QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Leptotrichia sp. HMT417 (SP185) 500
Neisseria flava (SP53) 499
Streptococcus mitis (SP249) 496
Streptococcus multispecies_spp29_2 (SPP29) 495
Aggregatibacter segnis (SP111) 492
Klebsiella pneumoniae (SP63) 491
Veillonella multispecies_spp25_2 (SPP25) 490
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 488
Schaalia odontolytica (SP19) 486
Streptococcus australis (SP17) 482
Leptotrichia sp. HMT215 (SP40) 482
Streptococcus parasanguinis_clade_411 (SP88) 481
Oribacterium sinus (SP123) 480
Eikenella corrodens (SP104) 475
Prevotella pallens (SP76) 475
Neisseria sicca (SP614) 475
Catonella morbi (SP58) 474
Neisseria elongata (SP145) 473
Streptococcus sp. HMT066 (SP246) 473
Alloprevotella sp. HMT308 (SP52) 471
Veillonella parvula (SP2) 466
Streptococcus downii (SP70) 464
Streptococcus infantis_clade_431 (SP148) 464
Streptococcus chosunense (SP182) 463
Oribacterium multispecies_spp10_2 (SPP10) 463
Pseudoleptotrichia sp. HMT221 (SP55) 460
Neisseria subflava (SP200) 458
Haemophilus parainfluenzae (SP14) 456
Alloprevotella rava (SP30) 455
Actinomyces sp. HMT169 (SP95) 454
Schaalia sp. HMT172 (SP57) 454
Leptotrichia sp. HMT218 (SP232) 453
Prevotella sp. HMT306 (SP118) 451
Lancefieldella parvula (SP174) 445
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 443
Riemerella sp. HMT322 (SP51) 443
Peptostreptococcus stomatis (SP321) 442
Schaalia lingnae (SP49) 441
Prevotella sp. HMT443 (SP73) 440
Lachnoanaerobaculum orale (SP220) 440
Selenomonas sp. HMT136 (SP121) 439
Megasphaera micronuciformis (SP167) 437
Lachnoanaerobaculum gingivalis (SP20) 436
Prevotella jejuni (SP143) 436
Aggregatibacter sp. HMT513 (SP252) 435
Solobacterium moorei (SP9) 434
Actinomyces graevenitzii (SP42) 433
Prevotella sp. HMT305 nov_93.865% (SPN148) 433
Alloprevotella sp. HMT473 nov_97.347% (SPN70) 431
Streptococcus sp. HMT061 (SP366) 429
Tannerella serpentiformis (SP441) 429
Ottowia sp. HMT894 (SP333) 429
Alloprevotella tannerae (SP315) 428
Stomatobaculum sp. HMT097 (SP5) 427
Prevotella nigrescens (SP98) 427
Prevotella sp. HMT309 (SP258) 426
Prevotella aurantiaca (SP288) 425
Porphyromonas endodontalis (SP306) 416
Prevotella vespertina (SP204) 416
Prevotella histicola (SP79) 415
Prevotella scopos (SP209) 415
Streptococcus sp. HMT074 (SP12) 413
Cardiobacterium hominis (SP468) 411
Prevotella pleuritidis (SP492) 411
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP422) 410
