QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus mitis (SP249) 133
Veillonella parvula (SP2) 133
Veillonella atypica (SP35) 133
Rothia dentocariosa (SP201) 133
Veillonella rogosae (SP90) 133
Streptococcus oralis (SP80) 133
Veillonella multispecies_spp25_2 (SPP25) 133
Streptococcus sp. HMT423 (SP4) 132
Neisseria perflava (SP94) 132
Neisseria mucosa (SP346) 131
Neisseria flava (SP53) 131
Klebsiella pneumoniae (SP63) 130
Neisseria elongata (SP145) 129
Prevotella melaninogenica (SP120) 127
Fusobacterium nucleatum (SP56) 127
Haemophilus parainfluenzae (SP14) 123
Streptococcus salivarius (SP89) 122
Campylobacter concisus (SP45) 121
Campylobacter showae (SP265) 120
Veillonella multispecies_spp6_3 (SPP6) 119
Fusobacterium periodonticum (SP130) 119
Haemophilus pittmaniae (SP169) 118
Streptococcus sanguinis (SP179) 116
Veillonella tobetsuensis (SP107) 115
Veillonella dispar (SP3) 115
Haemophilus sputorum (SP371) 115
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 115
Streptococcus sp. HMT064 (SP443) 113
Staphylococcus multispecies_spp18_3 (SPP18) 112
Rothia mucilaginosa (SP391) 112
Campylobacter concisus_nov_96.963% (SPN15) 112
Eikenella corrodens (SP104) 110
Leptotrichia sp. HMT215 (SP40) 110
Streptococcus gordonii (SP144) 110
Solobacterium moorei (SP9) 108
Fusobacterium sp. HMT204 (SP343) 105
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 105
Aggregatibacter aphrophilus (SP84) 104
Porphyromonas pasteri (SP34) 101
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group A Final -PMA A Final -PMA A Final -PMA A Final -PMA A Final -PMA B Final -PMA B Final -PMA B Final -PMA B Final -PMA B Final -PMA C Final -PMA C Final -PMA C Final -PMA C Final -PMA C Final -PMA D Final -PMA D Final -PMA D Final -PMA D Final -PMA D Final -PMA E Final -PMA E Final -PMA E Final -PMA E Final -PMA E Final -PMA
Streptococcus mitis (SP249) 1.0 1.00 11.5 60.75 241.0 1.0 1.00 17.5 102.00 279.0 1.0 1.00 1.0 1.00 67.0 1.0 1.00 16.0 25.75 136.0 1.0 39.25 69.5 236.00 2865.0
Veillonella parvula (SP2) 119.0 1517.50 1742.5 2012.00 3906.0 1.0 1.00 284.0 1586.75 2251.0 1.0 92.00 651.5 1202.25 2108.0 20.0 1002.50 1394.5 1720.25 2019.0 1.0 20.25 893.5 1468.25 2001.0
Veillonella atypica (SP35) 1.0 1822.75 2674.5 3970.00 5983.0 1.0 1.00 215.5 1829.00 4339.0 37.0 155.75 478.5 1426.50 3498.0 53.0 1147.25 1785.5 2631.50 3888.0 1.0 69.75 611.5 2014.75 3611.0
Rothia dentocariosa (SP201) 9.0 40.50 50.5 60.25 440.0 1.0 1.00 70.5 123.00 257.0 149.0 351.00 503.5 2804.50 10794.0 1.0 27.75 123.0 163.25 325.0 12.0 148.75 193.0 364.25 14478.0
Veillonella rogosae (SP90) 35.0 459.00 609.0 929.25 1336.0 1.0 1.00 167.0 1242.00 2117.0 52.0 322.50 710.0 1115.25 1964.0 100.0 992.00 1435.0 2984.50 6059.0 1.0 59.75 618.5 866.00 1284.0
Streptococcus oralis (SP80) 28.0 141.00 245.0 360.25 955.0 1.0 96.50 180.0 289.00 535.0 1.0 83.25 209.0 416.00 4650.0 1.0 14.75 56.0 150.25 443.0 54.0 200.75 347.5 4051.75 27206.0
