QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Porphyromonas pasteri (SP34) 129
Campylobacter concisus (SP45) 120
Klebsiella pneumoniae (SP63) 116
Prevotella melaninogenica (SP120) 116
Aggregatibacter segnis (SP111) 114
Salmonella enterica (SP178) 114
Citrobacter koseri (SP26) 114
Neisseria elongata (SP145) 113
Campylobacter concisus_nov_96.963% (SPN15) 111
Staphylococcus multispecies_spp18_3 (SPP18) 110
Veillonella tobetsuensis (SP107) 108
Veillonella parvula (SP2) 108
Cutibacterium acnes (SP222) 108
Veillonella rogosae (SP90) 107
Aggregatibacter sp. HMT513 (SP252) 107
Neisseria mucosa (SP346) 107
Veillonella multispecies_spp6_3 (SPP6) 107
Veillonella multispecies_spp25_2 (SPP25) 107
Fusobacterium periodonticum (SP130) 106
Veillonella dispar (SP3) 105
Haemophilus sputorum (SP371) 104
Veillonella atypica (SP35) 102
Eikenella corrodens (SP104) 100
Haemophilus sp. HMT036 (SP188) 100
Haemophilus haemolyticus (SP163) 99
Haemophilus parainfluenzae (SP14) 98
Klebsiella aerogenes (SP327) 97
Enterobacter mori (SP330) 97
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final H +PMA Final H +PMA Final H +PMA Final H +PMA Final H +PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 1.0 1.75 62.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 1.00 1.0 1.00 47.0
Klebsiella pneumoniae (SP63) 1.0 7.00 35.5 239.75 1996.0 1.0 91.75 1986.0 5677.50 68814.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 1.0 1.00 497.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 1.0 7.00 224.0
Salmonella enterica (SP178) 1.0 1.00 1.0 1.00 1771.0 1.0 1.00 32.5 6151.50 11349.0
Citrobacter koseri (SP26) 1.0 1.00 1.0 38.75 10239.0 1.0 1.00 1673.5 32628.00 58393.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 1.0 8.00 128.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 1.0 1.00 6.0
Staphylococcus multispecies_spp18_3 (SPP18) 1.0 1.00 1.0 3.25 30.0 1.0 1.00 3.5 77.00 1629.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 1.0 2.50 114.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.00 5.0 30.50 4232.0
Cutibacterium acnes (SP222) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 1.0 18.25 136.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.00 20.0 136.25 4106.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 1.00 25.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 15.50 742.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.00 1.0 29.75 204.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 1.00 73.0 420.00 4989.0
Fusobacterium periodonticum (SP130) 14.0 151.25 661.0 2033.25 6726.0 1.0 1.00 2.5 22.25 268.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 1.0 5.75 1613.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 1.0 1.00 4.0
Veillonella atypica (SP35) 39.0 523.00 974.0 2635.50 5770.0 1.0 1.00 6.0 85.25 1554.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.00 5.0 24.25 223.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 1.00 8.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 1.00 15.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 8.25 157.5 1673.75 7495.0
Klebsiella aerogenes (SP327) 1.0 1.00 1.0 1.00 1268.0 1.0 1.00 1.0 194.50 33013.0
Enterobacter mori (SP330) 1.0 1.00 1.0 1.00 1168.0 1.0 1.00 1.0 179.50 6843.0
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