Alloprevotella sp. HMT914 (SP126) 410
Mogibacterium diversum (SP83) 410
Prevotella oris (SP13) 407
Schaalia sp. HMT180 (SP109) 405
Absconditabacteria_(SR1)_[G-1] bacterium HMT875 (SP553) 405
Leptotrichia hongkongensis (SP575) 404
Streptococcus koreensis (SP280) 402
Ruminococcaceae_[G-2] bacterium HMT085 (SP436) 401
Parvimonas multispecies_sppn3_2_nov_96.842% (SPPN3) 400
Actinomyces sp. HMT448 (SP263) 398
Actinomyces massiliensis (SP374) 395
Leptotrichia sp. HMT392 (SP430) 394
Prevotella sp. HMT315 (SP311) 394
Arachnia propionica (SP275) 390
Dialister invisus (SP454) 389
Prevotella oulorum (SP414) 388
Streptococcus multispecies_spp53_2 (SPP53) 388
Peptidiphaga sp. HMT183 (SP394) 387
Streptococcus sp. HMT057 (SP103) 387
Weeksellaceae_[G-1] sp. HMT931 (SP122) 384
Bacteroidales_[G-2] bacterium HMT274 (SP295) 384
Fusobacterium nucleatum_subsp._vincentii (SP323) 381
Lachnospiraceae_[G-3] bacterium HMT100 (SP78) 380
Prevotella sp. HMT300 (SP298) 380
Streptococcus sanguinis (SP179) 380
Moraxella boevrei_nov_92.575% (SPN55) 378
Prevotella sp. HMT475 (SP50) 377
Butyrivibrio sp. HMT455 (SP273) 374
Corynebacterium matruchotii (SP170) 374
Leptotrichia sp. HMT225 (SP520) 374
Ruminococcaceae_[G-1] bacterium HMT075 (SP64) 374
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline +PMA Baseline +PMA Baseline +PMA Baseline +PMA Baseline +PMA Saliva +PMA Saliva +PMA Saliva +PMA Saliva +PMA Saliva +PMA
Leptotrichia sp. HMT417 (SP185) 1.0 1.00 1.0 1.00 1.0 589.0 671.25 800.0 951.75 1364.0
Neisseria flava (SP53) 4836.0 7659.25 9731.0 13893.25 25086.0 126.0 209.75 292.5 358.00 384.0
Streptococcus mitis (SP249) 1.0 1.00 1.0 1.00 1.0 419.0 515.00 587.0 625.00 860.0
Streptococcus multispecies_spp29_2 (SPP29) 1.0 1.00 1.0 1.00 10.0 546.0 577.00 789.0 988.50 1272.0
Aggregatibacter segnis (SP111) 247.0 507.50 579.0 959.25 2236.0 10.0 23.50 41.0 107.75 171.0
Klebsiella pneumoniae (SP63) 1.0 20.00 77.5 348.25 1996.0 1.0 1.00 1.0 1.50 4.0
Veillonella multispecies_spp25_2 (SPP25) 2338.0 4694.00 7918.5 11432.00 14514.0 288.0 423.75 489.5 572.50 715.0
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 1.0 1.00 1.0 1.00 1.0 102.0 236.25 397.0 657.50 980.0
Schaalia odontolytica (SP19) 1.0 1.00 1.0 6.00 14.0 686.0 836.00 946.5 1011.00 1227.0
Streptococcus australis (SP17) 1.0 1.00 1.0 1.00 1.0 149.0 227.25 260.0 364.75 453.0
Leptotrichia sp. HMT215 (SP40) 1.0 1.00 1.0 1.00 4.0 176.0 223.50 317.0 450.50 605.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 1.0 1.00 1.0 193.0 213.25 242.0 287.75 326.0