Veillonella multispecies_spp25_2 (SPP25) 643.0 7418.00 8807.0 11487.25 20319.0 1.0 1.00 839.0 6843.75 11377.0 58.0 644.50 3035.0 5276.25 10130.0 148.0 3910.25 6848.5 7831.25 9422.0 27.0 204.75 4419.5 7404.50 10687.0
Streptococcus sp. HMT423 (SP4) 1034.0 1635.75 4202.0 6424.50 37637.0 364.0 1421.25 2545.0 5243.00 8370.0 2503.0 4676.25 10088.0 14907.00 21357.0 1.0 42.00 663.0 2608.00 4342.0 1426.0 4627.50 10064.5 60670.00 87731.0
Neisseria perflava (SP94) 1.0 168.00 503.0 792.25 2488.0 1.0 1.00 581.0 1827.50 3048.0 1.0 308.50 721.5 1670.00 5780.0 124.0 1314.25 1746.0 2390.75 5545.0 37.0 144.25 1221.0 1812.75 2679.0
Neisseria mucosa (SP346) 1.0 1.00 1.0 54.00 153.0 1.0 1.00 1.0 171.25 1539.0 1.0 1.00 36.0 85.50 204.0 1.0 77.50 150.5 400.25 686.0 1.0 1.00 1.0 153.00 422.0
Neisseria flava (SP53) 1.0 161.50 698.0 1229.50 2804.0 1.0 15.00 526.0 863.50 2702.0 58.0 448.00 653.0 1520.00 4142.0 399.0 928.25 1342.0 1748.00 14713.0 32.0 387.25 887.5 1861.50 3635.0
Klebsiella pneumoniae (SP63) 1.0 15.75 107.5 542.50 1998.0 1.0 143.50 931.5 6043.75 29790.0 1.0 9.75 103.5 2986.75 35591.0 1.0 6.75 44.5 290.50 35011.0 1.0 1.00 7.0 22.75 1363.0
Neisseria elongata (SP145) 1.0 7.50 27.5 52.25 140.0 1.0 1.00 7.5 96.25 410.0 1.0 5.75 60.5 88.00 188.0 13.0 97.50 150.0 221.25 693.0 1.0 11.75 75.5 150.00 432.0
Prevotella melaninogenica (SP120) 1.0 61.00 262.5 436.00 788.0 1.0 1.00 1.0 17.50 446.0 1.0 1.00 6.5 32.25 194.0 1.0 17.25 34.0 98.75 450.0 1.0 1.00 4.0 22.50 95.0
Fusobacterium nucleatum (SP56) 1.0 86.25 240.0 979.25 7651.0 1.0 1.00 1.0 22.75 545.0 1.0 1.00 1.0 50.75 121.0 1.0 1.00 31.5 127.25 599.0 1.0 1.00 2.5 93.50 484.0
Haemophilus parainfluenzae (SP14) 1.0 7434.50 9481.0 13155.00 16169.0 1.0 1.00 3910.0 9119.00 17787.0 17.0 197.75 2940.5 7564.25 12644.0 84.0 2125.50 6909.0 11926.00 14058.0 74.0 251.75 4490.5 11965.25 14408.0
Streptococcus salivarius (SP89) 1.0 1316.50 2502.5 3788.00 4885.0 1.0 670.25 4109.0 5841.50 13243.0 1.0 779.50 2691.0 3966.75 10303.0 1.0 13.25 604.0 1866.75 3004.0 1.0 5.50 692.0 1900.75 3057.0
Campylobacter concisus (SP45) 1.0 172.50 332.0 610.00 1569.0 1.0 1.00 24.5 125.25 490.0 1.0 2.50 41.5 119.00 297.0 9.0 99.00 277.5 496.25 1002.0 1.0 20.25 71.0 486.00 1325.0
Campylobacter showae (SP265) 1.0 23.75 71.0 217.00 834.0 1.0 1.00 1.0 21.25 154.0 1.0 1.00 1.0 8.00 30.0 1.0 13.25 23.5 40.00 159.0 1.0 3.00 18.0 34.50 106.0
Veillonella multispecies_spp6_3 (SPP6) 1.0 167.25 191.0 260.25 412.0 1.0 1.00 105.0 341.75 587.0 1.0 65.75 136.0 318.00 456.0 36.0 255.50 347.0 521.00 881.0 1.0 13.75 141.5 214.00 370.0
Fusobacterium periodonticum (SP130) 1.0 1095.00 2100.5 4639.75 9527.0 1.0 1.00 90.5 938.00 2290.0 1.0 1.00 109.0 827.00 2136.0 1.0 214.25 965.5 1360.25 2544.0 12.0 30.00 152.5 2655.00 3861.0
Haemophilus pittmaniae (SP169) 1.0 62.75 206.5 383.25 923.0 1.0 1.00 1.0 72.25 521.0 1.0 1.00 11.0 130.25 291.0 1.0 1.00 12.0 77.25 358.0 1.0 1.00 21.5 137.75 578.0
