. HMT443 (SP73) 344
Streptococcus chosunense (SP182) 344
Aggregatibacter aphrophilus (SP84) 343
Oribacterium multispecies_spp10_2 (SPP10) 341
Capnocytophaga sp. HMT878 (SP507) 341
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 340
Fusobacterium hwasookii (SP127) 336
Prevotella intermedia (SP324) 335
Porphyromonas sp. HMT930 (SP131) 330
Streptococcus downii (SP70) 329
Alloprevotella sp. HMT308 (SP52) 323
Alloprevotella rava (SP30) 322
Lachnoanaerobaculum gingivalis (SP20) 317
Actinomyces sp. HMT169 (SP95) 316
Prevotella sp. HMT309 (SP258) 315
Schaalia lingnae (SP49) 314
Eikenella corrodens (SP104) 314
Streptococcus sp. HMT064 (SP443) 312
Tannerella serpentiformis (SP441) 311
Riemerella sp. HMT322 (SP51) 310
Schaalia sp. HMT172 (SP57) 303
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline P1 +PMA Baseline P1 +PMA Baseline P1 +PMA Baseline P1 +PMA Baseline P1 +PMA Saliva P1 +PMA Saliva P1 +PMA Saliva P1 +PMA Saliva P1 +PMA Saliva P1 +PMA
Neisseria flava (SP53) 4836.0 8839.75 11536.0 15812.00 25086.0 126.0 158.75 200.5 251.25 384.0
Streptococcus multispecies_spp29_2 (SPP29) 1.0 1.00 1.0 1.00 1.0 870.0 899.00 1006.0 1100.25 1272.0
Leptotrichia sp. HMT417 (SP185) 1.0 1.00 1.0 1.00 1.0 589.0 657.25 800.0 1080.75 1343.0
Haemophilus pittmaniae (SP169) 46.0 99.50 114.5 150.00 328.0 1.0 1.00 8.5 18.25 19.0
Streptococcus mitis (SP249) 1.0 1.00 1.0 1.00 1.0 425.0 483.25 616.0 733.00 860.0
Aggregatibacter segnis (SP111) 545.0 685.00 987.5 1468.25 2236.0 52.0 65.75 108.5 137.75 171.0
Klebsiella pneumoniae (SP63) 7.0 24.50 163.5 356.50 1996.0 1.0 1.00 1.0 1.00 4.0
Veillonella multispecies_spp25_2 (SPP25) 2338.0 4694.00 7334.5 12605.75 14514.0 288.0 332.25 411.5 477.25 715.0
Neisseria elongata (SP145) 159.0 740.75 1471.5 2857.50 4223.0 57.0 93.50 113.0 125.75 165.0
Neisseria mucosa (SP346) 673.0 1375.25 2152.0 3832.00 4662.0 128.0 203.50 225.0 245.00 387.0
Leptotrichia sp. HMT215 (SP40) 1.0 1.00 1.0 1.00 1.0 176.0 413.25 454.0 477.50 605.0
Streptococcus australis (SP17) 1.0 1.00 1.0 1.00 1.0 232.0 325.75 365.5 385.00 453.0
Streptococcus infantis_clade_431 (SP148) 1.0 1.00 1.0 1.00 1.0 230.0 261.75 284.5 324.50 352.0
Schaalia odontolytica (SP19) 1.0 1.00 1.0 1.00 6.0 686.0 752.00 816.0 970.00 1020.0
Oribacterium sinus (SP123) 1.0 1.00 1.0 1.00 1.0 152.0 258.50 283.0 293.25 302.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 1.0 1.00 1.0 193.0 199.00 211.0 234.25 259.0
Prevotella pallens (SP76) 1.0 1.00 1.0 1.00 11.0 409.0 561.25 665.5 765.25 778.0
Leptotrichia sp. HMT218 (SP232) 1.0 1.00 1.0 1.00 1.0 147.0 163.75 182.5 196.00 244.0
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 1.0 1.00 1.0 1.00 1.0 102.0 169.50 262.0 573.50 980.0
Catonella morbi (SP58) 1.0 1.00 1.0 1.00 1.0 128.0 144.75 152.0 164.50 173.0
Pseudoleptotrichia sp. HMT221 (SP55) 1.0 1.00 1.0 1.00 1.0 128.0 142.25 153.5 176.00 189.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 1.0 1.00 1.0 101.0 122.25 140.5 149.75 203.0
Veillonella parvula (SP2) 630.0 1153.75 1608.0 2504.75 3042.0 176.0 286.00 367.5 415.25 429.0
Prevotella sp. HMT306 (SP118) 1.0 1.00 1.0 1.00 3.0 134.0 144.00 163.0 168.50 215.0
Prevotella sp. HMT443 (SP73) 1.0 1.00 1.0 1.00 1.0 91.0 95.25 103.5 120.75 156.0
Streptococcus chosunense (SP182) 1.0 1.00 1.0 1.00 1.0 81.0 87.75 103.0 122.00 157.0
Aggregatibacter aphrophilus (SP84) 94.0 141.50 305.0 459.50 1268.0 27.0 36.50 47.5 60.75 71.0
Oribacterium multispecies_spp10_2 (SPP10) 1.0 1.00 1.0 1.00 1.0 77.0 104.25 117.5 138.25 161.0
Capnocytophaga sp. HMT878 (SP507) 1.0 1.00 1.0 1.00 1.0 98.0 104.50 117.5 189.75 360.0
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 1.0 1.00 1.0 1.00 1.0 79.0 83.50 91.5 101.75 117.0
Fusobacterium hwasookii (SP127) 1.0 1.00 1.0 1.00 1.0 62.0 74.25 82.5 97.50 127.0
Prevotella intermedia (SP324) 1.0 1.00 1.0 1.00 1.0 65.0 78.75 91.0 107.75 114.0
Porphyromonas sp. HMT930 (SP131) 1.0 1.00 1.0 1.00 1.0 54.0 79.50 93.5 104.50 183.0
Streptococcus downii (SP70) 1.0 1.00 1.0 1.00 7.0 122.0 143.75 179.5 216.75 262.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 1.0 2.00 19.0 377.0 404.00 446.5 498.00 542.0
Alloprevotella rava (SP30) 1.0 1.00 1.0 1.00 1.0 48.0 65.25 85.0 94.25 105.0
Lachnoanaerobaculum gingivalis (SP20) 1.0 1.00 1.0 1.00 1.0 30.0 78.50 103.0 116.25 120.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 1.00 1.0 40.0 57.75 78.0 83.25 108.0
Prevotella sp. HMT309 (SP258) 1.0 1.00 1.0 1.00 1.0 42.0 51.75 71.5 80.00 119.0
Schaalia lingnae (SP49) 1.0 1.00 1.0 1.00 4.0 78.0 85.25 92.0 104.75 117.0
Eikenella corrodens (SP104) 104.0 150.00 193.0 253.25 387.0 59.0 63.25 71.0 77.25 139.0
Streptococcus sp. HMT064 (SP443) 1.0 1.00 1.0 1.00 1.0 41.0 50.00 56.0 60.50 66.0
Tannerella serpentiformis (SP441) 1.0 1.00 1.0 1.00 1.0 43.0 58.50 64.0 104.75 314.0
Riemerella sp. HMT322 (SP51) 1.0 1.00 1.0 1.00 9.0 169.0 193.50 229.0 255.50 305.0
Schaalia sp. HMT172 (SP57) 1.0 1.00 1.0 1.00 6.0 85.0 95.25 102.5 128.50 145.0
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