Oribacterium sinus (SP123) 1.0 1.00 1.0 1.00 1.0 152.0 184.75 242.0 291.50 302.0
Eikenella corrodens (SP104) 93.0 150.00 193.0 322.25 477.0 21.0 25.75 50.0 70.50 139.0
Prevotella pallens (SP76) 1.0 1.00 1.0 11.50 23.0 409.0 702.25 936.0 1227.00 1395.0
Neisseria sicca (SP614) 1.0 54.75 134.0 207.75 1177.0 1.0 1.00 8.0 17.50 37.0
Catonella morbi (SP58) 1.0 1.00 1.0 1.00 1.0 128.0 148.25 157.5 173.00 203.0
Neisseria elongata (SP145) 35.0 142.50 1162.0 2739.00 4223.0 53.0 57.75 72.5 108.50 165.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 1.0 1.00 1.0 101.0 133.00 149.5 177.50 214.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 1.0 2.00 19.0 377.0 457.25 525.0 581.75 761.0
Veillonella parvula (SP2) 630.0 1224.50 1928.5 2251.00 3042.0 176.0 373.75 428.0 503.75 566.0
Streptococcus downii (SP70) 1.0 1.00 1.0 1.00 7.0 122.0 179.75 210.0 229.50 262.0
Streptococcus infantis_clade_431 (SP148) 1.0 1.00 1.0 1.00 19.0 230.0 294.75 340.5 368.75 439.0
Streptococcus chosunense (SP182) 1.0 1.00 1.0 1.00 1.0 81.0 102.75 124.0 145.50 157.0
Oribacterium multispecies_spp10_2 (SPP10) 1.0 1.00 1.0 1.00 1.0 77.0 103.25 121.0 144.75 167.0
Pseudoleptotrichia sp. HMT221 (SP55) 1.0 1.00 1.0 1.00 6.0 100.0 123.25 135.0 166.00 214.0
Neisseria subflava (SP200) 321.0 582.25 808.0 1028.50 1632.0 115.0 147.25 279.0 468.75 509.0
Haemophilus parainfluenzae (SP14) 6547.0 9704.75 13540.5 15763.75 27948.0 3784.0 4235.00 4580.0 5103.75 6059.0
Alloprevotella rava (SP30) 1.0 1.00 1.0 1.00 1.0 48.0 87.00 110.5 141.25 163.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 1.00 1.0 40.0 69.75 88.5 108.25 119.0
Schaalia sp. HMT172 (SP57) 1.0 1.00 1.0 1.00 6.0 85.0 102.75 126.0 149.75 174.0
Leptotrichia sp. HMT218 (SP232) 1.0 1.00 1.0 1.00 1.0 47.0 68.50 110.0 178.75 244.0
Prevotella sp. HMT306 (SP118) 1.0 1.00 1.0 1.00 12.0 99.0 136.25 139.5 161.00 215.0
Lancefieldella parvula (SP174) 1.0 1.00 1.0 1.00 4.0 55.0 72.75 100.0 133.25 157.0
Streptococcus multispecies_sppn11_2_nov_97.976% (SPPN11) 1.0 1.00 1.0 1.00 4.0 41.0 44.75 66.0 88.25 117.0
Riemerella sp. HMT322 (SP51) 1.0 1.00 1.0 1.75 13.0 133.0 153.50 169.0 219.50 305.0
Peptostreptococcus stomatis (SP321) 1.0 1.00 1.0 1.00 1.0 35.0 45.50 51.0 53.25 62.0
Schaalia lingnae (SP49) 1.0 1.00 1.0 1.00 5.0 78.0 95.00 109.5 120.75 135.0
Prevotella sp. HMT443 (SP73) 1.0 1.00 1.0 1.00 1.0 26.0 32.25 73.5 99.75 156.0
