QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 122
Klebsiella pneumoniae (SP63) 120
Salmonella enterica (SP178) 117
Neisseria perflava (SP94) 117
Citrobacter koseri (SP26) 117
Neisseria mucosa (SP346) 111
Aggregatibacter segnis (SP111) 110
Prevotella melaninogenica (SP120) 110
Campylobacter concisus (SP45) 110
Enterobacter mori_nov_97.951% (SPN106) 110
Enterobacter cancerogenus (SP184) 109
Veillonella tobetsuensis (SP107) 109
Enterobacter asburiae (SP199) 109
Neisseria elongata (SP145) 107
Raoultella planticola (SP69) 107
Neisseria subflava (SP200) 107
Neisseria flava (SP53) 107
Klebsiella aerogenes (SP327) 107
Enterobacter mori (SP330) 107
Staphylococcus multispecies_spp18_3 (SPP18) 106
Sphingobium yanoikuyae (SP502) 105
Acidovorax temperans (SP203) 105
Raoultella multispecies_spp35_2 (SPP35) 105
Campylobacter concisus_nov_96.963% (SPN15) 104
Cutibacterium acnes (SP222) 103
Enterobacter kobei (SP85) 102
Acinetobacter junii (SP112) 101
Leptotrichia sp. HMT417 (SP185) 101
Aggregatibacter sp. HMT513 (SP252) 100
Agrobacterium tumefaciens (SP369) 100
Veillonella atypica (SP35) 100
Delftia lacustris (SP250) 99
Enterobacter hormaechei (SP231) 98
Haemophilus sputorum (SP371) 98
Acinetobacter johnsonii (SP62) 98
Mycolicibacterium multispecies_spp31_2 (SPP31) 97
Phyllobacterium myrsinacearum (SP44) 97
Haemophilus sp. HMT036 (SP188) 95
Aggregatibacter aphrophilus (SP84) 94
Eikenella corrodens (SP104) 93
Gemella sanguinis (SP285) 92
Fusobacterium periodonticum (SP130) 92
Haemophilus parainfluenzae (SP14) 92
Aggregatibacter sp. HMT458 (SP136) 91
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final I +PMA Final I +PMA Final I +PMA Final I +PMA Final I +PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 1.0 1.00 15.0
Klebsiella pneumoniae (SP63) 1.0 7.00 35.5 239.75 1996.0 1.0 1041.75 3190.0 19686.25 63037.0
Salmonella enterica (SP178) 1.0 1.00 1.0 1.00 1771.0 1.0 1.00 3802.0 7040.75 12766.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.00 1.0 16.50 529.0
Citrobacter koseri (SP26) 1.0 1.00 1.0 38.75 10239.0 1.0 1.00 21701.0 37693.00 68306.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 1.00 241.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 1.0 1.00 28.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 1.0 1.00 31.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 1.00 1.0 2.50 500.0
Enterobacter mori_nov_97.951% (SPN106) 1.0 1.00 1.0 1.00 1172.0 1.0 1.00 1.0 317.50 6756.0
Enterobacter cancerogenus (SP184) 1.0 1.00 1.0 1.00 5393.0 1.0 1.00 1.0 1650.50 34073.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 1.0 1.00 31.0
Enterobacter asburiae (SP199) 1.0 1.00 1.0 1.00 2607.0 1.0 1.00 1.0 701.00 15547.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 1.0 1.75 154.0
Raoultella planticola (SP69) 1.0 1.00 1.0 1.00 1262.0 1.0 1.00 1.0 950.25 29771.0
Neisseria subflava (SP200) 321.0 725.00 864.0 1114.00 2128.0 1.0 1.00 1.0 21.25 445.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 1.00 21.5 92.25 1615.0
Klebsiella aerogenes (SP327) 1.0 1.00 1.0 1.00 1268.0 1.0 1.00 1.0 1269.75 35096.0
Enterobacter mori (SP330) 1.0 1.00 1.0 1.00 1168.0 1.0 1.00 1.0 205.50 7978.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 30.0 1.0 1.00 3.0 12.75 470.0
Sphingobium yanoikuyae (SP502) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 8.0
Acidovorax temperans (SP203) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 7.0
Raoultella multispecies_spp35_2 (SPP35) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 6199.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 1.0 1.00 25.0
Cutibacterium acnes (SP222) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 1.0 1.00 796.0
Enterobacter kobei (SP85) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 121.0
Acinetobacter junii (SP112) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 512.0
Leptotrichia sp. HMT417 (SP185) 1.0 1.00 1.0 1.00 7.0 1.0 1.00 1.0 1.00 1.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 1.00 9.0
Agrobacterium tumefaciens (SP369) 1.0 1.00 1.0 1.00 5.0 1.0 1.00 1.0 1.00 5.0
Veillonella atypica (SP35) 39.0 523.00 974.0 2635.50 5770.0 1.0 1.00 1.0 45.00 470.0
Delftia lacustris (SP250) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 844.0
Enterobacter hormaechei (SP231) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 48003.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 1.0 1.00 1.0
Acinetobacter johnsonii (SP62) 1.0 1.00 1.0 1.00 8.0 1.0 1.00 1.0 1.00 1090.0
Mycolicibacterium multispecies_spp31_2 (SPP31) 1.0 1.00 1.0 1.00 5.0 1.0 1.00 1.0 1.00 66.0
Phyllobacterium myrsinacearum (SP44) 1.0 1.00 1.0 1.00 10.0 1.0 1.00 1.0 1.00 767.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 1.00 1.0
Aggregatibacter aphrophilus (SP84) 1.0 66.50 139.0 325.50 1695.0 1.0 1.00 1.0 1.00 71.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.00 1.0 10.50 603.0
Gemella sanguinis (SP285) 1.0 13.75 105.5 421.50 721.0 1.0 1.00 1.0 1.00 42.0
Fusobacterium periodonticum (SP130) 14.0 151.25 661.0 2033.25 6726.0 1.0 1.00 1.0 20.75 527.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 6.25 214.0 1124.50 34247.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 1.00 1.0
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