Streptococcus sanguinis (SP179) 373.0 584.50 1161.0 1661.75 8884.0 1.0 20.00 852.0 1084.75 2987.0 1.0 73.50 782.0 1097.50 6144.0 1.0 62.00 254.5 610.75 1217.0 1.0 1.00 280.5 522.00 2233.0
Veillonella tobetsuensis (SP107) 1.0 42.75 93.0 161.00 331.0 1.0 1.00 36.0 155.50 280.0 1.0 15.00 63.5 142.75 178.0 15.0 129.00 170.5 329.00 427.0 1.0 5.75 64.5 152.25 286.0
Veillonella dispar (SP3) 1.0 114.00 133.0 188.50 359.0 1.0 1.00 78.5 285.00 657.0 1.0 18.50 119.5 206.75 767.0 23.0 205.50 262.0 406.75 1087.0 1.0 1.00 130.5 169.25 301.0
Haemophilus sputorum (SP371) 1.0 4.75 14.0 23.50 92.0 1.0 1.00 1.0 23.75 220.0 1.0 1.00 7.0 23.00 64.0 1.0 19.75 39.0 83.25 886.0 1.0 7.50 18.0 42.00 100.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP82) 1.0 4.75 131.0 242.00 2748.0 1.0 19.75 109.0 205.25 552.0 1.0 38.50 196.0 412.75 2834.0 1.0 5.00 13.5 65.00 198.0 1.0 21.00 135.5 235.75 1285.0
Streptococcus sp. HMT064 (SP443) 1.0 1.00 51.0 83.00 3869.0 1.0 1.00 21.5 102.00 228.0 1.0 8.50 96.0 312.50 6337.0 1.0 1.00 1.0 40.75 149.0 1.0 1.00 114.5 547.50 7421.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 14.0 1.0 1.00 8.0 38.00 874.0 1.0 1.00 1.0 24.75 1556.0 1.0 1.00 1.0 6.50 26.0 1.0 1.00 1.0 6.25 64.0
Rothia mucilaginosa (SP391) 1.0 9.50 35.0 94.25 225.0 1.0 1.00 120.0 254.50 1284.0 11.0 65.00 155.0 224.75 663.0 14.0 90.75 150.5 208.25 890.0 1.0 7.00 83.0 137.25 312.0
Campylobacter concisus_nov_96.963% (SPN15) 1.0 26.75 46.5 65.25 90.0 1.0 1.00 2.5 26.25 124.0 1.0 1.00 4.5 29.75 59.0 1.0 25.75 60.0 111.25 193.0 1.0 6.75 22.5 78.75 191.0
Eikenella corrodens (SP104) 1.0 646.50 824.5 965.00 1554.0 1.0 1.00 40.5 389.25 2350.0 1.0 3.25 199.0 610.25 961.0 1.0 86.50 223.5 491.50 1470.0 1.0 14.00 155.5 837.25 1507.0
Leptotrichia sp. HMT215 (SP40) 1.0 112.75 218.5 582.50 1058.0 1.0 1.00 14.0 123.00 408.0 1.0 1.00 35.0 132.50 188.0 1.0 62.50 110.5 234.00 433.0 1.0 7.75 51.0 256.50 629.0
Streptococcus gordonii (SP144) 357.0 595.75 785.0 1066.75 4373.0 1.0 1.00 330.5 1032.50 1599.0 1.0 1.00 475.5 822.00 1257.0 1.0 41.50 303.0 653.00 1783.0 1.0 1.00 284.5 577.50 2040.0
Solobacterium moorei (SP9) 1.0 13.75 29.0 66.00 175.0 1.0 1.00 13.5 25.25 79.0 1.0 1.00 4.0 11.00 21.0 1.0 8.75 29.5 114.75 204.0 1.0 2.50 8.0 22.25 35.0
Fusobacterium sp. HMT204 (SP343) 1.0 4.00 26.0 79.50 352.0 1.0 1.00 1.0 1.00 49.0 1.0 1.00 1.0 7.25 24.0 1.0 1.00 1.0 12.50 59.0 1.0 1.00 1.0 13.50 77.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 1.0 1.00 9.0 33.50 321.0 1.0 1.00 17.5 32.75 88.0 1.0 1.00 11.5 21.00 78.0 1.0 1.00 12.0 24.25 126.0 1.0 11.00 33.5 126.50 3251.0
Aggregatibacter aphrophilus (SP84) 1.0 145.75 242.0 571.50 1063.0 1.0 1.00 1.0 222.25 2662.0 1.0 3.25 34.0 155.25 561.0 1.0 42.75 97.5 229.00 1175.0 1.0 16.75 128.5 348.50 837.0
Porphyromonas pasteri (SP34) 1.0 86.00 157.0 283.75 528.0 1.0 1.00 9.0 68.25 934.0 1.0 1.00 46.5 174.75 361.0 1.0 86.00 177.5 538.50 1008.0 1.0 1.00 148.0 469.75 1123.0
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