Lachnoanaerobaculum orale (SP220) 1.0 1.00 1.0 1.00 1.0 19.0 48.00 51.5 61.25 90.0
Selenomonas sp. HMT136 (SP121) 1.0 1.00 1.0 1.00 4.0 26.0 47.75 63.0 105.00 265.0
Megasphaera micronuciformis (SP167) 1.0 1.00 1.0 1.00 4.0 30.0 46.75 55.0 62.25 69.0
Lachnoanaerobaculum gingivalis (SP20) 1.0 1.00 1.0 1.00 1.0 16.0 30.75 60.0 97.50 120.0
Prevotella jejuni (SP143) 1.0 1.00 1.0 8.25 24.0 256.0 270.50 364.0 461.75 745.0
Aggregatibacter sp. HMT513 (SP252) 1.0 76.25 121.0 161.00 318.0 1.0 16.75 21.0 25.25 75.0
Solobacterium moorei (SP9) 1.0 1.00 1.0 1.00 14.0 70.0 90.75 101.5 138.25 189.0
Actinomyces graevenitzii (SP42) 1.0 1.00 1.0 1.00 1.0 23.0 32.50 61.5 111.50 142.0
Prevotella sp. HMT305 nov_93.865% (SPN148) 1.0 1.00 1.0 2.00 10.0 92.0 163.75 195.5 209.25 243.0
Alloprevotella sp. HMT473 nov_97.347% (SPN70) 1.0 1.00 1.0 12.75 73.0 377.0 482.50 547.5 586.00 716.0
Streptococcus sp. HMT061 (SP366) 1.0 1.00 1.0 1.00 7.0 62.0 78.25 84.0 95.50 118.0
Tannerella serpentiformis (SP441) 1.0 1.00 1.0 1.00 1.0 22.0 33.50 45.5 63.50 314.0
Ottowia sp. HMT894 (SP333) 1.0 1.00 1.0 1.00 1.0 28.0 31.50 34.5 56.75 116.0
Alloprevotella tannerae (SP315) 1.0 1.00 1.0 7.75 38.0 169.0 201.00 271.0 385.25 436.0
Stomatobaculum sp. HMT097 (SP5) 1.0 1.00 1.0 1.00 1.0 14.0 35.75 45.0 56.00 80.0
Prevotella nigrescens (SP98) 1.0 1.00 1.0 1.00 13.0 54.0 104.00 118.5 150.00 173.0
Prevotella sp. HMT309 (SP258) 1.0 1.00 1.0 1.00 1.0 18.0 26.75 44.5 68.75 119.0
Prevotella aurantiaca (SP288) 1.0 1.00 1.0 4.25 12.0 73.0 148.25 203.0 234.25 253.0
Porphyromonas endodontalis (SP306) 1.0 1.00 1.0 1.00 1.0 16.0 28.00 40.5 45.00 54.0
Prevotella vespertina (SP204) 1.0 1.00 1.0 1.00 22.0 36.0 43.75 174.5 329.00 446.0
Prevotella histicola (SP79) 1.0 1.00 1.0 15.00 35.0 231.0 292.75 334.5 531.50 757.0
Prevotella scopos (SP209) 1.0 1.00 1.0 1.00 9.0 22.0 34.25 56.5 98.50 106.0
Streptococcus sp. HMT074 (SP12) 1.0 1.00 1.0 1.00 6.0 21.0 32.75 47.5 65.00 79.0
Cardiobacterium hominis (SP468) 1.0 1.00 1.0 1.00 1.0 20.0 21.00 22.5 24.25 39.0
Prevotella pleuritidis (SP492) 1.0 1.00 1.0 1.00 1.0 13.0 21.50 25.0 35.00 38.0
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP422) 1.0 1.00 1.0 1.00 1.0 18.0 24.50 28.5 31.25 33.0
Alloprevotella sp. HMT914 (SP126) 1.0 1.00 1.0 10.25 31.0 146.0 155.75 214.0 353.50 404.0
Mogibacterium diversum (SP83) 1.0 1.00 1.0 1.00 1.0 13.0 18.50 24.5 34.75 50.0
Prevotella oris (SP13) 1.0 1.00 1.0 1.00 21.0 42.0 73.00 95.0 104.25 109.0
Schaalia sp. HMT180 (SP109) 1.0 1.00 1.0 1.00 10.0 9.0 49.50 103.5 147.50 174.0
Absconditabacteria_(SR1)_[G-1] bacterium HMT875 (SP553) 1.0 1.00 1.0 12.25 22.0 106.0 126.00 200.5 379.50 507.0
Leptotrichia hongkongensis (SP575) 1.0 1.00 1.0 1.00 4.0 15.0 19.75 33.0 44.00 48.0
Streptococcus koreensis (SP280) 1.0 1.00 1.0 1.00 1.0 11.0 14.00 20.5 34.00 43.0
Ruminococcaceae_[G-2] bacterium HMT085 (SP436) 1.0 1.00 1.0 1.00 9.0 29.0 40.25 56.0 66.00 89.0
Parvimonas multispecies_sppn3_2_nov_96.842% (SPPN3) 1.0 1.00 1.0 1.00 1.0 11.0 13.75 18.5 22.00 36.0
Actinomyces sp. HMT448 (SP263) 1.0 1.00 1.0 1.00 1.0 12.0 16.00 32.5 39.50 44.0
Actinomyces massiliensis (SP374) 1.0 1.00 1.0 1.00 1.0 12.0 12.00 14.5 18.50 26.0
Leptotrichia sp. HMT392 (SP430) 1.0 1.00 1.0 1.00 1.0 12.0 14.00 20.5 28.00 102.0
Prevotella sp. HMT315 (SP311) 1.0 1.00 1.0 1.00 1.0 11.0 14.50 16.0 19.25 21.0
Arachnia propionica (SP275) 1.0 1.00 1.0 1.00 1.0 8.0 11.25 13.5 15.75 25.0
Dialister invisus (SP454) 1.0 1.00 1.0 1.00 5.0 16.0 21.00 26.0 33.00 59.0
Prevotella oulorum (SP414) 1.0 1.00 1.0 1.00 1.0 7.0 10.75 12.5 22.50 29.0
Streptococcus multispecies_spp53_2 (SPP53) 1.0 1.00 1.0 1.50 11.0 45.0 51.00 65.0 95.25 110.0
Peptidiphaga sp. HMT183 (SP394) 1.0 1.00 1.0 1.00 1.0 5.0 7.00 8.5 10.25 14.0
Streptococcus sp. HMT057 (SP103) 1.0 1.00 1.0 1.00 1.0 3.0 15.00 18.0 23.25 28.0
Weeksellaceae_[G-1] sp. HMT931 (SP122) 1.0 1.00 1.0 1.00 1.0 8.0 9.75 12.0 14.00 22.0
Bacteroidales_[G-2] bacterium HMT274 (SP295) 1.0 1.00 1.0 1.00 7.0 12.0 16.25 24.5 30.25 85.0
Fusobacterium nucleatum_subsp._vincentii (SP323) 1.0 1.00 1.0 1.00 1.0 1.0 18.25 22.5 29.50 72.0
Lachnospiraceae_[G-3] bacterium HMT100 (SP78) 1.0 1.00 1.0 1.00 1.0 7.0 11.50 17.0 32.75 91.0
Prevotella sp. HMT300 (SP298) 1.0 1.00 1.0 1.00 7.0 8.0 18.50 26.5 34.00 43.0
Streptococcus sanguinis (SP179) 1.0 1.00 1.0 7.00 12.0 61.0 85.75 107.0 138.25 153.0
Moraxella boevrei_nov_92.575% (SPN55) 1.0 1.00 1.0 1.00 3.0 7.0 8.75 12.0 13.75 28.0
Prevotella sp. HMT475 (SP50) 1.0 1.00 1.0 1.00 4.0 4.0 12.75 25.5 36.00 62.0
Butyrivibrio sp. HMT455 (SP273) 1.0 1.00 1.0 1.00 1.0 5.0 6.00 8.0 11.25 19.0
Corynebacterium matruchotii (SP170) 1.0 1.00 1.0 1.00 1.0 1.0 15.75 23.5 28.25 32.0
Leptotrichia sp. HMT225 (SP520) 1.0 1.00 1.0 1.00 1.0 1.0 25.00 31.5 46.25 113.0
Ruminococcaceae_[G-1] bacterium HMT075 (SP64) 1.0 1.00 1.0 1.00 11.0 15.0 19.50 21.0 29.75 94.0
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